RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 ABCC8Q09428 1581 aa15.17■□□□□ 0.02
SYNPO2L-201ENST00000372873 SOGA1O94964 1423 aa15.17■□□□□ 0.02
SYNPO2L-201ENST00000372873 PKNOX2Q96KN3 472 aa15.15■□□□□ 0.02
SYNPO2L-201ENST00000372873 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
SYNPO2L-201ENST00000372873 IPO9Q96P70 1041 aaKnown RBP15.14■□□□□ 0.01
SYNPO2L-201ENST00000372873 TIMELESSQ9UNS1 1208 aa15.12■□□□□ 0.01
SYNPO2L-201ENST00000372873 UBE2Q2Q8WVN8 375 aa15.12■□□□□ 0.01
SYNPO2L-201ENST00000372873 VSIG10Q8N0Z9 540 aa15.11■□□□□ 0.01
SYNPO2L-201ENST00000372873 NAP1L5Q96NT1 182 aaPredicted RBP15.11■□□□□ 0.01
SYNPO2L-201ENST00000372873 MRS2Q9HD23 443 aa15.1■□□□□ 0.01
SYNPO2L-201ENST00000372873 CCER2I3L3R5 266 aa15.1■□□□□ 0.01
SYNPO2L-201ENST00000372873 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
SYNPO2L-201ENST00000372873 P3H3Q8IVL6 736 aa15.04■□□□□ -0
SYNPO2L-201ENST00000372873 PAK3O75914 559 aaPredicted RBP15.04■□□□□ -0
SYNPO2L-201ENST00000372873 TNIKQ9UKE5 1360 aa15.04■□□□□ -0
SYNPO2L-201ENST00000372873 DDRGK1Q96HY6 314 aa15.04■□□□□ -0
SYNPO2L-201ENST00000372873 RSPH6AQ9H0K4 717 aa15.03■□□□□ -0
SYNPO2L-201ENST00000372873 TONSLQ96HA7 1378 aa15.03■□□□□ -0
SYNPO2L-201ENST00000372873 CLIP1P30622 1438 aa15.03■□□□□ -0
SYNPO2L-201ENST00000372873 GOLGA3Q08378 1498 aa15.01□□□□□ -0.01
SYNPO2L-201ENST00000372873 BAZ1BQ9UIG0 1483 aaKnown RBP15□□□□□ -0.01
SYNPO2L-201ENST00000372873 SENP3-EIF4A1A0A087X0R7 540 aa15□□□□□ -0.01
SYNPO2L-201ENST00000372873 EEA1Q15075 1411 aa14.99□□□□□ -0.01
SYNPO2L-201ENST00000372873 SIN3AQ96ST3 1273 aa14.98□□□□□ -0.01
SYNPO2L-201ENST00000372873 USP35Q9P2H5 1018 aa14.98□□□□□ -0.01
SYNPO2L-201ENST00000372873 TOP2AP11388 1531 aaKnown RBP14.98□□□□□ -0.01
SYNPO2L-201ENST00000372873 RUSC2Q8N2Y8 1516 aa14.98□□□□□ -0.01
SYNPO2L-201ENST00000372873 HSP90AA1P07900 732 aaKnown RBP14.95□□□□□ -0.02
SYNPO2L-201ENST00000372873 BRPF3Q9ULD4 1205 aa14.95□□□□□ -0.02
SYNPO2L-201ENST00000372873 GSE1Q14687 1217 aa14.94□□□□□ -0.02
SYNPO2L-201ENST00000372873 ARID4BQ4LE39 1312 aaPredicted RBP14.94□□□□□ -0.02
SYNPO2L-201ENST00000372873 SMARCA4P51532 1647 aa14.94□□□□□ -0.02
SYNPO2L-201ENST00000372873 HSP90AA2PQ14568 343 aaPredicted RBP14.93□□□□□ -0.02
SYNPO2L-201ENST00000372873 PODXL2Q9NZ53 605 aa14.93□□□□□ -0.02
SYNPO2L-201ENST00000372873 PNNQ9H307 717 aaKnown RBP14.9□□□□□ -0.02
SYNPO2L-201ENST00000372873 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
SYNPO2L-201ENST00000372873 TRIM44Q96DX7 344 aaPredicted RBP14.86□□□□□ -0.03
SYNPO2L-201ENST00000372873 DHX57Q6P158 1386 aaKnown RBP14.86□□□□□ -0.03
SYNPO2L-201ENST00000372873 TMC1Q8TDI8 760 aa14.85□□□□□ -0.03
SYNPO2L-201ENST00000372873 ANP32BQ92688 251 aaKnown RBP14.85□□□□□ -0.03
SYNPO2L-201ENST00000372873 ZNF326Q5BKZ1 582 aaKnown RBP14.85□□□□□ -0.03
SYNPO2L-201ENST00000372873 SMARCA2P51531 1590 aa14.84□□□□□ -0.03
SYNPO2L-201ENST00000372873 KANK4Q5T7N3 995 aaPredicted RBP14.81□□□□□ -0.04
SYNPO2L-201ENST00000372873 ARID3CA6NKF2 412 aa14.81□□□□□ -0.04
SYNPO2L-201ENST00000372873 A0A0U1RQG5 324 aaPredicted RBP14.8□□□□□ -0.04
SYNPO2L-201ENST00000372873 EIF4G2P78344 907 aaKnown RBP eCLIP14.8□□□□□ -0.04
SYNPO2L-201ENST00000372873 TCERG1O14776 1098 aaKnown RBP14.79□□□□□ -0.04
SYNPO2L-201ENST00000372873 L1TD1Q5T7N2 865 aaKnown RBP14.78□□□□□ -0.04
SYNPO2L-201ENST00000372873 ATAD2BQ9ULI0 1458 aa14.78□□□□□ -0.04
SYNPO2L-201ENST00000372873 UPF2Q9HAU5 1272 aaKnown RBP14.78□□□□□ -0.04
SYNPO2L-201ENST00000372873 SLC4A3P48751 1232 aa14.77□□□□□ -0.05
SYNPO2L-201ENST00000372873 BECN1Q14457 450 aa14.75□□□□□ -0.05
SYNPO2L-201ENST00000372873 PDE4AP27815 886 aa14.74□□□□□ -0.05
SYNPO2L-201ENST00000372873 FRAT1Q92837 279 aaPredicted RBP14.74□□□□□ -0.05
SYNPO2L-201ENST00000372873 KIF27Q86VH2 1401 aa14.73□□□□□ -0.05
SYNPO2L-201ENST00000372873 ZMYND15Q9H091 742 aa14.73□□□□□ -0.05
SYNPO2L-201ENST00000372873 RAPGEF2Q9Y4G8 1499 aa14.73□□□□□ -0.05
SYNPO2L-201ENST00000372873 VPS8Q8N3P4 1428 aa14.72□□□□□ -0.05
SYNPO2L-201ENST00000372873 TNNT2P45379 298 aaPredicted RBP14.72□□□□□ -0.05
SYNPO2L-201ENST00000372873 NFKBIBQ15653 356 aa14.71□□□□□ -0.05
SYNPO2L-201ENST00000372873 RGS3P49796 1198 aa14.7□□□□□ -0.06
SYNPO2L-201ENST00000372873 PPP1R15AO75807 674 aaPredicted RBP14.7□□□□□ -0.06
SYNPO2L-201ENST00000372873 CANXP27824 592 aaKnown RBP14.69□□□□□ -0.06
SYNPO2L-201ENST00000372873 FAM43AQ8N2R8 423 aa14.68□□□□□ -0.06
SYNPO2L-201ENST00000372873 CCNB3Q8WWL7 1395 aa14.68□□□□□ -0.06
SYNPO2L-201ENST00000372873 GZF1Q9H116 711 aaPredicted RBP14.67□□□□□ -0.06
SYNPO2L-201ENST00000372873 ARID3AQ99856 593 aa14.67□□□□□ -0.06
SYNPO2L-201ENST00000372873 NUDCQ9Y266 331 aa14.65□□□□□ -0.06
SYNPO2L-201ENST00000372873 RAB3GAP2Q9H2M9 1393 aa14.65□□□□□ -0.06
SYNPO2L-201ENST00000372873 SLKQ9H2G2 1235 aaPredicted RBP14.64□□□□□ -0.07
SYNPO2L-201ENST00000372873 CUX2O14529 1486 aa14.62□□□□□ -0.07
SYNPO2L-201ENST00000372873 GOLGA6L3A6NEY3 463 aa14.61□□□□□ -0.07
SYNPO2L-201ENST00000372873 CHIC2Q9UKJ5 165 aa14.61□□□□□ -0.07
SYNPO2L-201ENST00000372873 ZBED9Q6R2W3 1325 aa14.61□□□□□ -0.07
SYNPO2L-201ENST00000372873 HSPA5P11021 654 aaKnown RBP14.6□□□□□ -0.07
SYNPO2L-201ENST00000372873 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.6□□□□□ -0.07
SYNPO2L-201ENST00000372873 FBLN2P98095 1184 aa14.59□□□□□ -0.07
SYNPO2L-201ENST00000372873 AMER1Q5JTC6 1135 aaPredicted RBP14.58□□□□□ -0.07
SYNPO2L-201ENST00000372873 SYNJ1O43426 1573 aa14.58□□□□□ -0.08
SYNPO2L-201ENST00000372873 CARMIL1Q5VZK9 1371 aa14.57□□□□□ -0.08
SYNPO2L-201ENST00000372873 FRAT2O75474 233 aaPredicted RBP14.56□□□□□ -0.08
SYNPO2L-201ENST00000372873 SPRYD3Q8NCJ5 442 aa14.56□□□□□ -0.08
SYNPO2L-201ENST00000372873 MYH16Q9H6N6 1097 aa14.56□□□□□ -0.08
SYNPO2L-201ENST00000372873 RCAN3Q9UKA8 241 aa14.56□□□□□ -0.08
SYNPO2L-201ENST00000372873 RRP9O43818 475 aaKnown RBP14.56□□□□□ -0.08
SYNPO2L-201ENST00000372873 EXOC6Q8TAG9 804 aa14.56□□□□□ -0.08
SYNPO2L-201ENST00000372873 SETD5Q9C0A6 1442 aa14.56□□□□□ -0.08
SYNPO2L-201ENST00000372873 NCLP19338 710 aaKnown RBP14.55□□□□□ -0.08
SYNPO2L-201ENST00000372873 C11orf95C9JLR9 678 aaPredicted RBP14.55□□□□□ -0.08
SYNPO2L-201ENST00000372873 PLEKHG5O94827 1062 aa14.55□□□□□ -0.08
SYNPO2L-201ENST00000372873 CDK11BP21127 795 aaKnown RBP14.55□□□□□ -0.08
SYNPO2L-201ENST00000372873 MS4A1P11836 297 aa14.54□□□□□ -0.08
SYNPO2L-201ENST00000372873 MSNP26038 577 aaKnown RBP14.54□□□□□ -0.08
SYNPO2L-201ENST00000372873 BICRAQ9NZM4 1560 aa14.53□□□□□ -0.08
SYNPO2L-201ENST00000372873 MTUS2Q5JR59 1369 aa14.52□□□□□ -0.08
SYNPO2L-201ENST00000372873 PRKRIP1Q9H875 184 aaPredicted RBP14.52□□□□□ -0.08
SYNPO2L-201ENST00000372873 DNTTIP2Q5QJE6 756 aaKnown RBP14.51□□□□□ -0.09
SYNPO2L-201ENST00000372873 WASHC2AQ641Q2 1341 aa14.5□□□□□ -0.09
SYNPO2L-201ENST00000372873 BACH2Q9BYV9 841 aa14.48□□□□□ -0.09
SYNPO2L-201ENST00000372873 RRP7BPQ9NSQ0 103 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms