RNA–Protein interactions for RNA: ENST00000375430.8

GRTP1-202, Transcript of growth hormone regulated TBC protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GRTP1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRTP1-202ENST00000375430 APLP2Q06481 763 aa32.44■■■□□ 2.78
GRTP1-202ENST00000375430 FHAD1B1AJZ9 1412 aa32.39■■■□□ 2.77
GRTP1-202ENST00000375430 TTBK1Q5TCY1 1321 aaPredicted RBP32.37■■■□□ 2.77
GRTP1-202ENST00000375430 ZEB1P37275 1124 aaPredicted RBP32.36■■■□□ 2.77
GRTP1-202ENST00000375430 CTTNBP2Q8WZ74 1663 aa32.33■■■□□ 2.77
GRTP1-202ENST00000375430 ADAMTS12P58397 1594 aa32.33■■■□□ 2.77
GRTP1-202ENST00000375430 SNAPC4Q5SXM2 1469 aa32.32■■■□□ 2.76
GRTP1-202ENST00000375430 MAGI1Q96QZ7 1491 aaPredicted RBP32.29■■■□□ 2.76
GRTP1-202ENST00000375430 EFCAB5A4FU69 1503 aa32.22■■■□□ 2.75
GRTP1-202ENST00000375430 MAP3K1Q13233 1512 aa32.17■■■□□ 2.74
GRTP1-202ENST00000375430 CHMP7Q8WUX9 453 aaPredicted RBP32.16■■■□□ 2.74
GRTP1-202ENST00000375430 SYNJ2O15056 1496 aa32.16■■■□□ 2.74
GRTP1-202ENST00000375430 GRIN2AQ12879 1464 aa32.11■■■□□ 2.73
GRTP1-202ENST00000375430 FBLN2P98095 1184 aa32.11■■■□□ 2.73
GRTP1-202ENST00000375430 KANK4Q5T7N3 995 aaPredicted RBP32.07■■■□□ 2.73
GRTP1-202ENST00000375430 TIAM1Q13009 1591 aa32.04■■■□□ 2.72
GRTP1-202ENST00000375430 SAMD9Q5K651 1589 aa32.02■■■□□ 2.72
GRTP1-202ENST00000375430 FHOD3Q2V2M9 1422 aa31.99■■■□□ 2.71
GRTP1-202ENST00000375430 PCF11O94913 1555 aaKnown RBP31.98■■■□□ 2.71
GRTP1-202ENST00000375430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.98■■■□□ 2.71
GRTP1-202ENST00000375430 FYCO1Q9BQS8 1478 aa31.96■■■□□ 2.71
GRTP1-202ENST00000375430 CFAP43Q8NDM7 1665 aa31.95■■■□□ 2.71
GRTP1-202ENST00000375430 CCER1Q8TC90 406 aaPredicted RBP31.94■■■□□ 2.7
GRTP1-202ENST00000375430 CASKIN1Q8WXD9 1431 aa31.94■■■□□ 2.7
GRTP1-202ENST00000375430 P3H3Q8IVL6 736 aa31.93■■■□□ 2.7
GRTP1-202ENST00000375430 KIAA0586Q9BVV6 1533 aa31.93■■■□□ 2.7
GRTP1-202ENST00000375430 IQGAP2Q13576 1575 aa31.93■■■□□ 2.7
GRTP1-202ENST00000375430 FMN1Q68DA7 1419 aa31.93■■■□□ 2.7
GRTP1-202ENST00000375430 RRBP1Q9P2E9 1410 aaKnown RBP31.92■■■□□ 2.7
GRTP1-202ENST00000375430 NUP160Q12769 1436 aa31.89■■■□□ 2.69
GRTP1-202ENST00000375430 LRRC9Q6ZRR7 1453 aa31.88■■■□□ 2.69
GRTP1-202ENST00000375430 CEP170Q5SW79 1584 aa31.87■■■□□ 2.69
GRTP1-202ENST00000375430 CHD1O14646 1710 aa31.83■■■□□ 2.69
GRTP1-202ENST00000375430 HNRNPUL2Q1KMD3 747 aaKnown RBP31.83■■■□□ 2.69
GRTP1-202ENST00000375430 UGGT2Q9NYU1 1516 aa31.77■■■□□ 2.68
GRTP1-202ENST00000375430 CCNB3Q8WWL7 1395 aa31.74■■■□□ 2.67
GRTP1-202ENST00000375430 JPH4Q96JJ6 628 aa31.7■■■□□ 2.66
GRTP1-202ENST00000375430 ATP1B4Q9UN42 357 aaPredicted RBP31.66■■■□□ 2.66
GRTP1-202ENST00000375430 LRRIQ1Q96JM4 1722 aa31.64■■■□□ 2.66
GRTP1-202ENST00000375430 DISP1Q96F81 1524 aa31.61■■■□□ 2.65
GRTP1-202ENST00000375430 PHLDB1Q86UU1 1377 aa31.6■■■□□ 2.65
GRTP1-202ENST00000375430 CARMIL2Q6F5E8 1435 aa31.59■■■□□ 2.65
GRTP1-202ENST00000375430 KIAA0556O60303 1618 aa31.59■■■□□ 2.65
GRTP1-202ENST00000375430 CCDC18Q5T9S5 1454 aa31.53■■■□□ 2.64
GRTP1-202ENST00000375430 HECW1Q76N89 1606 aa31.52■■■□□ 2.64
GRTP1-202ENST00000375430 PRG4Q92954 1404 aaPredicted RBP31.49■■■□□ 2.63
GRTP1-202ENST00000375430 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.48■■■□□ 2.63
GRTP1-202ENST00000375430 CLASP1Q7Z460 1538 aa31.48■■■□□ 2.63
GRTP1-202ENST00000375430 MTUS2Q5JR59 1369 aa31.48■■■□□ 2.63
GRTP1-202ENST00000375430 EHBP1L1Q8N3D4 1523 aa31.45■■■□□ 2.63
GRTP1-202ENST00000375430 SHROOM2Q13796 1616 aa31.45■■■□□ 2.63
GRTP1-202ENST00000375430 OSCARQ8IYS5 282 aa31.43■■■□□ 2.62
GRTP1-202ENST00000375430 SUPT6HQ7KZ85 1726 aaKnown RBP31.41■■■□□ 2.62
GRTP1-202ENST00000375430 CLSPNQ9HAW4 1339 aa31.41■■■□□ 2.62
GRTP1-202ENST00000375430 EPRSP07814 1512 aaKnown RBP31.4■■■□□ 2.62
GRTP1-202ENST00000375430 NCOA2Q15596 1464 aa31.35■■■□□ 2.61
GRTP1-202ENST00000375430 FGD6Q6ZV73 1430 aa31.35■■■□□ 2.61
GRTP1-202ENST00000375430 ARHGEF11O15085 1522 aa31.34■■■□□ 2.61
GRTP1-202ENST00000375430 DHX57Q6P158 1386 aaKnown RBP31.34■■■□□ 2.61
GRTP1-202ENST00000375430 MAGI3Q5TCQ9 1506 aa31.33■■■□□ 2.61
GRTP1-202ENST00000375430 FAM50AQ14320 339 aaKnown RBP31.31■■■□□ 2.6
GRTP1-202ENST00000375430 ITGAEP38570 1179 aa31.3■■■□□ 2.6
GRTP1-202ENST00000375430 MYOM3Q5VTT5 1437 aa31.29■■■□□ 2.6
GRTP1-202ENST00000375430 RAPGEF6Q8TEU7 1601 aa31.29■■■□□ 2.6
GRTP1-202ENST00000375430 PTPRGP23470 1445 aa31.29■■■□□ 2.6
GRTP1-202ENST00000375430 CDK13Q14004 1512 aaKnown RBP31.26■■■□□ 2.59
GRTP1-202ENST00000375430 SETD5Q9C0A6 1442 aa31.25■■■□□ 2.59
GRTP1-202ENST00000375430 ERCC6L2Q5T890 1561 aa31.23■■■□□ 2.59
GRTP1-202ENST00000375430 RAB3GAP2Q9H2M9 1393 aa31.23■■■□□ 2.59
GRTP1-202ENST00000375430 NUP153P49790 1475 aaKnown RBP31.22■■■□□ 2.59
GRTP1-202ENST00000375430 PLB1Q6P1J6 1458 aa31.22■■■□□ 2.59
GRTP1-202ENST00000375430 ABCA8O94911 1581 aa31.15■■■□□ 2.58
GRTP1-202ENST00000375430 PTPN23Q9H3S7 1636 aa31.15■■■□□ 2.58
GRTP1-202ENST00000375430 ARID3CA6NKF2 412 aa31.14■■■□□ 2.58
GRTP1-202ENST00000375430 TCOF1Q13428 1488 aaKnown RBP31.12■■■□□ 2.57
GRTP1-202ENST00000375430 MIA2Q96PC5 1412 aa31.09■■■□□ 2.57
GRTP1-202ENST00000375430 UACAQ9BZF9 1416 aa31.09■■■□□ 2.57
GRTP1-202ENST00000375430 CDK11AQ9UQ88 783 aaPredicted RBP31.07■■■□□ 2.56
GRTP1-202ENST00000375430 PTPRKQ15262 1439 aa31.02■■■□□ 2.56
GRTP1-202ENST00000375430 HFM1A2PYH4 1435 aa31■■■□□ 2.55
GRTP1-202ENST00000375430 MAPKBP1O60336 1514 aa30.98■■■□□ 2.55
GRTP1-202ENST00000375430 TROQ12816 1431 aaPredicted RBP30.98■■■□□ 2.55
GRTP1-202ENST00000375430 ABCC2Q92887 1545 aa30.97■■■□□ 2.55
GRTP1-202ENST00000375430 ATP10BO94823 1461 aa30.97■■■□□ 2.55
GRTP1-202ENST00000375430 ADCY10Q96PN6 1610 aa30.95■■■□□ 2.54
GRTP1-202ENST00000375430 ZNF316A6NFI3 1004 aaPredicted RBP30.92■■■□□ 2.54
GRTP1-202ENST00000375430 UHRF1BP1LA0JNW5 1464 aa30.92■■■□□ 2.54
GRTP1-202ENST00000375430 PLEKHD1A6NEE1 506 aa30.91■■■□□ 2.54
GRTP1-202ENST00000375430 NAIPQ13075 1403 aa30.9■■■□□ 2.54
GRTP1-202ENST00000375430 AKNAQ7Z591 1439 aa30.88■■■□□ 2.53
GRTP1-202ENST00000375430 ITSN2Q9NZM3 1697 aa30.84■■■□□ 2.53
GRTP1-202ENST00000375430 GCC2Q8IWJ2 1684 aa30.83■■■□□ 2.53
GRTP1-202ENST00000375430 KIF14Q15058 1648 aa30.8■■■□□ 2.52
GRTP1-202ENST00000375430 DNMT1P26358 1616 aaKnown RBP30.78■■■□□ 2.52
GRTP1-202ENST00000375430 KDM5BQ9UGL1 1544 aa30.78■■■□□ 2.52
GRTP1-202ENST00000375430 DIEXFQ68CQ4 756 aaKnown RBP30.76■■■□□ 2.51
GRTP1-202ENST00000375430 GPATCH8Q9UKJ3 1502 aaKnown RBP30.76■■■□□ 2.51
GRTP1-202ENST00000375430 DAPK1P53355 1430 aa30.74■■■□□ 2.51
GRTP1-202ENST00000375430 ZCCHC11Q5TAX3 1644 aaKnown RBP30.74■■■□□ 2.51
GRTP1-202ENST00000375430 ROCK1Q13464 1354 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms