RNA–Protein interactions for RNA: ENST00000377255.3

ZKSCAN3-203, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-203ENST00000377255 MRS2Q9HD23 443 aa17.24■□□□□ 0.35
ZKSCAN3-203ENST00000377255 STAG3Q9UJ98 1225 aa17.24■□□□□ 0.35
ZKSCAN3-203ENST00000377255 KDM2AQ9Y2K7 1162 aa17.24■□□□□ 0.35
ZKSCAN3-203ENST00000377255 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
ZKSCAN3-203ENST00000377255 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
ZKSCAN3-203ENST00000377255 CUX2O14529 1486 aa17.2■□□□□ 0.34
ZKSCAN3-203ENST00000377255 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
ZKSCAN3-203ENST00000377255 CFDP1Q9UEE9 299 aaPredicted RBP17.19■□□□□ 0.34
ZKSCAN3-203ENST00000377255 CCNB3Q8WWL7 1395 aa17.19■□□□□ 0.34
ZKSCAN3-203ENST00000377255 VPS8Q8N3P4 1428 aa17.18■□□□□ 0.34
ZKSCAN3-203ENST00000377255 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
ZKSCAN3-203ENST00000377255 ABCC8Q09428 1581 aa17.16■□□□□ 0.34
ZKSCAN3-203ENST00000377255 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
ZKSCAN3-203ENST00000377255 SLC24A1O60721 1099 aa17.14■□□□□ 0.33
ZKSCAN3-203ENST00000377255 WDR43Q15061 677 aaKnown RBP eCLIP17.13■□□□□ 0.33
ZKSCAN3-203ENST00000377255 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
ZKSCAN3-203ENST00000377255 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.12■□□□□ 0.33
ZKSCAN3-203ENST00000377255 KCNH8Q96L42 1107 aa17.12■□□□□ 0.33
ZKSCAN3-203ENST00000377255 CCDC136Q96JN2 1154 aa17.11■□□□□ 0.33
ZKSCAN3-203ENST00000377255 WIZO95785 1651 aa17.11■□□□□ 0.33
ZKSCAN3-203ENST00000377255 TIMELESSQ9UNS1 1208 aa17.09■□□□□ 0.33
ZKSCAN3-203ENST00000377255 NPM2Q86SE8 214 aaKnown RBP17.08■□□□□ 0.33
ZKSCAN3-203ENST00000377255 SIN3AQ96ST3 1273 aa17.06■□□□□ 0.32
ZKSCAN3-203ENST00000377255 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
ZKSCAN3-203ENST00000377255 BCL11AQ9H165 835 aa17.05■□□□□ 0.32
ZKSCAN3-203ENST00000377255 RGL3Q3MIN7 710 aa17.02■□□□□ 0.31
ZKSCAN3-203ENST00000377255 UPF2Q9HAU5 1272 aaKnown RBP17.01■□□□□ 0.31
ZKSCAN3-203ENST00000377255 CDCA8Q53HL2 280 aa17■□□□□ 0.31
ZKSCAN3-203ENST00000377255 SETD5Q9C0A6 1442 aa16.99■□□□□ 0.31
ZKSCAN3-203ENST00000377255 CARD11Q9BXL7 1154 aa16.99■□□□□ 0.31
ZKSCAN3-203ENST00000377255 PDS5BQ9NTI5 1447 aa16.99■□□□□ 0.31
ZKSCAN3-203ENST00000377255 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
ZKSCAN3-203ENST00000377255 KANK4Q5T7N3 995 aaPredicted RBP16.98■□□□□ 0.31
ZKSCAN3-203ENST00000377255 ARHGAP35Q9NRY4 1499 aa16.97■□□□□ 0.31
ZKSCAN3-203ENST00000377255 ATAD2BQ9ULI0 1458 aa16.96■□□□□ 0.31
ZKSCAN3-203ENST00000377255 SMARCA4P51532 1647 aa16.96■□□□□ 0.3
ZKSCAN3-203ENST00000377255 FMN1Q68DA7 1419 aa16.94■□□□□ 0.3
ZKSCAN3-203ENST00000377255 IRX6P78412 446 aaPredicted RBP16.94■□□□□ 0.3
ZKSCAN3-203ENST00000377255 CADPSQ9ULU8 1353 aa16.94■□□□□ 0.3
ZKSCAN3-203ENST00000377255 KNSTRNQ9Y448 316 aa16.91■□□□□ 0.3
ZKSCAN3-203ENST00000377255 PLPPR3Q6T4P5 718 aa16.88■□□□□ 0.29
ZKSCAN3-203ENST00000377255 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
ZKSCAN3-203ENST00000377255 HSP90AA1P07900 732 aaKnown RBP16.88■□□□□ 0.29
ZKSCAN3-203ENST00000377255 RAPGEF2Q9Y4G8 1499 aa16.88■□□□□ 0.29
ZKSCAN3-203ENST00000377255 PPP1R15AO75807 674 aaPredicted RBP16.86■□□□□ 0.29
ZKSCAN3-203ENST00000377255 CARMIL2Q6F5E8 1435 aa16.85■□□□□ 0.29
ZKSCAN3-203ENST00000377255 CFAP53Q96M91 514 aa16.85■□□□□ 0.29
ZKSCAN3-203ENST00000377255 RAB3GAP2Q9H2M9 1393 aa16.85■□□□□ 0.29
ZKSCAN3-203ENST00000377255 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
ZKSCAN3-203ENST00000377255 CCER2I3L3R5 266 aa16.83■□□□□ 0.29
ZKSCAN3-203ENST00000377255 DCAF11Q8TEB1 546 aa16.79■□□□□ 0.28
ZKSCAN3-203ENST00000377255 ANP32BQ92688 251 aaKnown RBP16.77■□□□□ 0.27
ZKSCAN3-203ENST00000377255 MYH16Q9H6N6 1097 aa16.76■□□□□ 0.27
ZKSCAN3-203ENST00000377255 TMF1P82094 1093 aa16.76■□□□□ 0.27
ZKSCAN3-203ENST00000377255 KANK1Q14678 1352 aa16.76■□□□□ 0.27
ZKSCAN3-203ENST00000377255 PPP4R2Q9NY27 417 aa16.76■□□□□ 0.27
ZKSCAN3-203ENST00000377255 RUSC2Q8N2Y8 1516 aa16.75■□□□□ 0.27
ZKSCAN3-203ENST00000377255 HSPA5P11021 654 aaKnown RBP16.75■□□□□ 0.27
ZKSCAN3-203ENST00000377255 PKD2Q13563 968 aa16.75■□□□□ 0.27
ZKSCAN3-203ENST00000377255 FHOD3Q2V2M9 1422 aa16.74■□□□□ 0.27
ZKSCAN3-203ENST00000377255 MPHOSPH9Q99550 1183 aa16.74■□□□□ 0.27
ZKSCAN3-203ENST00000377255 DDRGK1Q96HY6 314 aa16.71■□□□□ 0.27
ZKSCAN3-203ENST00000377255 ANKRD30AQ9BXX3 1397 aa16.71■□□□□ 0.27
ZKSCAN3-203ENST00000377255 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
ZKSCAN3-203ENST00000377255 NBR1Q14596 966 aa16.7■□□□□ 0.26
ZKSCAN3-203ENST00000377255 NUDCQ9Y266 331 aa16.7■□□□□ 0.26
ZKSCAN3-203ENST00000377255 SENP3-EIF4A1A0A087X0R7 540 aa16.68■□□□□ 0.26
ZKSCAN3-203ENST00000377255 POGKQ9P215 609 aa16.68■□□□□ 0.26
ZKSCAN3-203ENST00000377255 CC2D1BQ5T0F9 858 aaKnown RBP16.68■□□□□ 0.26
ZKSCAN3-203ENST00000377255 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
ZKSCAN3-203ENST00000377255 NUP155O75694 1391 aa16.66■□□□□ 0.26
ZKSCAN3-203ENST00000377255 CCDC18Q5T9S5 1454 aa16.66■□□□□ 0.26
ZKSCAN3-203ENST00000377255 FOXD1Q16676 465 aa16.66■□□□□ 0.26
ZKSCAN3-203ENST00000377255 EFCAB2Q5VUJ9 269 aa16.66■□□□□ 0.26
ZKSCAN3-203ENST00000377255 ARID4BQ4LE39 1312 aaPredicted RBP16.66■□□□□ 0.26
ZKSCAN3-203ENST00000377255 BECN1Q14457 450 aa16.66■□□□□ 0.26
ZKSCAN3-203ENST00000377255 MAPK8IP3Q9UPT6 1336 aa16.65■□□□□ 0.26
ZKSCAN3-203ENST00000377255 RSPH4AQ5TD94 716 aa16.64■□□□□ 0.25
ZKSCAN3-203ENST00000377255 DHX57Q6P158 1386 aaKnown RBP16.62■□□□□ 0.25
ZKSCAN3-203ENST00000377255 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
ZKSCAN3-203ENST00000377255 NEUROD2Q15784 382 aa16.62■□□□□ 0.25
ZKSCAN3-203ENST00000377255 C14orf37Q86TY3 774 aa16.61■□□□□ 0.25
ZKSCAN3-203ENST00000377255 FTSJ3Q8IY81 847 aaKnown RBP16.61■□□□□ 0.25
ZKSCAN3-203ENST00000377255 L3MBTL2Q969R5 705 aa16.59■□□□□ 0.25
ZKSCAN3-203ENST00000377255 JPH4Q96JJ6 628 aa16.59■□□□□ 0.25
ZKSCAN3-203ENST00000377255 IGF1RP08069 1367 aa16.58■□□□□ 0.25
ZKSCAN3-203ENST00000377255 KTN1Q86UP2 1357 aaKnown RBP16.58■□□□□ 0.25
ZKSCAN3-203ENST00000377255 PNNQ9H307 717 aaKnown RBP16.58■□□□□ 0.25
ZKSCAN3-203ENST00000377255 MS4A1P11836 297 aa16.58■□□□□ 0.24
ZKSCAN3-203ENST00000377255 NCAPD3P42695 1498 aa16.58■□□□□ 0.24
ZKSCAN3-203ENST00000377255 ERICH6BQ5W0A0 696 aa16.57■□□□□ 0.24
ZKSCAN3-203ENST00000377255 RALBP1Q15311 655 aa16.57■□□□□ 0.24
ZKSCAN3-203ENST00000377255 ROCK2O75116 1388 aaKnown RBP16.57■□□□□ 0.24
ZKSCAN3-203ENST00000377255 EIF5BO60841 1220 aaKnown RBP16.56■□□□□ 0.24
ZKSCAN3-203ENST00000377255 TNNT2P45379 298 aaPredicted RBP16.56■□□□□ 0.24
ZKSCAN3-203ENST00000377255 HDGFP51858 240 aaKnown RBP16.55■□□□□ 0.24
ZKSCAN3-203ENST00000377255 CHMP4BQ9H444 224 aaKnown RBP16.55■□□□□ 0.24
ZKSCAN3-203ENST00000377255 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
ZKSCAN3-203ENST00000377255 B4GALNT3Q6L9W6 998 aa16.54■□□□□ 0.24
ZKSCAN3-203ENST00000377255 ZBTB7CA1YPR0 619 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms