RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 TMC1Q8TDI8 760 aa14.16□□□□□ -0.14
NUP188-201ENST00000372577 VPS8Q8N3P4 1428 aa14.16□□□□□ -0.14
NUP188-201ENST00000372577 FKBP8Q14318 412 aa14.15□□□□□ -0.14
NUP188-201ENST00000372577 RRP7BPQ9NSQ0 103 aa14.15□□□□□ -0.14
NUP188-201ENST00000372577 CCNB3Q8WWL7 1395 aa14.14□□□□□ -0.15
NUP188-201ENST00000372577 FAM9BQ8IZU0 186 aa14.13□□□□□ -0.15
NUP188-201ENST00000372577 CFDP1Q9UEE9 299 aaPredicted RBP14.13□□□□□ -0.15
NUP188-201ENST00000372577 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
NUP188-201ENST00000372577 WIZO95785 1651 aa14.12□□□□□ -0.15
NUP188-201ENST00000372577 TIMELESSQ9UNS1 1208 aa14.12□□□□□ -0.15
NUP188-201ENST00000372577 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.11□□□□□ -0.15
NUP188-201ENST00000372577 MRS2Q9HD23 443 aa14.11□□□□□ -0.15
NUP188-201ENST00000372577 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
NUP188-201ENST00000372577 MIER1Q8N108 512 aa14.1□□□□□ -0.15
NUP188-201ENST00000372577 PDS5BQ9NTI5 1447 aa14.09□□□□□ -0.15
NUP188-201ENST00000372577 WDR43Q15061 677 aaKnown RBP eCLIP14.08□□□□□ -0.16
NUP188-201ENST00000372577 KDM2AQ9Y2K7 1162 aa14.08□□□□□ -0.16
NUP188-201ENST00000372577 SMARCA4P51532 1647 aa14.07□□□□□ -0.16
NUP188-201ENST00000372577 CDCA8Q53HL2 280 aa14.05□□□□□ -0.16
NUP188-201ENST00000372577 ARHGAP35Q9NRY4 1499 aa14.03□□□□□ -0.16
NUP188-201ENST00000372577 SLC24A1O60721 1099 aa14.02□□□□□ -0.16
NUP188-201ENST00000372577 FMN1Q68DA7 1419 aa14.02□□□□□ -0.16
NUP188-201ENST00000372577 ATAD2BQ9ULI0 1458 aa14.02□□□□□ -0.17
NUP188-201ENST00000372577 EIF4G1Q04637 1599 aaKnown RBP14.01□□□□□ -0.17
NUP188-201ENST00000372577 KCNH8Q96L42 1107 aa14.01□□□□□ -0.17
NUP188-201ENST00000372577 UPF2Q9HAU5 1272 aaKnown RBP14.01□□□□□ -0.17
NUP188-201ENST00000372577 CCDC136Q96JN2 1154 aa14□□□□□ -0.17
NUP188-201ENST00000372577 CADPSQ9ULU8 1353 aa14□□□□□ -0.17
NUP188-201ENST00000372577 SETD5Q9C0A6 1442 aa13.99□□□□□ -0.17
NUP188-201ENST00000372577 CARMIL2Q6F5E8 1435 aa13.96□□□□□ -0.17
NUP188-201ENST00000372577 RAPGEF2Q9Y4G8 1499 aa13.95□□□□□ -0.18
NUP188-201ENST00000372577 HIRIP3Q9BW71 556 aaPredicted RBP13.94□□□□□ -0.18
NUP188-201ENST00000372577 CARD11Q9BXL7 1154 aa13.94□□□□□ -0.18
NUP188-201ENST00000372577 NPM2Q86SE8 214 aaKnown RBP13.92□□□□□ -0.18
NUP188-201ENST00000372577 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
NUP188-201ENST00000372577 SALL2Q9Y467 1007 aaPredicted RBP13.91□□□□□ -0.18
NUP188-201ENST00000372577 SIN3AQ96ST3 1273 aa13.9□□□□□ -0.18
NUP188-201ENST00000372577 RGL3Q3MIN7 710 aa13.89□□□□□ -0.19
NUP188-201ENST00000372577 CFAP53Q96M91 514 aa13.89□□□□□ -0.19
NUP188-201ENST00000372577 KNSTRNQ9Y448 316 aa13.89□□□□□ -0.19
NUP188-201ENST00000372577 KANK1Q14678 1352 aa13.88□□□□□ -0.19
NUP188-201ENST00000372577 PPP1R15AO75807 674 aaPredicted RBP13.87□□□□□ -0.19
NUP188-201ENST00000372577 KANK4Q5T7N3 995 aaPredicted RBP13.86□□□□□ -0.19
NUP188-201ENST00000372577 CCER2I3L3R5 266 aa13.85□□□□□ -0.19
NUP188-201ENST00000372577 TDRD9Q8NDG6 1382 aaKnown RBP13.84□□□□□ -0.19
NUP188-201ENST00000372577 HSP90AA1P07900 732 aaKnown RBP13.84□□□□□ -0.19
NUP188-201ENST00000372577 BCL11AQ9H165 835 aa13.84□□□□□ -0.19
NUP188-201ENST00000372577 RAB3GAP2Q9H2M9 1393 aa13.82□□□□□ -0.2
NUP188-201ENST00000372577 MYH16Q9H6N6 1097 aa13.81□□□□□ -0.2
NUP188-201ENST00000372577 ANP32BQ92688 251 aaKnown RBP13.81□□□□□ -0.2
NUP188-201ENST00000372577 CCDC18Q5T9S5 1454 aa13.8□□□□□ -0.2
NUP188-201ENST00000372577 ANKRD30AQ9BXX3 1397 aa13.8□□□□□ -0.2
NUP188-201ENST00000372577 TMF1P82094 1093 aa13.79□□□□□ -0.2
NUP188-201ENST00000372577 FANCD2Q9BXW9 1451 aa13.79□□□□□ -0.2
NUP188-201ENST00000372577 DDRGK1Q96HY6 314 aa13.78□□□□□ -0.2
NUP188-201ENST00000372577 RSPH4AQ5TD94 716 aa13.77□□□□□ -0.2
NUP188-201ENST00000372577 EIF5BO60841 1220 aaKnown RBP13.77□□□□□ -0.21
NUP188-201ENST00000372577 PLPPR3Q6T4P5 718 aa13.76□□□□□ -0.21
NUP188-201ENST00000372577 NUDCQ9Y266 331 aa13.76□□□□□ -0.21
NUP188-201ENST00000372577 FHOD3Q2V2M9 1422 aa13.76□□□□□ -0.21
NUP188-201ENST00000372577 DCAF11Q8TEB1 546 aa13.75□□□□□ -0.21
NUP188-201ENST00000372577 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
NUP188-201ENST00000372577 IRX6P78412 446 aaPredicted RBP13.74□□□□□ -0.21
NUP188-201ENST00000372577 PPP4R2Q9NY27 417 aa13.74□□□□□ -0.21
NUP188-201ENST00000372577 MPHOSPH9Q99550 1183 aa13.73□□□□□ -0.21
NUP188-201ENST00000372577 EFCAB2Q5VUJ9 269 aa13.73□□□□□ -0.21
NUP188-201ENST00000372577 PKD2Q13563 968 aa13.73□□□□□ -0.21
NUP188-201ENST00000372577 PNNQ9H307 717 aaKnown RBP13.73□□□□□ -0.21
NUP188-201ENST00000372577 SUPT16HQ9Y5B9 1047 aaKnown RBP13.72□□□□□ -0.21
NUP188-201ENST00000372577 HSPA5P11021 654 aaKnown RBP13.72□□□□□ -0.21
NUP188-201ENST00000372577 HDGFP51858 240 aaKnown RBP13.71□□□□□ -0.21
NUP188-201ENST00000372577 BECN1Q14457 450 aa13.71□□□□□ -0.21
NUP188-201ENST00000372577 POGKQ9P215 609 aa13.7□□□□□ -0.22
NUP188-201ENST00000372577 MAPK8IP3Q9UPT6 1336 aa13.7□□□□□ -0.22
NUP188-201ENST00000372577 MS4A1P11836 297 aa13.7□□□□□ -0.22
NUP188-201ENST00000372577 CHMP4BQ9H444 224 aaKnown RBP13.7□□□□□ -0.22
NUP188-201ENST00000372577 RUSC2Q8N2Y8 1516 aa13.7□□□□□ -0.22
NUP188-201ENST00000372577 ARID4BQ4LE39 1312 aaPredicted RBP13.69□□□□□ -0.22
NUP188-201ENST00000372577 NUP155O75694 1391 aa13.68□□□□□ -0.22
NUP188-201ENST00000372577 ERICH6BQ5W0A0 696 aa13.67□□□□□ -0.22
NUP188-201ENST00000372577 FGD5Q6ZNL6 1462 aa13.66□□□□□ -0.22
NUP188-201ENST00000372577 KTN1Q86UP2 1357 aaKnown RBP13.66□□□□□ -0.22
NUP188-201ENST00000372577 ANP32EQ9BTT0 268 aa13.66□□□□□ -0.22
NUP188-201ENST00000372577 RALBP1Q15311 655 aa13.65□□□□□ -0.22
NUP188-201ENST00000372577 KIF21BO75037 1637 aa13.64□□□□□ -0.23
NUP188-201ENST00000372577 FTSJ3Q8IY81 847 aaKnown RBP13.64□□□□□ -0.23
NUP188-201ENST00000372577 IGF1RP08069 1367 aa13.64□□□□□ -0.23
NUP188-201ENST00000372577 ROCK2O75116 1388 aaKnown RBP13.64□□□□□ -0.23
NUP188-201ENST00000372577 EIF3AQ14152 1382 aaKnown RBP13.63□□□□□ -0.23
NUP188-201ENST00000372577 CC2D1BQ5T0F9 858 aaKnown RBP13.63□□□□□ -0.23
NUP188-201ENST00000372577 ERICH3Q5RHP9 1530 aa13.63□□□□□ -0.23
NUP188-201ENST00000372577 JPH4Q96JJ6 628 aa13.63□□□□□ -0.23
NUP188-201ENST00000372577 DHX57Q6P158 1386 aaKnown RBP13.63□□□□□ -0.23
NUP188-201ENST00000372577 GAPVD1Q14C86 1478 aa13.63□□□□□ -0.23
NUP188-201ENST00000372577 C14orf37Q86TY3 774 aa13.62□□□□□ -0.23
NUP188-201ENST00000372577 CUX1P39880 1505 aa13.61□□□□□ -0.23
NUP188-201ENST00000372577 CASC1Q6TDU7 716 aa13.59□□□□□ -0.23
NUP188-201ENST00000372577 NBR1Q14596 966 aa13.58□□□□□ -0.24
NUP188-201ENST00000372577 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.24
NUP188-201ENST00000372577 HAP1P54257 671 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms