RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 GRIN2BQ13224 1484 aa19.5■□□□□ 0.71
CLCN6-206ENST00000376496 EIF4G3O43432 1585 aaKnown RBP19.49■□□□□ 0.71
CLCN6-206ENST00000376496 CTTNBP2Q8WZ74 1663 aa19.48■□□□□ 0.71
CLCN6-206ENST00000376496 ADAMTS12P58397 1594 aa19.46■□□□□ 0.71
CLCN6-206ENST00000376496 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
CLCN6-206ENST00000376496 FHOD3Q2V2M9 1422 aa19.45■□□□□ 0.7
CLCN6-206ENST00000376496 SNAPC4Q5SXM2 1469 aa19.45■□□□□ 0.7
CLCN6-206ENST00000376496 KANK4Q5T7N3 995 aaPredicted RBP19.44■□□□□ 0.7
CLCN6-206ENST00000376496 ATP1B4Q9UN42 357 aaPredicted RBP19.42■□□□□ 0.7
CLCN6-206ENST00000376496 HRCP23327 699 aa19.42■□□□□ 0.7
CLCN6-206ENST00000376496 FBLN2P98095 1184 aa19.41■□□□□ 0.7
CLCN6-206ENST00000376496 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.69
CLCN6-206ENST00000376496 PCF11O94913 1555 aaKnown RBP19.32■□□□□ 0.68
CLCN6-206ENST00000376496 EFCAB5A4FU69 1503 aa19.32■□□□□ 0.68
CLCN6-206ENST00000376496 GRIN2AQ12879 1464 aa19.3■□□□□ 0.68
CLCN6-206ENST00000376496 IQGAP2Q13576 1575 aa19.28■□□□□ 0.68
CLCN6-206ENST00000376496 SAMD9Q5K651 1589 aa19.27■□□□□ 0.68
CLCN6-206ENST00000376496 MAGI1Q96QZ7 1491 aaPredicted RBP19.27■□□□□ 0.68
CLCN6-206ENST00000376496 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.68
CLCN6-206ENST00000376496 SYNJ2O15056 1496 aa19.25■□□□□ 0.67
CLCN6-206ENST00000376496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.24■□□□□ 0.67
CLCN6-206ENST00000376496 TIAM1Q13009 1591 aa19.23■□□□□ 0.67
CLCN6-206ENST00000376496 CEP170Q5SW79 1584 aa19.21■□□□□ 0.67
CLCN6-206ENST00000376496 ARID3CA6NKF2 412 aa19.2■□□□□ 0.66
CLCN6-206ENST00000376496 FMN1Q68DA7 1419 aa19.2■□□□□ 0.66
CLCN6-206ENST00000376496 KIAA0586Q9BVV6 1533 aa19.2■□□□□ 0.66
CLCN6-206ENST00000376496 CASKIN1Q8WXD9 1431 aa19.2■□□□□ 0.66
CLCN6-206ENST00000376496 FYCO1Q9BQS8 1478 aa19.18■□□□□ 0.66
CLCN6-206ENST00000376496 LRRC9Q6ZRR7 1453 aa19.16■□□□□ 0.66
CLCN6-206ENST00000376496 UGGT2Q9NYU1 1516 aa19.14■□□□□ 0.65
CLCN6-206ENST00000376496 DISP1Q96F81 1524 aa19.13■□□□□ 0.65
CLCN6-206ENST00000376496 CFAP43Q8NDM7 1665 aa19.13■□□□□ 0.65
CLCN6-206ENST00000376496 LRRIQ1Q96JM4 1722 aa19.13■□□□□ 0.65
CLCN6-206ENST00000376496 MAP3K1Q13233 1512 aa19.11■□□□□ 0.65
CLCN6-206ENST00000376496 ITGAEP38570 1179 aa19.11■□□□□ 0.65
CLCN6-206ENST00000376496 NUP160Q12769 1436 aa19.11■□□□□ 0.65
CLCN6-206ENST00000376496 CCER1Q8TC90 406 aaPredicted RBP19.11■□□□□ 0.65
CLCN6-206ENST00000376496 JPH4Q96JJ6 628 aa19.09■□□□□ 0.65
CLCN6-206ENST00000376496 KIAA0556O60303 1618 aa19.09■□□□□ 0.65
CLCN6-206ENST00000376496 PHLDB1Q86UU1 1377 aa19.09■□□□□ 0.65
CLCN6-206ENST00000376496 CHD1O14646 1710 aa19.07■□□□□ 0.64
CLCN6-206ENST00000376496 RRBP1Q9P2E9 1410 aaKnown RBP19.04■□□□□ 0.64
CLCN6-206ENST00000376496 MTUS2Q5JR59 1369 aa19.04■□□□□ 0.64
CLCN6-206ENST00000376496 CCNB3Q8WWL7 1395 aa19.04■□□□□ 0.64
CLCN6-206ENST00000376496 CDK13Q14004 1512 aaKnown RBP19.03■□□□□ 0.64
CLCN6-206ENST00000376496 FAM50AQ14320 339 aaKnown RBP19.01■□□□□ 0.63
CLCN6-206ENST00000376496 MAGI3Q5TCQ9 1506 aa19■□□□□ 0.63
CLCN6-206ENST00000376496 HECW1Q76N89 1606 aa18.99■□□□□ 0.63
CLCN6-206ENST00000376496 EPRSP07814 1512 aaKnown RBP18.98■□□□□ 0.63
CLCN6-206ENST00000376496 PLB1Q6P1J6 1458 aa18.97■□□□□ 0.63
CLCN6-206ENST00000376496 CARMIL2Q6F5E8 1435 aa18.95■□□□□ 0.62
CLCN6-206ENST00000376496 PRG4Q92954 1404 aaPredicted RBP18.95■□□□□ 0.62
CLCN6-206ENST00000376496 ZEB1P37275 1124 aaPredicted RBP18.94■□□□□ 0.62
CLCN6-206ENST00000376496 NUP153P49790 1475 aaKnown RBP18.93■□□□□ 0.62
CLCN6-206ENST00000376496 CCDC18Q5T9S5 1454 aa18.92■□□□□ 0.62
CLCN6-206ENST00000376496 RAPGEF6Q8TEU7 1601 aa18.92■□□□□ 0.62
CLCN6-206ENST00000376496 NCOA2Q15596 1464 aa18.92■□□□□ 0.62
CLCN6-206ENST00000376496 EHBP1L1Q8N3D4 1523 aa18.89■□□□□ 0.61
CLCN6-206ENST00000376496 ERCC6L2Q5T890 1561 aa18.88■□□□□ 0.61
CLCN6-206ENST00000376496 SUPT6HQ7KZ85 1726 aaKnown RBP18.86■□□□□ 0.61
CLCN6-206ENST00000376496 FGD6Q6ZV73 1430 aa18.86■□□□□ 0.61
CLCN6-206ENST00000376496 PTPRGP23470 1445 aa18.83■□□□□ 0.6
CLCN6-206ENST00000376496 MYOM3Q5VTT5 1437 aa18.82■□□□□ 0.6
CLCN6-206ENST00000376496 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
CLCN6-206ENST00000376496 SHROOM2Q13796 1616 aa18.79■□□□□ 0.6
CLCN6-206ENST00000376496 ABCA8O94911 1581 aa18.78■□□□□ 0.6
CLCN6-206ENST00000376496 CLASP1Q7Z460 1538 aa18.76■□□□□ 0.59
CLCN6-206ENST00000376496 CDK11AQ9UQ88 783 aaPredicted RBP18.76■□□□□ 0.59
CLCN6-206ENST00000376496 RAB3GAP2Q9H2M9 1393 aa18.76■□□□□ 0.59
CLCN6-206ENST00000376496 PTPRKQ15262 1439 aa18.75■□□□□ 0.59
CLCN6-206ENST00000376496 ATP10BO94823 1461 aa18.75■□□□□ 0.59
CLCN6-206ENST00000376496 PTPN23Q9H3S7 1636 aa18.74■□□□□ 0.59
CLCN6-206ENST00000376496 DHX57Q6P158 1386 aaKnown RBP18.73■□□□□ 0.59
CLCN6-206ENST00000376496 ZNF644Q9H582 1327 aaPredicted RBP18.72■□□□□ 0.59
CLCN6-206ENST00000376496 CHIC2Q9UKJ5 165 aa18.72■□□□□ 0.59
CLCN6-206ENST00000376496 KIF14Q15058 1648 aa18.71■□□□□ 0.59
CLCN6-206ENST00000376496 TROQ12816 1431 aaPredicted RBP18.71■□□□□ 0.59
CLCN6-206ENST00000376496 SETD5Q9C0A6 1442 aa18.71■□□□□ 0.58
CLCN6-206ENST00000376496 PLEKHD1A6NEE1 506 aa18.69■□□□□ 0.58
CLCN6-206ENST00000376496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.69■□□□□ 0.58
CLCN6-206ENST00000376496 UACAQ9BZF9 1416 aa18.68■□□□□ 0.58
CLCN6-206ENST00000376496 ZNF777Q9ULD5 760 aaPredicted RBP18.67■□□□□ 0.58
CLCN6-206ENST00000376496 RRP7BPQ9NSQ0 103 aa18.65■□□□□ 0.58
CLCN6-206ENST00000376496 TCOF1Q13428 1488 aaKnown RBP18.63■□□□□ 0.57
CLCN6-206ENST00000376496 CFDP1Q9UEE9 299 aaPredicted RBP18.62■□□□□ 0.57
CLCN6-206ENST00000376496 MIA2Q96PC5 1412 aa18.62■□□□□ 0.57
CLCN6-206ENST00000376496 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
CLCN6-206ENST00000376496 GPATCH8Q9UKJ3 1502 aaKnown RBP18.6■□□□□ 0.57
CLCN6-206ENST00000376496 ABCC2Q92887 1545 aa18.59■□□□□ 0.57
CLCN6-206ENST00000376496 KCNH8Q96L42 1107 aa18.58■□□□□ 0.57
CLCN6-206ENST00000376496 ADCY10Q96PN6 1610 aa18.58■□□□□ 0.56
CLCN6-206ENST00000376496 NAIPQ13075 1403 aa18.56■□□□□ 0.56
CLCN6-206ENST00000376496 HFM1A2PYH4 1435 aa18.55■□□□□ 0.56
CLCN6-206ENST00000376496 ABCC10Q5T3U5 1492 aa18.55■□□□□ 0.56
CLCN6-206ENST00000376496 CAMSAP2Q08AD1 1489 aa18.54■□□□□ 0.56
CLCN6-206ENST00000376496 ABCC5O15440 1437 aa18.53■□□□□ 0.56
CLCN6-206ENST00000376496 MAPKBP1O60336 1514 aa18.53■□□□□ 0.56
CLCN6-206ENST00000376496 DAPK1P53355 1430 aa18.53■□□□□ 0.56
CLCN6-206ENST00000376496 CDC42BPAQ5VT25 1732 aa18.53■□□□□ 0.56
CLCN6-206ENST00000376496 ITSN2Q9NZM3 1697 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms