RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 FAM9BQ8IZU0 186 aa16.23■□□□□ 0.19
SEC23B-204ENST00000377475 TONSLQ96HA7 1378 aa16.21■□□□□ 0.19
SEC23B-204ENST00000377475 CUX2O14529 1486 aa16.19■□□□□ 0.18
SEC23B-204ENST00000377475 FOXD1Q16676 465 aa16.18■□□□□ 0.18
SEC23B-204ENST00000377475 CLSPNQ9HAW4 1339 aa16.18■□□□□ 0.18
SEC23B-204ENST00000377475 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
SEC23B-204ENST00000377475 ANP32EQ9BTT0 268 aa16.17■□□□□ 0.18
SEC23B-204ENST00000377475 RBM19Q9Y4C8 960 aaKnown RBP16.14■□□□□ 0.17
SEC23B-204ENST00000377475 CARMIL1Q5VZK9 1371 aa16.12■□□□□ 0.17
SEC23B-204ENST00000377475 SETD5Q9C0A6 1442 aa16.11■□□□□ 0.17
SEC23B-204ENST00000377475 PHLDB1Q86UU1 1377 aa16.11■□□□□ 0.17
SEC23B-204ENST00000377475 PPP1R15AO75807 674 aaPredicted RBP16.09■□□□□ 0.17
SEC23B-204ENST00000377475 SALL2Q9Y467 1007 aaPredicted RBP16.08■□□□□ 0.16
SEC23B-204ENST00000377475 FHOD3Q2V2M9 1422 aa16.08■□□□□ 0.16
SEC23B-204ENST00000377475 MTUS2Q5JR59 1369 aa16.08■□□□□ 0.16
SEC23B-204ENST00000377475 CDK11AQ9UQ88 783 aaPredicted RBP16.07■□□□□ 0.16
SEC23B-204ENST00000377475 ARHGAP35Q9NRY4 1499 aa16.06■□□□□ 0.16
SEC23B-204ENST00000377475 B4GALNT3Q6L9W6 998 aa16.03■□□□□ 0.16
SEC23B-204ENST00000377475 ZNF777Q9ULD5 760 aaPredicted RBP16.03■□□□□ 0.16
SEC23B-204ENST00000377475 PRXQ9BXM0 1461 aa16.03■□□□□ 0.16
SEC23B-204ENST00000377475 IGF1RP08069 1367 aa16.03■□□□□ 0.16
SEC23B-204ENST00000377475 MRS2Q9HD23 443 aa16.02■□□□□ 0.15
SEC23B-204ENST00000377475 WDR97A6NE52 1622 aa16■□□□□ 0.15
SEC23B-204ENST00000377475 RRBP1Q9P2E9 1410 aaKnown RBP15.99■□□□□ 0.15
SEC23B-204ENST00000377475 NBR1Q14596 966 aa15.98■□□□□ 0.15
SEC23B-204ENST00000377475 CUX1P39880 1505 aa15.98■□□□□ 0.15
SEC23B-204ENST00000377475 HSPA5P11021 654 aaKnown RBP15.98■□□□□ 0.15
SEC23B-204ENST00000377475 CCDC184Q52MB2 194 aa15.97■□□□□ 0.15
SEC23B-204ENST00000377475 FBLN2P98095 1184 aa15.95■□□□□ 0.14
SEC23B-204ENST00000377475 TDRD9Q8NDG6 1382 aaKnown RBP15.95■□□□□ 0.14
SEC23B-204ENST00000377475 BCL11AQ9H165 835 aa15.94■□□□□ 0.14
SEC23B-204ENST00000377475 TOP2BQ02880 1626 aa15.93■□□□□ 0.14
SEC23B-204ENST00000377475 EIF4G2P78344 907 aaKnown RBP eCLIP15.92■□□□□ 0.14
SEC23B-204ENST00000377475 NPM2Q86SE8 214 aaKnown RBP15.91■□□□□ 0.14
SEC23B-204ENST00000377475 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
SEC23B-204ENST00000377475 KDM2AQ9Y2K7 1162 aa15.9■□□□□ 0.14
SEC23B-204ENST00000377475 LRRC9Q6ZRR7 1453 aa15.88■□□□□ 0.13
SEC23B-204ENST00000377475 CCER2I3L3R5 266 aa15.87■□□□□ 0.13
SEC23B-204ENST00000377475 L3MBTL2Q969R5 705 aa15.87■□□□□ 0.13
SEC23B-204ENST00000377475 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
SEC23B-204ENST00000377475 MAPKBP1O60336 1514 aa15.85■□□□□ 0.13
SEC23B-204ENST00000377475 FGD5Q6ZNL6 1462 aa15.85■□□□□ 0.13
SEC23B-204ENST00000377475 FHAD1B1AJZ9 1412 aa15.84■□□□□ 0.13
SEC23B-204ENST00000377475 MSH5O43196 834 aa15.83■□□□□ 0.13
SEC23B-204ENST00000377475 DNAJC5BQ9UF47 199 aa15.82■□□□□ 0.12
SEC23B-204ENST00000377475 ERICH3Q5RHP9 1530 aa15.82■□□□□ 0.12
SEC23B-204ENST00000377475 WASHC2AQ641Q2 1341 aa15.82■□□□□ 0.12
SEC23B-204ENST00000377475 CADPSQ9ULU8 1353 aa15.81■□□□□ 0.12
SEC23B-204ENST00000377475 C11orf95C9JLR9 678 aaPredicted RBP15.8■□□□□ 0.12
SEC23B-204ENST00000377475 MPHOSPH9Q99550 1183 aa15.79■□□□□ 0.12
SEC23B-204ENST00000377475 CCDC136Q96JN2 1154 aa15.78■□□□□ 0.12
SEC23B-204ENST00000377475 ZNF644Q9H582 1327 aaPredicted RBP15.77■□□□□ 0.12
SEC23B-204ENST00000377475 CCDC18Q5T9S5 1454 aa15.77■□□□□ 0.12
SEC23B-204ENST00000377475 TIAM1Q13009 1591 aa15.75■□□□□ 0.11
SEC23B-204ENST00000377475 CFTRP13569 1480 aa15.75■□□□□ 0.11
SEC23B-204ENST00000377475 TIMELESSQ9UNS1 1208 aa15.74■□□□□ 0.11
SEC23B-204ENST00000377475 PEG3Q9GZU2 1588 aa15.74■□□□□ 0.11
SEC23B-204ENST00000377475 TMC1Q8TDI8 760 aa15.74■□□□□ 0.11
SEC23B-204ENST00000377475 PPP4R2Q9NY27 417 aa15.73■□□□□ 0.11
SEC23B-204ENST00000377475 NCAPD3P42695 1498 aa15.73■□□□□ 0.11
SEC23B-204ENST00000377475 NESP48681 1621 aa15.73■□□□□ 0.11
SEC23B-204ENST00000377475 CC2D2AQ9P2K1 1620 aa15.72■□□□□ 0.11
SEC23B-204ENST00000377475 RGL3Q3MIN7 710 aa15.72■□□□□ 0.11
SEC23B-204ENST00000377475 FGD6Q6ZV73 1430 aa15.71■□□□□ 0.11
SEC23B-204ENST00000377475 PTPRKQ15262 1439 aa15.71■□□□□ 0.11
SEC23B-204ENST00000377475 PRKRIP1Q9H875 184 aaPredicted RBP15.71■□□□□ 0.11
SEC23B-204ENST00000377475 NBPF8Q3BBV2 869 aa15.69■□□□□ 0.1
SEC23B-204ENST00000377475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.69■□□□□ 0.19e-6■■■□□ 18.9
SEC23B-204ENST00000377475 FANCD2Q9BXW9 1451 aa15.68■□□□□ 0.1
SEC23B-204ENST00000377475 AQRO60306 1485 aaKnown RBP eCLIP15.68■□□□□ 0.1
SEC23B-204ENST00000377475 PCF11O94913 1555 aaKnown RBP15.67■□□□□ 0.1
SEC23B-204ENST00000377475 RTL5Q5HYW3 569 aaPredicted RBP15.65■□□□□ 0.1
SEC23B-204ENST00000377475 BIVM-ERCC5R4GMW8 1640 aa15.64■□□□□ 0.09
SEC23B-204ENST00000377475 FMN1Q68DA7 1419 aa15.63■□□□□ 0.09
SEC23B-204ENST00000377475 RTN4Q9NQC3 1192 aaKnown RBP15.63■□□□□ 0.09
SEC23B-204ENST00000377475 CFDP1Q9UEE9 299 aaPredicted RBP15.63■□□□□ 0.09
SEC23B-204ENST00000377475 ANP32AP39687 249 aaKnown RBP15.62■□□□□ 0.09
SEC23B-204ENST00000377475 LAS1LQ9Y4W2 734 aaKnown RBP15.62■□□□□ 0.09
SEC23B-204ENST00000377475 CARD11Q9BXL7 1154 aa15.62■□□□□ 0.09
SEC23B-204ENST00000377475 PAK3O75914 559 aaPredicted RBP15.61■□□□□ 0.09
SEC23B-204ENST00000377475 DEKP35659 375 aaKnown RBP15.61■□□□□ 0.09
SEC23B-204ENST00000377475 PKD2Q13563 968 aa15.61■□□□□ 0.09
SEC23B-204ENST00000377475 UACAQ9BZF9 1416 aa15.61■□□□□ 0.09
SEC23B-204ENST00000377475 KIF7Q2M1P5 1343 aa15.6■□□□□ 0.09
SEC23B-204ENST00000377475 NCOA2Q15596 1464 aa15.6■□□□□ 0.09
SEC23B-204ENST00000377475 NAIPQ13075 1403 aa15.59■□□□□ 0.09
SEC23B-204ENST00000377475 DCAF11Q8TEB1 546 aa15.58■□□□□ 0.09
SEC23B-204ENST00000377475 SENP3Q9H4L4 574 aaPredicted RBP15.58■□□□□ 0.09
SEC23B-204ENST00000377475 CC2D1BQ5T0F9 858 aaKnown RBP15.58■□□□□ 0.08
SEC23B-204ENST00000377475 MYT1LQ9UL68 1186 aa15.58■□□□□ 0.08
SEC23B-204ENST00000377475 SKAP1Q86WV1 359 aa15.58■□□□□ 0.08
SEC23B-204ENST00000377475 ZBTB47Q9UFB7 747 aaPredicted RBP15.58■□□□□ 0.08
SEC23B-204ENST00000377475 AKNAQ7Z591 1439 aa15.57■□□□□ 0.08
SEC23B-204ENST00000377475 NOP58Q9Y2X3 529 aaKnown RBP15.57■□□□□ 0.08
SEC23B-204ENST00000377475 CASKIN1Q8WXD9 1431 aa15.57■□□□□ 0.08
SEC23B-204ENST00000377475 MYOM3Q5VTT5 1437 aa15.55■□□□□ 0.08
SEC23B-204ENST00000377475 CCDC7Q96M83 1385 aa15.55■□□□□ 0.08
SEC23B-204ENST00000377475 PLIN1O60240 522 aa15.55■□□□□ 0.08
SEC23B-204ENST00000377475 POLA1P09884 1462 aaPredicted RBP15.55■□□□□ 0.08
SEC23B-204ENST00000377475 HFM1A2PYH4 1435 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms