RNA–Protein interactions for RNA: ENST00000376108.7

CLCN5-204, Transcript of chloride voltage-gated channel 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN5, Length 2,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-204ENST00000376108 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
CLCN5-204ENST00000376108 ZNF326Q5BKZ1 582 aaKnown RBP12.06□□□□□ -0.48
CLCN5-204ENST00000376108 PRDM4Q9UKN5 801 aa12.06□□□□□ -0.48
CLCN5-204ENST00000376108 NAP1L5Q96NT1 182 aaPredicted RBP12.05□□□□□ -0.48
CLCN5-204ENST00000376108 ANP32AP39687 249 aaKnown RBP12.04□□□□□ -0.48
CLCN5-204ENST00000376108 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
CLCN5-204ENST00000376108 BRD2P25440 801 aaKnown RBP12.04□□□□□ -0.48
CLCN5-204ENST00000376108 DHX37Q8IY37 1157 aaKnown RBP12.04□□□□□ -0.48
CLCN5-204ENST00000376108 HSP90AA1P07900 732 aaKnown RBP12.03□□□□□ -0.48
CLCN5-204ENST00000376108 CHMP4BQ9H444 224 aaKnown RBP12.03□□□□□ -0.48
CLCN5-204ENST00000376108 CALD1Q05682 793 aaKnown RBP12.01□□□□□ -0.49
CLCN5-204ENST00000376108 GSE1Q14687 1217 aa12.01□□□□□ -0.49
CLCN5-204ENST00000376108 RB1CC1Q8TDY2 1594 aa12.01□□□□□ -0.49
CLCN5-204ENST00000376108 CHMP4AQ9BY43 222 aa12.01□□□□□ -0.49
CLCN5-204ENST00000376108 GTF2E1P29083 439 aaPredicted RBP11.99□□□□□ -0.49
CLCN5-204ENST00000376108 RGS3P49796 1198 aa11.98□□□□□ -0.49
CLCN5-204ENST00000376108 IPO4Q8TEX9 1081 aaKnown RBP11.98□□□□□ -0.49
CLCN5-204ENST00000376108 EHMT2Q96KQ7 1210 aa11.95□□□□□ -0.5
CLCN5-204ENST00000376108 PPP4R2Q9NY27 417 aa11.94□□□□□ -0.5
CLCN5-204ENST00000376108 CANXP27824 592 aaKnown RBP11.93□□□□□ -0.5
CLCN5-204ENST00000376108 STAC3Q96MF2 364 aa11.93□□□□□ -0.5
CLCN5-204ENST00000376108 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
CLCN5-204ENST00000376108 CENPJQ9HC77 1338 aaPredicted RBP11.93□□□□□ -0.5
CLCN5-204ENST00000376108 PPM1GO15355 546 aaPredicted RBP11.93□□□□□ -0.5
CLCN5-204ENST00000376108 HOMEZQ8IX15 550 aa11.92□□□□□ -0.5
CLCN5-204ENST00000376108 IRX6P78412 446 aaPredicted RBP11.91□□□□□ -0.5
CLCN5-204ENST00000376108 FRAT1Q92837 279 aaPredicted RBP11.9□□□□□ -0.5
CLCN5-204ENST00000376108 TRIM52Q96A61 297 aa11.9□□□□□ -0.5
CLCN5-204ENST00000376108 PLPPR3Q6T4P5 718 aa11.9□□□□□ -0.5
CLCN5-204ENST00000376108 RRAGDQ9NQL2 400 aaPredicted RBP11.9□□□□□ -0.5
CLCN5-204ENST00000376108 SAMD1Q6SPF0 538 aaPredicted RBP11.88□□□□□ -0.51
CLCN5-204ENST00000376108 TULP1O00294 542 aaPredicted RBP11.87□□□□□ -0.51
CLCN5-204ENST00000376108 CNGB1Q14028 1251 aaPredicted RBP11.87□□□□□ -0.51
CLCN5-204ENST00000376108 DCAF11Q8TEB1 546 aa11.86□□□□□ -0.51
CLCN5-204ENST00000376108 ZFP91Q96JP5 570 aaPredicted RBP11.85□□□□□ -0.51
CLCN5-204ENST00000376108 PDCL3Q9H2J4 239 aa11.85□□□□□ -0.51
CLCN5-204ENST00000376108 HAP1P54257 671 aaPredicted RBP11.83□□□□□ -0.51
CLCN5-204ENST00000376108 PNNQ9H307 717 aaKnown RBP11.83□□□□□ -0.51
CLCN5-204ENST00000376108 NACADO15069 1562 aa11.83□□□□□ -0.52
CLCN5-204ENST00000376108 B4GALNT3Q6L9W6 998 aa11.81□□□□□ -0.52
CLCN5-204ENST00000376108 FTSJ3Q8IY81 847 aaKnown RBP11.81□□□□□ -0.52
CLCN5-204ENST00000376108 FOXD1Q16676 465 aa11.8□□□□□ -0.52
CLCN5-204ENST00000376108 TEX2Q8IWB9 1127 aa11.8□□□□□ -0.52
CLCN5-204ENST00000376108 UNC13AQ9UPW8 1703 aa11.79□□□□□ -0.52
CLCN5-204ENST00000376108 NPM2Q86SE8 214 aaKnown RBP11.78□□□□□ -0.52
CLCN5-204ENST00000376108 WRNQ14191 1432 aaPredicted RBP eCLIP11.77□□□□□ -0.53
CLCN5-204ENST00000376108 CHRM1P11229 460 aaPredicted RBP11.77□□□□□ -0.53
CLCN5-204ENST00000376108 SECISBP2LQ93073 1101 aaKnown RBP11.77□□□□□ -0.53
CLCN5-204ENST00000376108 NCLP19338 710 aaKnown RBP11.76□□□□□ -0.53
CLCN5-204ENST00000376108 CLCN1P35523 988 aa11.76□□□□□ -0.53
CLCN5-204ENST00000376108 NFKBIBQ15653 356 aa11.76□□□□□ -0.53
CLCN5-204ENST00000376108 CCER2I3L3R5 266 aa11.75□□□□□ -0.53
CLCN5-204ENST00000376108 EEA1Q15075 1411 aa11.74□□□□□ -0.53
CLCN5-204ENST00000376108 PLCD3Q8N3E9 789 aa11.73□□□□□ -0.53
CLCN5-204ENST00000376108 ZNF830Q96NB3 372 aaPredicted RBP11.73□□□□□ -0.53
CLCN5-204ENST00000376108 BCCIPQ9P287 314 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLCN5-204ENST00000376108 SMAP1Q8IYB5 467 aaPredicted RBP11.71□□□□□ -0.53
CLCN5-204ENST00000376108 DDRGK1Q96HY6 314 aa11.71□□□□□ -0.53
CLCN5-204ENST00000376108 TMEM51Q9NW97 253 aa11.71□□□□□ -0.53
CLCN5-204ENST00000376108 ZHX1Q9UKY1 873 aaPredicted RBP11.7□□□□□ -0.54
CLCN5-204ENST00000376108 TPM2P07951 284 aa11.7□□□□□ -0.54
CLCN5-204ENST00000376108 HNRNPUL2Q1KMD3 747 aaKnown RBP11.69□□□□□ -0.54
CLCN5-204ENST00000376108 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
CLCN5-204ENST00000376108 ARID4BQ4LE39 1312 aaPredicted RBP11.68□□□□□ -0.54
CLCN5-204ENST00000376108 ZCCHC6Q5VYS8 1495 aaKnown RBP11.68□□□□□ -0.54
CLCN5-204ENST00000376108 VGLL3A8MV65 326 aa11.65□□□□□ -0.54
CLCN5-204ENST00000376108 C14orf37Q86TY3 774 aa11.65□□□□□ -0.54
CLCN5-204ENST00000376108 PABPN1Q86U42 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLCN5-204ENST00000376108 RNF216Q9NWF9 866 aaPredicted RBP11.65□□□□□ -0.54
CLCN5-204ENST00000376108 BICRAQ9NZM4 1560 aa11.64□□□□□ -0.55
CLCN5-204ENST00000376108 DDX10Q13206 875 aaKnown RBP11.64□□□□□ -0.55
CLCN5-204ENST00000376108 UTP14CQ5TAP6 766 aaKnown RBP11.63□□□□□ -0.55
CLCN5-204ENST00000376108 BAZ1BQ9UIG0 1483 aaKnown RBP11.63□□□□□ -0.55
CLCN5-204ENST00000376108 HNRNPUQ00839 825 aaKnown RBP eCLIP11.62□□□□□ -0.55
CLCN5-204ENST00000376108 L1TD1Q5T7N2 865 aaKnown RBP11.62□□□□□ -0.55
CLCN5-204ENST00000376108 ANP32CO43423 234 aa11.61□□□□□ -0.55
CLCN5-204ENST00000376108 PPP4R3BQ5MIZ7 849 aa11.61□□□□□ -0.55
CLCN5-204ENST00000376108 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLCN5-204ENST00000376108 MAP7D2Q96T17 732 aa11.6□□□□□ -0.55
CLCN5-204ENST00000376108 NCAPD3P42695 1498 aa11.59□□□□□ -0.55
CLCN5-204ENST00000376108 CNPY4Q8N129 248 aa11.59□□□□□ -0.55
CLCN5-204ENST00000376108 HSP90B1P14625 803 aaKnown RBP11.59□□□□□ -0.55
CLCN5-204ENST00000376108 DMTNQ08495 405 aa11.59□□□□□ -0.55
CLCN5-204ENST00000376108 RGS22Q8NE09 1264 aa11.58□□□□□ -0.56
CLCN5-204ENST00000376108 DHX57Q6P158 1386 aaKnown RBP11.58□□□□□ -0.56
CLCN5-204ENST00000376108 VGFO15240 615 aaPredicted RBP11.58□□□□□ -0.56
CLCN5-204ENST00000376108 PPP1R15AO75807 674 aaPredicted RBP11.58□□□□□ -0.56
CLCN5-204ENST00000376108 ANP32BQ92688 251 aaKnown RBP11.57□□□□□ -0.56
CLCN5-204ENST00000376108 FRAT2O75474 233 aaPredicted RBP11.56□□□□□ -0.56
CLCN5-204ENST00000376108 KCNG1Q9UIX4 513 aa11.56□□□□□ -0.56
CLCN5-204ENST00000376108 DNAJC5Q9H3Z4 198 aa11.55□□□□□ -0.56
CLCN5-204ENST00000376108 IRX3P78415 501 aaPredicted RBP11.54□□□□□ -0.56
CLCN5-204ENST00000376108 PRDM10Q9NQV6 1147 aa11.53□□□□□ -0.56
CLCN5-204ENST00000376108 PDE4AP27815 886 aa11.53□□□□□ -0.56
CLCN5-204ENST00000376108 TNNT2P45379 298 aaPredicted RBP11.53□□□□□ -0.56
CLCN5-204ENST00000376108 SIN3AQ96ST3 1273 aa11.52□□□□□ -0.57
CLCN5-204ENST00000376108 CC2D2AQ9P2K1 1620 aa11.51□□□□□ -0.57
CLCN5-204ENST00000376108 CDK11BP21127 795 aaKnown RBP11.51□□□□□ -0.57
CLCN5-204ENST00000376108 WWC1Q8IX03 1113 aa11.51□□□□□ -0.57
CLCN5-204ENST00000376108 BACH2Q9BYV9 841 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms