RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 CTTNBP2Q8WZ74 1663 aa24.41■■□□□ 1.5
HDAC8-209ENST00000373589 EIF4G3O43432 1585 aaKnown RBP24.38■■□□□ 1.49
HDAC8-209ENST00000373589 EFCAB5A4FU69 1503 aa24.33■■□□□ 1.49
HDAC8-209ENST00000373589 APLP2Q06481 763 aa24.31■■□□□ 1.48
HDAC8-209ENST00000373589 SNAPC4Q5SXM2 1469 aa24.29■■□□□ 1.48
HDAC8-209ENST00000373589 TTBK1Q5TCY1 1321 aaPredicted RBP24.27■■□□□ 1.48
HDAC8-209ENST00000373589 MAGI1Q96QZ7 1491 aaPredicted RBP24.25■■□□□ 1.47
HDAC8-209ENST00000373589 SAMD9Q5K651 1589 aa24.22■■□□□ 1.47
HDAC8-209ENST00000373589 FHOD3Q2V2M9 1422 aa24.21■■□□□ 1.47
HDAC8-209ENST00000373589 P3H3Q8IVL6 736 aa24.19■■□□□ 1.46
HDAC8-209ENST00000373589 GRIN2AQ12879 1464 aa24.18■■□□□ 1.46
HDAC8-209ENST00000373589 HRCP23327 699 aa24.18■■□□□ 1.46
HDAC8-209ENST00000373589 IQGAP2Q13576 1575 aa24.17■■□□□ 1.46
HDAC8-209ENST00000373589 SYNJ2O15056 1496 aa24.16■■□□□ 1.46
HDAC8-209ENST00000373589 MAP3K1Q13233 1512 aa24.16■■□□□ 1.46
HDAC8-209ENST00000373589 KANK4Q5T7N3 995 aaPredicted RBP24.13■■□□□ 1.45
HDAC8-209ENST00000373589 PCF11O94913 1555 aaKnown RBP24.11■■□□□ 1.45
HDAC8-209ENST00000373589 KIAA0586Q9BVV6 1533 aa24.11■■□□□ 1.45
HDAC8-209ENST00000373589 FMN1Q68DA7 1419 aa24.11■■□□□ 1.45
HDAC8-209ENST00000373589 CASKIN1Q8WXD9 1431 aa24.1■■□□□ 1.45
HDAC8-209ENST00000373589 FYCO1Q9BQS8 1478 aa24.09■■□□□ 1.45
HDAC8-209ENST00000373589 TIAM1Q13009 1591 aa24.09■■□□□ 1.45
HDAC8-209ENST00000373589 UGGT2Q9NYU1 1516 aa24.08■■□□□ 1.45
HDAC8-209ENST00000373589 CHMP7Q8WUX9 453 aaPredicted RBP24.08■■□□□ 1.45
HDAC8-209ENST00000373589 CEP170Q5SW79 1584 aa24.02■■□□□ 1.44
HDAC8-209ENST00000373589 NUP160Q12769 1436 aa24.02■■□□□ 1.44
HDAC8-209ENST00000373589 CFAP43Q8NDM7 1665 aa24.01■■□□□ 1.43
HDAC8-209ENST00000373589 LRRC9Q6ZRR7 1453 aa23.99■■□□□ 1.43
HDAC8-209ENST00000373589 FBLN2P98095 1184 aa23.97■■□□□ 1.43
HDAC8-209ENST00000373589 DISP1Q96F81 1524 aa23.95■■□□□ 1.42
HDAC8-209ENST00000373589 KIAA0556O60303 1618 aa23.93■■□□□ 1.42
HDAC8-209ENST00000373589 ATP1B4Q9UN42 357 aaPredicted RBP23.93■■□□□ 1.42
HDAC8-209ENST00000373589 RRBP1Q9P2E9 1410 aaKnown RBP23.91■■□□□ 1.42
HDAC8-209ENST00000373589 LRRIQ1Q96JM4 1722 aa23.86■■□□□ 1.41
HDAC8-209ENST00000373589 JPH4Q96JJ6 628 aa23.84■■□□□ 1.41
HDAC8-209ENST00000373589 HECW1Q76N89 1606 aa23.82■■□□□ 1.4
HDAC8-209ENST00000373589 CCDC18Q5T9S5 1454 aa23.81■■□□□ 1.4
HDAC8-209ENST00000373589 CCNB3Q8WWL7 1395 aa23.8■■□□□ 1.4
HDAC8-209ENST00000373589 CHD1O14646 1710 aa23.8■■□□□ 1.4
HDAC8-209ENST00000373589 PHLDB1Q86UU1 1377 aa23.8■■□□□ 1.4
HDAC8-209ENST00000373589 HNRNPUL2Q1KMD3 747 aaKnown RBP23.79■■□□□ 1.4
HDAC8-209ENST00000373589 CARMIL2Q6F5E8 1435 aa23.78■■□□□ 1.4
HDAC8-209ENST00000373589 ZEB1P37275 1124 aaPredicted RBP23.78■■□□□ 1.4
HDAC8-209ENST00000373589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.76■■□□□ 1.39
HDAC8-209ENST00000373589 EPRSP07814 1512 aaKnown RBP23.75■■□□□ 1.39
HDAC8-209ENST00000373589 MTUS2Q5JR59 1369 aa23.75■■□□□ 1.39
HDAC8-209ENST00000373589 EHBP1L1Q8N3D4 1523 aa23.72■■□□□ 1.39
HDAC8-209ENST00000373589 RAPGEF6Q8TEU7 1601 aa23.7■■□□□ 1.38
HDAC8-209ENST00000373589 MAGI3Q5TCQ9 1506 aa23.69■■□□□ 1.38
HDAC8-209ENST00000373589 NUP153P49790 1475 aaKnown RBP23.68■■□□□ 1.38
HDAC8-209ENST00000373589 CCER1Q8TC90 406 aaPredicted RBP23.67■■□□□ 1.38
HDAC8-209ENST00000373589 CDK13Q14004 1512 aaKnown RBP23.67■■□□□ 1.38
HDAC8-209ENST00000373589 PRG4Q92954 1404 aaPredicted RBP23.65■■□□□ 1.38
HDAC8-209ENST00000373589 NCOA2Q15596 1464 aa23.65■■□□□ 1.38
HDAC8-209ENST00000373589 SHROOM2Q13796 1616 aa23.64■■□□□ 1.38
HDAC8-209ENST00000373589 ARHGEF11O15085 1522 aa23.64■■□□□ 1.38
HDAC8-209ENST00000373589 SUPT6HQ7KZ85 1726 aaKnown RBP23.64■■□□□ 1.37
HDAC8-209ENST00000373589 PLB1Q6P1J6 1458 aa23.63■■□□□ 1.37
HDAC8-209ENST00000373589 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.63■■□□□ 1.37
HDAC8-209ENST00000373589 FGD6Q6ZV73 1430 aa23.6■■□□□ 1.37
HDAC8-209ENST00000373589 ABCA8O94911 1581 aa23.58■■□□□ 1.37
HDAC8-209ENST00000373589 MYOM3Q5VTT5 1437 aa23.58■■□□□ 1.36
HDAC8-209ENST00000373589 CLASP1Q7Z460 1538 aa23.58■■□□□ 1.36
HDAC8-209ENST00000373589 ARID3CA6NKF2 412 aa23.56■■□□□ 1.36
HDAC8-209ENST00000373589 FAM50AQ14320 339 aaKnown RBP23.54■■□□□ 1.36
HDAC8-209ENST00000373589 PTPRGP23470 1445 aa23.53■■□□□ 1.36
HDAC8-209ENST00000373589 CDK11AQ9UQ88 783 aaPredicted RBP23.51■■□□□ 1.35
HDAC8-209ENST00000373589 ITGAEP38570 1179 aa23.5■■□□□ 1.35
HDAC8-209ENST00000373589 TROQ12816 1431 aaPredicted RBP23.46■■□□□ 1.35
HDAC8-209ENST00000373589 ERCC6L2Q5T890 1561 aa23.46■■□□□ 1.35
HDAC8-209ENST00000373589 ATP10BO94823 1461 aa23.44■■□□□ 1.34
HDAC8-209ENST00000373589 TCOF1Q13428 1488 aaKnown RBP23.44■■□□□ 1.34
HDAC8-209ENST00000373589 MIA2Q96PC5 1412 aa23.44■■□□□ 1.34
HDAC8-209ENST00000373589 PTPN23Q9H3S7 1636 aa23.44■■□□□ 1.34
HDAC8-209ENST00000373589 UACAQ9BZF9 1416 aa23.41■■□□□ 1.34
HDAC8-209ENST00000373589 SETD5Q9C0A6 1442 aa23.4■■□□□ 1.34
HDAC8-209ENST00000373589 ADCY10Q96PN6 1610 aa23.39■■□□□ 1.33
HDAC8-209ENST00000373589 DHX57Q6P158 1386 aaKnown RBP23.39■■□□□ 1.33
HDAC8-209ENST00000373589 RAB3GAP2Q9H2M9 1393 aa23.39■■□□□ 1.33
HDAC8-209ENST00000373589 PTPRKQ15262 1439 aa23.36■■□□□ 1.33
HDAC8-209ENST00000373589 PLEKHD1A6NEE1 506 aa23.34■■□□□ 1.33
HDAC8-209ENST00000373589 CLSPNQ9HAW4 1339 aa23.34■■□□□ 1.33
HDAC8-209ENST00000373589 KIF14Q15058 1648 aa23.32■■□□□ 1.32
HDAC8-209ENST00000373589 ABCC2Q92887 1545 aa23.32■■□□□ 1.32
HDAC8-209ENST00000373589 GPATCH8Q9UKJ3 1502 aaKnown RBP23.28■■□□□ 1.32
HDAC8-209ENST00000373589 HFM1A2PYH4 1435 aa23.28■■□□□ 1.32
HDAC8-209ENST00000373589 UHRF1BP1LA0JNW5 1464 aa23.27■■□□□ 1.32
HDAC8-209ENST00000373589 ABCC10Q5T3U5 1492 aa23.27■■□□□ 1.32
HDAC8-209ENST00000373589 ITSN2Q9NZM3 1697 aa23.25■■□□□ 1.31
HDAC8-209ENST00000373589 OSCARQ8IYS5 282 aa23.25■■□□□ 1.31
HDAC8-209ENST00000373589 NAIPQ13075 1403 aa23.22■■□□□ 1.31
HDAC8-209ENST00000373589 CFDP1Q9UEE9 299 aaPredicted RBP23.21■■□□□ 1.31
HDAC8-209ENST00000373589 AKNAQ7Z591 1439 aa23.21■■□□□ 1.31
HDAC8-209ENST00000373589 ZNF644Q9H582 1327 aaPredicted RBP23.2■■□□□ 1.3
HDAC8-209ENST00000373589 KDM5BQ9UGL1 1544 aa23.19■■□□□ 1.3
HDAC8-209ENST00000373589 DNMT1P26358 1616 aaKnown RBP23.19■■□□□ 1.3
HDAC8-209ENST00000373589 CAMSAP2Q08AD1 1489 aa23.18■■□□□ 1.3
HDAC8-209ENST00000373589 DAPK1P53355 1430 aa23.18■■□□□ 1.3
HDAC8-209ENST00000373589 ABCC5O15440 1437 aa23.17■■□□□ 1.3
HDAC8-209ENST00000373589 CDC42BPAQ5VT25 1732 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms