RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 ADAMTS12P58397 1594 aa17.27■□□□□ 0.35
HLA-DOA-202ENST00000374813 MAPKBP1O60336 1514 aa17.26■□□□□ 0.35
HLA-DOA-202ENST00000374813 WRNQ14191 1432 aaPredicted RBP eCLIP17.25■□□□□ 0.35
HLA-DOA-202ENST00000374813 DIP2BQ9P265 1576 aa17.23■□□□□ 0.35
HLA-DOA-202ENST00000374813 TSPOAP1O95153 1857 aa17.18■□□□□ 0.34
HLA-DOA-202ENST00000374813 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
HLA-DOA-202ENST00000374813 ADCY10Q96PN6 1610 aa17.12■□□□□ 0.33
HLA-DOA-202ENST00000374813 ADGRL1O94910 1474 aa17.09■□□□□ 0.33
HLA-DOA-202ENST00000374813 HECW2Q9P2P5 1572 aa17.05■□□□□ 0.32
HLA-DOA-202ENST00000374813 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
HLA-DOA-202ENST00000374813 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
HLA-DOA-202ENST00000374813 FBXO41Q8TF61 875 aa17.03■□□□□ 0.32
HLA-DOA-202ENST00000374813 BIVM-ERCC5R4GMW8 1640 aa17.02■□□□□ 0.31
HLA-DOA-202ENST00000374813 PTPRGP23470 1445 aa16.98■□□□□ 0.31
HLA-DOA-202ENST00000374813 KIAA0586Q9BVV6 1533 aa16.98■□□□□ 0.31
HLA-DOA-202ENST00000374813 PLB1Q6P1J6 1458 aa16.98■□□□□ 0.31
HLA-DOA-202ENST00000374813 GLI2P10070 1586 aa16.96■□□□□ 0.31
HLA-DOA-202ENST00000374813 ASXL2Q76L83 1435 aa16.94■□□□□ 0.3
HLA-DOA-202ENST00000374813 ABCC2Q92887 1545 aa16.93■□□□□ 0.3
HLA-DOA-202ENST00000374813 PPRC1Q5VV67 1664 aaKnown RBP16.92■□□□□ 0.3
HLA-DOA-202ENST00000374813 TEX14Q8IWB6 1497 aa16.9■□□□□ 0.3
HLA-DOA-202ENST00000374813 COL17A1Q9UMD9 1497 aaPredicted RBP16.9■□□□□ 0.3
HLA-DOA-202ENST00000374813 TTBK1Q5TCY1 1321 aaPredicted RBP16.9■□□□□ 0.3
HLA-DOA-202ENST00000374813 TNIKQ9UKE5 1360 aa16.89■□□□□ 0.29
HLA-DOA-202ENST00000374813 CARMIL2Q6F5E8 1435 aa16.88■□□□□ 0.29
HLA-DOA-202ENST00000374813 UHRF1BP1LA0JNW5 1464 aa16.83■□□□□ 0.28
HLA-DOA-202ENST00000374813 IGF1RP08069 1367 aa16.83■□□□□ 0.28
HLA-DOA-202ENST00000374813 EPRSP07814 1512 aaKnown RBP16.82■□□□□ 0.28
HLA-DOA-202ENST00000374813 UACAQ9BZF9 1416 aa16.81■□□□□ 0.28
HLA-DOA-202ENST00000374813 MAP3K4Q9Y6R4 1608 aa16.81■□□□□ 0.28
HLA-DOA-202ENST00000374813 CUL7Q14999 1698 aa16.8■□□□□ 0.28
HLA-DOA-202ENST00000374813 SUPT5HO00267 1087 aaKnown RBP16.76■□□□□ 0.27
HLA-DOA-202ENST00000374813 KIF27Q86VH2 1401 aa16.76■□□□□ 0.27
HLA-DOA-202ENST00000374813 KDM5BQ9UGL1 1544 aa16.75■□□□□ 0.27
HLA-DOA-202ENST00000374813 LMTK3Q96Q04 1460 aa16.72■□□□□ 0.27
HLA-DOA-202ENST00000374813 CARMIL1Q5VZK9 1371 aa16.71■□□□□ 0.27
HLA-DOA-202ENST00000374813 IQGAP2Q13576 1575 aa16.68■□□□□ 0.26
HLA-DOA-202ENST00000374813 CD109Q6YHK3 1445 aa16.68■□□□□ 0.26
HLA-DOA-202ENST00000374813 WDR7Q9Y4E6 1490 aa16.67■□□□□ 0.26
HLA-DOA-202ENST00000374813 ZCCHC11Q5TAX3 1644 aaKnown RBP16.67■□□□□ 0.26
HLA-DOA-202ENST00000374813 MAGI3Q5TCQ9 1506 aa16.66■□□□□ 0.26
HLA-DOA-202ENST00000374813 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
HLA-DOA-202ENST00000374813 KCNH8Q96L42 1107 aa16.63■□□□□ 0.25
HLA-DOA-202ENST00000374813 PTPRMP28827 1452 aa16.62■□□□□ 0.25
HLA-DOA-202ENST00000374813 SOCS7O14512 581 aa16.61■□□□□ 0.25
HLA-DOA-202ENST00000374813 CFAP43Q8NDM7 1665 aa16.61■□□□□ 0.25
HLA-DOA-202ENST00000374813 KIF21BO75037 1637 aa16.6■□□□□ 0.25
HLA-DOA-202ENST00000374813 ARAP3Q8WWN8 1544 aa16.56■□□□□ 0.24
HLA-DOA-202ENST00000374813 UGGT2Q9NYU1 1516 aa16.56■□□□□ 0.24
HLA-DOA-202ENST00000374813 PCF11O94913 1555 aaKnown RBP16.55■□□□□ 0.24
HLA-DOA-202ENST00000374813 PHLDB1Q86UU1 1377 aa16.55■□□□□ 0.24
HLA-DOA-202ENST00000374813 ADAMTSL3P82987 1691 aa16.55■□□□□ 0.24
HLA-DOA-202ENST00000374813 CERKQ8TCT0 537 aa16.53■□□□□ 0.24
HLA-DOA-202ENST00000374813 DISP3Q9P2K9 1392 aa16.52■□□□□ 0.24
HLA-DOA-202ENST00000374813 KIAA0556O60303 1618 aa16.52■□□□□ 0.23
HLA-DOA-202ENST00000374813 ARID4BQ4LE39 1312 aaPredicted RBP16.51■□□□□ 0.23
HLA-DOA-202ENST00000374813 ILDR2Q71H61 639 aa16.5■□□□□ 0.23
HLA-DOA-202ENST00000374813 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
HLA-DOA-202ENST00000374813 RAPGEF2Q9Y4G8 1499 aa16.47■□□□□ 0.23
HLA-DOA-202ENST00000374813 RAPGEF3O95398 923 aa16.46■□□□□ 0.23
HLA-DOA-202ENST00000374813 BCORL1Q5H9F3 1711 aa16.45■□□□□ 0.22
HLA-DOA-202ENST00000374813 HSPA2P54652 639 aa16.44■□□□□ 0.22
HLA-DOA-202ENST00000374813 GOLGA3Q08378 1498 aa16.43■□□□□ 0.22
HLA-DOA-202ENST00000374813 MADDQ8WXG6 1647 aa16.42■□□□□ 0.22
HLA-DOA-202ENST00000374813 ABCA8O94911 1581 aa16.41■□□□□ 0.22
HLA-DOA-202ENST00000374813 NEO1Q92859 1461 aa16.39■□□□□ 0.21
HLA-DOA-202ENST00000374813 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
HLA-DOA-202ENST00000374813 POGZQ7Z3K3 1410 aa16.36■□□□□ 0.21
HLA-DOA-202ENST00000374813 RIMS1Q86UR5 1692 aaKnown RBP16.35■□□□□ 0.21
HLA-DOA-202ENST00000374813 ABCA9Q8IUA7 1624 aa16.34■□□□□ 0.21
HLA-DOA-202ENST00000374813 PLPPR3Q6T4P5 718 aa16.34■□□□□ 0.21
HLA-DOA-202ENST00000374813 ATP10BO94823 1461 aa16.31■□□□□ 0.2
HLA-DOA-202ENST00000374813 ARID3CA6NKF2 412 aa16.3■□□□□ 0.2
HLA-DOA-202ENST00000374813 CTTNBP2Q8WZ74 1663 aa16.3■□□□□ 0.2
HLA-DOA-202ENST00000374813 FANCAO15360 1455 aa16.28■□□□□ 0.2
HLA-DOA-202ENST00000374813 AKNAQ7Z591 1439 aa16.27■□□□□ 0.19
HLA-DOA-202ENST00000374813 FRMPD1Q5SYB0 1578 aa16.26■□□□□ 0.19
HLA-DOA-202ENST00000374813 ARHGEF40Q8TER5 1519 aa16.26■□□□□ 0.19
HLA-DOA-202ENST00000374813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.26■□□□□ 0.19
HLA-DOA-202ENST00000374813 HNRNPUL2Q1KMD3 747 aaKnown RBP16.26■□□□□ 0.19
HLA-DOA-202ENST00000374813 DENND4BO75064 1496 aaPredicted RBP16.26■□□□□ 0.19
HLA-DOA-202ENST00000374813 YEATS2Q9ULM3 1422 aa16.26■□□□□ 0.19
HLA-DOA-202ENST00000374813 SPATA31D1Q6ZQQ2 1576 aa16.26■□□□□ 0.19
HLA-DOA-202ENST00000374813 FHOD3Q2V2M9 1422 aa16.23■□□□□ 0.19
HLA-DOA-202ENST00000374813 MLECQ14165 292 aa16.21■□□□□ 0.19
HLA-DOA-202ENST00000374813 P3H3Q8IVL6 736 aa16.2■□□□□ 0.18
HLA-DOA-202ENST00000374813 MAGI2Q86UL8 1455 aa16.2■□□□□ 0.18
HLA-DOA-202ENST00000374813 SETD1BQ9UPS6 1966 aaKnown RBP16.2■□□□□ 0.18
HLA-DOA-202ENST00000374813 RICTORQ6R327 1708 aa16.19■□□□□ 0.18
HLA-DOA-202ENST00000374813 PLEKHD1A6NEE1 506 aa16.18■□□□□ 0.18
HLA-DOA-202ENST00000374813 FER1L4A9Z1Z3 1794 aa16.18■□□□□ 0.18
HLA-DOA-202ENST00000374813 TTC37Q6PGP7 1564 aa16.17■□□□□ 0.18
HLA-DOA-202ENST00000374813 EFCAB5A4FU69 1503 aa16.17■□□□□ 0.18
HLA-DOA-202ENST00000374813 PREX1Q8TCU6 1659 aa16.17■□□□□ 0.18
HLA-DOA-202ENST00000374813 ZFYVE16Q7Z3T8 1539 aa16.15■□□□□ 0.18
HLA-DOA-202ENST00000374813 CFAP74Q9C0B2 1584 aa16.15■□□□□ 0.18
HLA-DOA-202ENST00000374813 STRCQ7RTU9 1775 aa16.15■□□□□ 0.18
HLA-DOA-202ENST00000374813 ZMYM4Q5VZL5 1548 aa16.14■□□□□ 0.18
HLA-DOA-202ENST00000374813 RAPGEF6Q8TEU7 1601 aa16.12■□□□□ 0.17
HLA-DOA-202ENST00000374813 PTPRTO14522 1441 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms