RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 GRIN2BQ13224 1484 aa38.37■■■■□ 3.73
CTSA-203ENST00000372459 EFCAB5A4FU69 1503 aa38.34■■■■□ 3.73
CTSA-203ENST00000372459 FHAD1B1AJZ9 1412 aa38.34■■■■□ 3.73
CTSA-203ENST00000372459 ZNF608Q9ULD9 1512 aaPredicted RBP38.32■■■■□ 3.73
CTSA-203ENST00000372459 ADAMTS12P58397 1594 aa38.3■■■■□ 3.72
CTSA-203ENST00000372459 EIF4G3O43432 1585 aaKnown RBP38.2■■■■□ 3.71
CTSA-203ENST00000372459 P3H3Q8IVL6 736 aa38.15■■■■□ 3.7
CTSA-203ENST00000372459 FHOD3Q2V2M9 1422 aa38.15■■■■□ 3.7
CTSA-203ENST00000372459 MAP3K1Q13233 1512 aa38.13■■■■□ 3.69
CTSA-203ENST00000372459 KANK4Q5T7N3 995 aaPredicted RBP38.11■■■■□ 3.69
CTSA-203ENST00000372459 ZEB1P37275 1124 aaPredicted RBP38.1■■■■□ 3.69
CTSA-203ENST00000372459 SAMD9Q5K651 1589 aa38.1■■■■□ 3.69
CTSA-203ENST00000372459 SNAPC4Q5SXM2 1469 aa38.07■■■■□ 3.68
CTSA-203ENST00000372459 PCF11O94913 1555 aaKnown RBP38.06■■■■□ 3.68
CTSA-203ENST00000372459 TIAM1Q13009 1591 aa38.05■■■■□ 3.68
CTSA-203ENST00000372459 FMN1Q68DA7 1419 aa38.02■■■■□ 3.68
CTSA-203ENST00000372459 FYCO1Q9BQS8 1478 aa38■■■■□ 3.67
CTSA-203ENST00000372459 IQGAP2Q13576 1575 aa37.99■■■■□ 3.67
CTSA-203ENST00000372459 MAGI1Q96QZ7 1491 aaPredicted RBP37.98■■■■□ 3.67
CTSA-203ENST00000372459 CASKIN1Q8WXD9 1431 aa37.98■■■■□ 3.67
CTSA-203ENST00000372459 CFAP43Q8NDM7 1665 aa37.93■■■■□ 3.66
CTSA-203ENST00000372459 GRIN2AQ12879 1464 aa37.91■■■■□ 3.66
CTSA-203ENST00000372459 LRRC9Q6ZRR7 1453 aa37.88■■■■□ 3.65
CTSA-203ENST00000372459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.86■■■■□ 3.65
CTSA-203ENST00000372459 ATP1B4Q9UN42 357 aaPredicted RBP37.84■■■■□ 3.65
CTSA-203ENST00000372459 SYNJ2O15056 1496 aa37.84■■■■□ 3.65
CTSA-203ENST00000372459 KIAA0586Q9BVV6 1533 aa37.83■■■■□ 3.65
CTSA-203ENST00000372459 RRBP1Q9P2E9 1410 aaKnown RBP37.82■■■■□ 3.65
CTSA-203ENST00000372459 HNRNPUL2Q1KMD3 747 aaKnown RBP37.81■■■■□ 3.64
CTSA-203ENST00000372459 CCER1Q8TC90 406 aaPredicted RBP37.8■■■■□ 3.64
CTSA-203ENST00000372459 UGGT2Q9NYU1 1516 aa37.8■■■■□ 3.64
CTSA-203ENST00000372459 CHMP7Q8WUX9 453 aaPredicted RBP37.77■■■■□ 3.64
CTSA-203ENST00000372459 CCNB3Q8WWL7 1395 aa37.68■■■■□ 3.62
CTSA-203ENST00000372459 CEP170Q5SW79 1584 aa37.65■■■■□ 3.62
CTSA-203ENST00000372459 FBLN2P98095 1184 aa37.62■■■■□ 3.61
CTSA-203ENST00000372459 LRRIQ1Q96JM4 1722 aa37.6■■■■□ 3.61
CTSA-203ENST00000372459 KIAA0556O60303 1618 aa37.6■■■■□ 3.61
CTSA-203ENST00000372459 NUP160Q12769 1436 aa37.59■■■■□ 3.61
CTSA-203ENST00000372459 DISP1Q96F81 1524 aa37.58■■■■□ 3.61
CTSA-203ENST00000372459 PHLDB1Q86UU1 1377 aa37.56■■■■□ 3.6
CTSA-203ENST00000372459 HECW1Q76N89 1606 aa37.55■■■■□ 3.6
CTSA-203ENST00000372459 CCDC18Q5T9S5 1454 aa37.54■■■■□ 3.6
CTSA-203ENST00000372459 MTUS2Q5JR59 1369 aa37.51■■■■□ 3.6
CTSA-203ENST00000372459 EHBP1L1Q8N3D4 1523 aa37.43■■■■□ 3.58
CTSA-203ENST00000372459 EPRSP07814 1512 aaKnown RBP37.39■■■■□ 3.58
CTSA-203ENST00000372459 JPH4Q96JJ6 628 aa37.37■■■■□ 3.57
CTSA-203ENST00000372459 CARMIL2Q6F5E8 1435 aa37.36■■■■□ 3.57
CTSA-203ENST00000372459 SUPT6HQ7KZ85 1726 aaKnown RBP37.35■■■■□ 3.57
CTSA-203ENST00000372459 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.31■■■■□ 3.56
CTSA-203ENST00000372459 NCOA2Q15596 1464 aa37.3■■■■□ 3.56
CTSA-203ENST00000372459 RAPGEF6Q8TEU7 1601 aa37.3■■■■□ 3.56
CTSA-203ENST00000372459 ITGAEP38570 1179 aa37.29■■■■□ 3.56
CTSA-203ENST00000372459 FAM50AQ14320 339 aaKnown RBP37.29■■■■□ 3.56
CTSA-203ENST00000372459 MAGI3Q5TCQ9 1506 aa37.29■■■■□ 3.56
CTSA-203ENST00000372459 CHD1O14646 1710 aa37.28■■■■□ 3.56
CTSA-203ENST00000372459 CDK13Q14004 1512 aaKnown RBP37.27■■■■□ 3.56
CTSA-203ENST00000372459 FGD6Q6ZV73 1430 aa37.26■■■■□ 3.56
CTSA-203ENST00000372459 ARHGEF11O15085 1522 aa37.22■■■■□ 3.55
CTSA-203ENST00000372459 NUP153P49790 1475 aaKnown RBP37.22■■■■□ 3.55
CTSA-203ENST00000372459 MYOM3Q5VTT5 1437 aa37.2■■■■□ 3.55
CTSA-203ENST00000372459 ARID3CA6NKF2 412 aa37.13■■■■□ 3.53
CTSA-203ENST00000372459 PLB1Q6P1J6 1458 aa37.11■■■■□ 3.53
CTSA-203ENST00000372459 DHX57Q6P158 1386 aaKnown RBP37.11■■■■□ 3.53
CTSA-203ENST00000372459 CLSPNQ9HAW4 1339 aa37.08■■■■□ 3.53
CTSA-203ENST00000372459 PRG4Q92954 1404 aaPredicted RBP37.07■■■■□ 3.53
CTSA-203ENST00000372459 CDK11AQ9UQ88 783 aaPredicted RBP37.07■■■■□ 3.52
CTSA-203ENST00000372459 SETD5Q9C0A6 1442 aa37.07■■■■□ 3.52
CTSA-203ENST00000372459 RAB3GAP2Q9H2M9 1393 aa37.05■■■■□ 3.52
CTSA-203ENST00000372459 PTPN23Q9H3S7 1636 aa37.02■■■■□ 3.52
CTSA-203ENST00000372459 ABCA8O94911 1581 aa37.01■■■■□ 3.51
CTSA-203ENST00000372459 SHROOM2Q13796 1616 aa37■■■■□ 3.51
CTSA-203ENST00000372459 TCOF1Q13428 1488 aaKnown RBP36.96■■■■□ 3.51
CTSA-203ENST00000372459 MIA2Q96PC5 1412 aa36.96■■■■□ 3.51
CTSA-203ENST00000372459 PTPRGP23470 1445 aa36.92■■■■□ 3.5
CTSA-203ENST00000372459 TROQ12816 1431 aaPredicted RBP36.92■■■■□ 3.5
CTSA-203ENST00000372459 PTPRKQ15262 1439 aa36.85■■■■□ 3.49
CTSA-203ENST00000372459 CLASP1Q7Z460 1538 aa36.82■■■■□ 3.48
CTSA-203ENST00000372459 ADCY10Q96PN6 1610 aa36.81■■■■□ 3.48
CTSA-203ENST00000372459 ATP10BO94823 1461 aa36.8■■■■□ 3.48
CTSA-203ENST00000372459 HFM1A2PYH4 1435 aa36.79■■■■□ 3.48
CTSA-203ENST00000372459 PLEKHD1A6NEE1 506 aa36.73■■■■□ 3.47
CTSA-203ENST00000372459 UACAQ9BZF9 1416 aa36.71■■■■□ 3.47
CTSA-203ENST00000372459 ITSN2Q9NZM3 1697 aa36.71■■■■□ 3.47
CTSA-203ENST00000372459 KIF14Q15058 1648 aa36.7■■■■□ 3.47
CTSA-203ENST00000372459 ERCC6L2Q5T890 1561 aa36.7■■■■□ 3.47
CTSA-203ENST00000372459 MAPKBP1O60336 1514 aa36.68■■■■□ 3.46
CTSA-203ENST00000372459 NAIPQ13075 1403 aa36.67■■■■□ 3.46
CTSA-203ENST00000372459 AKNAQ7Z591 1439 aa36.63■■■■□ 3.45
CTSA-203ENST00000372459 GPATCH8Q9UKJ3 1502 aaKnown RBP36.63■■■■□ 3.45
CTSA-203ENST00000372459 DNMT1P26358 1616 aaKnown RBP36.59■■■■□ 3.45
CTSA-203ENST00000372459 CFDP1Q9UEE9 299 aaPredicted RBP36.58■■■■□ 3.45
CTSA-203ENST00000372459 GCC2Q8IWJ2 1684 aa36.58■■■■□ 3.45
CTSA-203ENST00000372459 DAPK1P53355 1430 aa36.57■■■■□ 3.45
CTSA-203ENST00000372459 ABCC2Q92887 1545 aa36.57■■■■□ 3.45
CTSA-203ENST00000372459 CHIC2Q9UKJ5 165 aa36.56■■■■□ 3.44
CTSA-203ENST00000372459 ABCC10Q5T3U5 1492 aa36.55■■■■□ 3.44
CTSA-203ENST00000372459 CAMSAP2Q08AD1 1489 aa36.53■■■■□ 3.44
CTSA-203ENST00000372459 ZNF644Q9H582 1327 aaPredicted RBP36.53■■■■□ 3.44
CTSA-203ENST00000372459 ABCC5O15440 1437 aa36.52■■■■□ 3.44
CTSA-203ENST00000372459 RRP7BPQ9NSQ0 103 aa36.51■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms