RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 P3H3Q8IVL6 736 aa19.95■□□□□ 0.78
TRIM40-206ENST00000376724 CTTNBP2Q8WZ74 1663 aa19.93■□□□□ 0.78
TRIM40-206ENST00000376724 FHAD1B1AJZ9 1412 aa19.91■□□□□ 0.78
TRIM40-206ENST00000376724 HRCP23327 699 aa19.9■□□□□ 0.78
TRIM40-206ENST00000376724 EIF4G3O43432 1585 aaKnown RBP19.89■□□□□ 0.77
TRIM40-206ENST00000376724 ADAMTS12P58397 1594 aa19.88■□□□□ 0.77
TRIM40-206ENST00000376724 SNAPC4Q5SXM2 1469 aa19.84■□□□□ 0.77
TRIM40-206ENST00000376724 FHOD3Q2V2M9 1422 aa19.84■□□□□ 0.77
TRIM40-206ENST00000376724 EFCAB5A4FU69 1503 aa19.81■□□□□ 0.76
TRIM40-206ENST00000376724 KANK4Q5T7N3 995 aaPredicted RBP19.81■□□□□ 0.76
TRIM40-206ENST00000376724 ATP1B4Q9UN42 357 aaPredicted RBP19.79■□□□□ 0.76
TRIM40-206ENST00000376724 FBLN2P98095 1184 aa19.75■□□□□ 0.75
TRIM40-206ENST00000376724 CHMP7Q8WUX9 453 aaPredicted RBP19.74■□□□□ 0.75
TRIM40-206ENST00000376724 MAGI1Q96QZ7 1491 aaPredicted RBP19.73■□□□□ 0.75
TRIM40-206ENST00000376724 PCF11O94913 1555 aaKnown RBP19.73■□□□□ 0.75
TRIM40-206ENST00000376724 IQGAP2Q13576 1575 aa19.73■□□□□ 0.75
TRIM40-206ENST00000376724 GRIN2AQ12879 1464 aa19.72■□□□□ 0.75
TRIM40-206ENST00000376724 SAMD9Q5K651 1589 aa19.72■□□□□ 0.75
TRIM40-206ENST00000376724 FMN1Q68DA7 1419 aa19.69■□□□□ 0.74
TRIM40-206ENST00000376724 SYNJ2O15056 1496 aa19.69■□□□□ 0.74
TRIM40-206ENST00000376724 TIAM1Q13009 1591 aa19.68■□□□□ 0.74
TRIM40-206ENST00000376724 CASKIN1Q8WXD9 1431 aa19.66■□□□□ 0.74
TRIM40-206ENST00000376724 FYCO1Q9BQS8 1478 aa19.65■□□□□ 0.74
TRIM40-206ENST00000376724 HNRNPUL2Q1KMD3 747 aaKnown RBP19.65■□□□□ 0.74
TRIM40-206ENST00000376724 KIAA0586Q9BVV6 1533 aa19.65■□□□□ 0.74
TRIM40-206ENST00000376724 MAP3K1Q13233 1512 aa19.64■□□□□ 0.73
TRIM40-206ENST00000376724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.63■□□□□ 0.73
TRIM40-206ENST00000376724 LRRC9Q6ZRR7 1453 aa19.6■□□□□ 0.73
TRIM40-206ENST00000376724 CEP170Q5SW79 1584 aa19.6■□□□□ 0.73
TRIM40-206ENST00000376724 UGGT2Q9NYU1 1516 aa19.59■□□□□ 0.73
TRIM40-206ENST00000376724 CFAP43Q8NDM7 1665 aa19.59■□□□□ 0.73
TRIM40-206ENST00000376724 CCER1Q8TC90 406 aaPredicted RBP19.56■□□□□ 0.72
TRIM40-206ENST00000376724 NUP160Q12769 1436 aa19.53■□□□□ 0.72
TRIM40-206ENST00000376724 ZEB1P37275 1124 aaPredicted RBP19.53■□□□□ 0.72
TRIM40-206ENST00000376724 DISP1Q96F81 1524 aa19.53■□□□□ 0.72
TRIM40-206ENST00000376724 KIAA0556O60303 1618 aa19.52■□□□□ 0.72
TRIM40-206ENST00000376724 RRBP1Q9P2E9 1410 aaKnown RBP19.51■□□□□ 0.71
TRIM40-206ENST00000376724 LRRIQ1Q96JM4 1722 aa19.5■□□□□ 0.71
TRIM40-206ENST00000376724 JPH4Q96JJ6 628 aa19.49■□□□□ 0.71
TRIM40-206ENST00000376724 CCNB3Q8WWL7 1395 aa19.49■□□□□ 0.71
TRIM40-206ENST00000376724 PHLDB1Q86UU1 1377 aa19.48■□□□□ 0.71
TRIM40-206ENST00000376724 ARID3CA6NKF2 412 aa19.48■□□□□ 0.71
TRIM40-206ENST00000376724 MTUS2Q5JR59 1369 aa19.48■□□□□ 0.71
TRIM40-206ENST00000376724 ITGAEP38570 1179 aa19.46■□□□□ 0.71
TRIM40-206ENST00000376724 HECW1Q76N89 1606 aa19.45■□□□□ 0.7
TRIM40-206ENST00000376724 CHD1O14646 1710 aa19.44■□□□□ 0.7
TRIM40-206ENST00000376724 CCDC18Q5T9S5 1454 aa19.42■□□□□ 0.7
TRIM40-206ENST00000376724 CARMIL2Q6F5E8 1435 aa19.42■□□□□ 0.7
TRIM40-206ENST00000376724 FAM50AQ14320 339 aaKnown RBP19.41■□□□□ 0.7
TRIM40-206ENST00000376724 EPRSP07814 1512 aaKnown RBP19.4■□□□□ 0.7
TRIM40-206ENST00000376724 CDK13Q14004 1512 aaKnown RBP19.39■□□□□ 0.7
TRIM40-206ENST00000376724 MAGI3Q5TCQ9 1506 aa19.36■□□□□ 0.69
TRIM40-206ENST00000376724 EHBP1L1Q8N3D4 1523 aa19.36■□□□□ 0.69
TRIM40-206ENST00000376724 RAPGEF6Q8TEU7 1601 aa19.36■□□□□ 0.69
TRIM40-206ENST00000376724 NCOA2Q15596 1464 aa19.34■□□□□ 0.69
TRIM40-206ENST00000376724 PRG4Q92954 1404 aaPredicted RBP19.33■□□□□ 0.69
TRIM40-206ENST00000376724 NUP153P49790 1475 aaKnown RBP19.33■□□□□ 0.69
TRIM40-206ENST00000376724 PLB1Q6P1J6 1458 aa19.33■□□□□ 0.69
TRIM40-206ENST00000376724 SUPT6HQ7KZ85 1726 aaKnown RBP19.33■□□□□ 0.68
TRIM40-206ENST00000376724 FGD6Q6ZV73 1430 aa19.29■□□□□ 0.68
TRIM40-206ENST00000376724 MYOM3Q5VTT5 1437 aa19.27■□□□□ 0.67
TRIM40-206ENST00000376724 CDK11AQ9UQ88 783 aaPredicted RBP19.25■□□□□ 0.67
TRIM40-206ENST00000376724 ARHGEF11O15085 1522 aa19.24■□□□□ 0.67
TRIM40-206ENST00000376724 PTPRGP23470 1445 aa19.23■□□□□ 0.67
TRIM40-206ENST00000376724 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.22■□□□□ 0.67
TRIM40-206ENST00000376724 SHROOM2Q13796 1616 aa19.21■□□□□ 0.67
TRIM40-206ENST00000376724 ABCA8O94911 1581 aa19.2■□□□□ 0.66
TRIM40-206ENST00000376724 ERCC6L2Q5T890 1561 aa19.18■□□□□ 0.66
TRIM40-206ENST00000376724 RAB3GAP2Q9H2M9 1393 aa19.17■□□□□ 0.66
TRIM40-206ENST00000376724 PTPN23Q9H3S7 1636 aa19.17■□□□□ 0.66
TRIM40-206ENST00000376724 DHX57Q6P158 1386 aaKnown RBP19.16■□□□□ 0.66
TRIM40-206ENST00000376724 CLASP1Q7Z460 1538 aa19.16■□□□□ 0.66
TRIM40-206ENST00000376724 SETD5Q9C0A6 1442 aa19.16■□□□□ 0.66
TRIM40-206ENST00000376724 TROQ12816 1431 aaPredicted RBP19.15■□□□□ 0.66
TRIM40-206ENST00000376724 ATP10BO94823 1461 aa19.14■□□□□ 0.65
TRIM40-206ENST00000376724 PLEKHD1A6NEE1 506 aa19.13■□□□□ 0.65
TRIM40-206ENST00000376724 PTPRKQ15262 1439 aa19.11■□□□□ 0.65
TRIM40-206ENST00000376724 MIA2Q96PC5 1412 aa19.1■□□□□ 0.65
TRIM40-206ENST00000376724 UACAQ9BZF9 1416 aa19.1■□□□□ 0.65
TRIM40-206ENST00000376724 TCOF1Q13428 1488 aaKnown RBP19.09■□□□□ 0.65
TRIM40-206ENST00000376724 KIF14Q15058 1648 aa19.08■□□□□ 0.64
TRIM40-206ENST00000376724 CHIC2Q9UKJ5 165 aa19.07■□□□□ 0.64
TRIM40-206ENST00000376724 ZNF644Q9H582 1327 aaPredicted RBP19.05■□□□□ 0.64
TRIM40-206ENST00000376724 CLSPNQ9HAW4 1339 aa19.04■□□□□ 0.64
TRIM40-206ENST00000376724 CFDP1Q9UEE9 299 aaPredicted RBP19.04■□□□□ 0.64
TRIM40-206ENST00000376724 ADCY10Q96PN6 1610 aa19.04■□□□□ 0.64
TRIM40-206ENST00000376724 ZNF777Q9ULD5 760 aaPredicted RBP19.02■□□□□ 0.64
TRIM40-206ENST00000376724 RRP7BPQ9NSQ0 103 aa19.01■□□□□ 0.63
TRIM40-206ENST00000376724 HFM1A2PYH4 1435 aa19.01■□□□□ 0.63
TRIM40-206ENST00000376724 ABCC2Q92887 1545 aa19.01■□□□□ 0.63
TRIM40-206ENST00000376724 GPATCH8Q9UKJ3 1502 aaKnown RBP19.01■□□□□ 0.63
TRIM40-206ENST00000376724 OSCARQ8IYS5 282 aa19■□□□□ 0.63
TRIM40-206ENST00000376724 ITSN2Q9NZM3 1697 aa18.99■□□□□ 0.63
TRIM40-206ENST00000376724 NAIPQ13075 1403 aa18.99■□□□□ 0.63
TRIM40-206ENST00000376724 DAPK1P53355 1430 aa18.96■□□□□ 0.63
TRIM40-206ENST00000376724 CAMSAP2Q08AD1 1489 aa18.96■□□□□ 0.63
TRIM40-206ENST00000376724 ABCC10Q5T3U5 1492 aa18.96■□□□□ 0.63
TRIM40-206ENST00000376724 MAPKBP1O60336 1514 aa18.94■□□□□ 0.62
TRIM40-206ENST00000376724 ABCC5O15440 1437 aa18.93■□□□□ 0.62
TRIM40-206ENST00000376724 CDC42BPAQ5VT25 1732 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms