RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 ADAMTS12P58397 1594 aa24.18■■□□□ 1.46
GTF3C5-204ENST00000372108 EIF4G3O43432 1585 aaKnown RBP24.17■■□□□ 1.46
GTF3C5-204ENST00000372108 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
GTF3C5-204ENST00000372108 APLP2Q06481 763 aa24.12■■□□□ 1.45
GTF3C5-204ENST00000372108 SNAPC4Q5SXM2 1469 aa24.09■■□□□ 1.45
GTF3C5-204ENST00000372108 EFCAB5A4FU69 1503 aa24.08■■□□□ 1.45
GTF3C5-204ENST00000372108 P3H3Q8IVL6 736 aa24.05■■□□□ 1.44
GTF3C5-204ENST00000372108 FHOD3Q2V2M9 1422 aa24.01■■□□□ 1.43
GTF3C5-204ENST00000372108 MAGI1Q96QZ7 1491 aaPredicted RBP24.01■■□□□ 1.43
GTF3C5-204ENST00000372108 SAMD9Q5K651 1589 aa23.98■■□□□ 1.43
GTF3C5-204ENST00000372108 HRCP23327 699 aa23.98■■□□□ 1.43
GTF3C5-204ENST00000372108 GRIN2AQ12879 1464 aa23.96■■□□□ 1.43
GTF3C5-204ENST00000372108 KANK4Q5T7N3 995 aaPredicted RBP23.95■■□□□ 1.42
GTF3C5-204ENST00000372108 IQGAP2Q13576 1575 aa23.95■■□□□ 1.42
GTF3C5-204ENST00000372108 SYNJ2O15056 1496 aa23.93■■□□□ 1.42
GTF3C5-204ENST00000372108 PCF11O94913 1555 aaKnown RBP23.92■■□□□ 1.42
GTF3C5-204ENST00000372108 MAP3K1Q13233 1512 aa23.9■■□□□ 1.42
GTF3C5-204ENST00000372108 CHMP7Q8WUX9 453 aaPredicted RBP23.89■■□□□ 1.42
GTF3C5-204ENST00000372108 KIAA0586Q9BVV6 1533 aa23.88■■□□□ 1.41
GTF3C5-204ENST00000372108 FMN1Q68DA7 1419 aa23.88■■□□□ 1.41
GTF3C5-204ENST00000372108 TIAM1Q13009 1591 aa23.87■■□□□ 1.41
GTF3C5-204ENST00000372108 CASKIN1Q8WXD9 1431 aa23.87■■□□□ 1.41
GTF3C5-204ENST00000372108 FYCO1Q9BQS8 1478 aa23.86■■□□□ 1.41
GTF3C5-204ENST00000372108 UGGT2Q9NYU1 1516 aa23.84■■□□□ 1.41
GTF3C5-204ENST00000372108 FBLN2P98095 1184 aa23.83■■□□□ 1.41
GTF3C5-204ENST00000372108 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
GTF3C5-204ENST00000372108 ATP1B4Q9UN42 357 aaPredicted RBP23.8■■□□□ 1.4
GTF3C5-204ENST00000372108 CFAP43Q8NDM7 1665 aa23.79■■□□□ 1.4
GTF3C5-204ENST00000372108 NUP160Q12769 1436 aa23.78■■□□□ 1.4
GTF3C5-204ENST00000372108 LRRC9Q6ZRR7 1453 aa23.77■■□□□ 1.4
GTF3C5-204ENST00000372108 DISP1Q96F81 1524 aa23.74■■□□□ 1.39
GTF3C5-204ENST00000372108 KIAA0556O60303 1618 aa23.71■■□□□ 1.39
GTF3C5-204ENST00000372108 LRRIQ1Q96JM4 1722 aa23.68■■□□□ 1.38
GTF3C5-204ENST00000372108 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
GTF3C5-204ENST00000372108 HNRNPUL2Q1KMD3 747 aaKnown RBP23.65■■□□□ 1.38
GTF3C5-204ENST00000372108 JPH4Q96JJ6 628 aa23.64■■□□□ 1.37
GTF3C5-204ENST00000372108 CHD1O14646 1710 aa23.62■■□□□ 1.37
GTF3C5-204ENST00000372108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.61■■□□□ 1.37
GTF3C5-204ENST00000372108 HECW1Q76N89 1606 aa23.6■■□□□ 1.37
GTF3C5-204ENST00000372108 PHLDB1Q86UU1 1377 aa23.6■■□□□ 1.37
GTF3C5-204ENST00000372108 CCNB3Q8WWL7 1395 aa23.6■■□□□ 1.37
GTF3C5-204ENST00000372108 CCDC18Q5T9S5 1454 aa23.57■■□□□ 1.36
GTF3C5-204ENST00000372108 CARMIL2Q6F5E8 1435 aa23.56■■□□□ 1.36
GTF3C5-204ENST00000372108 ZEB1P37275 1124 aaPredicted RBP23.56■■□□□ 1.36
GTF3C5-204ENST00000372108 MTUS2Q5JR59 1369 aa23.55■■□□□ 1.36
GTF3C5-204ENST00000372108 EPRSP07814 1512 aaKnown RBP23.55■■□□□ 1.36
GTF3C5-204ENST00000372108 CCER1Q8TC90 406 aaPredicted RBP23.51■■□□□ 1.35
GTF3C5-204ENST00000372108 MAGI3Q5TCQ9 1506 aa23.5■■□□□ 1.35
GTF3C5-204ENST00000372108 RAPGEF6Q8TEU7 1601 aa23.5■■□□□ 1.35
GTF3C5-204ENST00000372108 CDK13Q14004 1512 aaKnown RBP23.49■■□□□ 1.35
GTF3C5-204ENST00000372108 EHBP1L1Q8N3D4 1523 aa23.49■■□□□ 1.35
GTF3C5-204ENST00000372108 NUP153P49790 1475 aaKnown RBP23.47■■□□□ 1.35
GTF3C5-204ENST00000372108 PRG4Q92954 1404 aaPredicted RBP23.46■■□□□ 1.35
GTF3C5-204ENST00000372108 ARID3CA6NKF2 412 aa23.45■■□□□ 1.35
GTF3C5-204ENST00000372108 NCOA2Q15596 1464 aa23.44■■□□□ 1.34
GTF3C5-204ENST00000372108 PLB1Q6P1J6 1458 aa23.44■■□□□ 1.34
GTF3C5-204ENST00000372108 SUPT6HQ7KZ85 1726 aaKnown RBP23.43■■□□□ 1.34
GTF3C5-204ENST00000372108 SHROOM2Q13796 1616 aa23.42■■□□□ 1.34
GTF3C5-204ENST00000372108 ARHGEF11O15085 1522 aa23.4■■□□□ 1.34
GTF3C5-204ENST00000372108 FGD6Q6ZV73 1430 aa23.39■■□□□ 1.33
GTF3C5-204ENST00000372108 ITGAEP38570 1179 aa23.39■■□□□ 1.33
GTF3C5-204ENST00000372108 FAM50AQ14320 339 aaKnown RBP23.39■■□□□ 1.33
GTF3C5-204ENST00000372108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.37■■□□□ 1.33
GTF3C5-204ENST00000372108 ABCA8O94911 1581 aa23.36■■□□□ 1.33
GTF3C5-204ENST00000372108 MYOM3Q5VTT5 1437 aa23.36■■□□□ 1.33
GTF3C5-204ENST00000372108 CLASP1Q7Z460 1538 aa23.35■■□□□ 1.33
GTF3C5-204ENST00000372108 PTPRGP23470 1445 aa23.33■■□□□ 1.33
GTF3C5-204ENST00000372108 CDK11AQ9UQ88 783 aaPredicted RBP23.3■■□□□ 1.32
GTF3C5-204ENST00000372108 ERCC6L2Q5T890 1561 aa23.29■■□□□ 1.32
GTF3C5-204ENST00000372108 ATP10BO94823 1461 aa23.25■■□□□ 1.31
GTF3C5-204ENST00000372108 TROQ12816 1431 aaPredicted RBP23.25■■□□□ 1.31
GTF3C5-204ENST00000372108 PTPN23Q9H3S7 1636 aa23.24■■□□□ 1.31
GTF3C5-204ENST00000372108 TCOF1Q13428 1488 aaKnown RBP23.2■■□□□ 1.31
GTF3C5-204ENST00000372108 MIA2Q96PC5 1412 aa23.2■■□□□ 1.3
GTF3C5-204ENST00000372108 UACAQ9BZF9 1416 aa23.2■■□□□ 1.3
GTF3C5-204ENST00000372108 SETD5Q9C0A6 1442 aa23.19■■□□□ 1.3
GTF3C5-204ENST00000372108 DHX57Q6P158 1386 aaKnown RBP23.18■■□□□ 1.3
GTF3C5-204ENST00000372108 RAB3GAP2Q9H2M9 1393 aa23.18■■□□□ 1.3
GTF3C5-204ENST00000372108 PTPRKQ15262 1439 aa23.17■■□□□ 1.3
GTF3C5-204ENST00000372108 ADCY10Q96PN6 1610 aa23.16■■□□□ 1.3
GTF3C5-204ENST00000372108 PLEKHD1A6NEE1 506 aa23.15■■□□□ 1.3
GTF3C5-204ENST00000372108 KIF14Q15058 1648 aa23.14■■□□□ 1.3
GTF3C5-204ENST00000372108 ABCC2Q92887 1545 aa23.11■■□□□ 1.29
GTF3C5-204ENST00000372108 CLSPNQ9HAW4 1339 aa23.08■■□□□ 1.29
GTF3C5-204ENST00000372108 GPATCH8Q9UKJ3 1502 aaKnown RBP23.08■■□□□ 1.28
GTF3C5-204ENST00000372108 OSCARQ8IYS5 282 aa23.06■■□□□ 1.28
GTF3C5-204ENST00000372108 HFM1A2PYH4 1435 aa23.05■■□□□ 1.28
GTF3C5-204ENST00000372108 ABCC10Q5T3U5 1492 aa23.05■■□□□ 1.28
GTF3C5-204ENST00000372108 ZNF644Q9H582 1327 aaPredicted RBP23.05■■□□□ 1.28
GTF3C5-204ENST00000372108 ITSN2Q9NZM3 1697 aa23.05■■□□□ 1.28
GTF3C5-204ENST00000372108 UHRF1BP1LA0JNW5 1464 aa23.03■■□□□ 1.28
GTF3C5-204ENST00000372108 CFDP1Q9UEE9 299 aaPredicted RBP23.03■■□□□ 1.28
GTF3C5-204ENST00000372108 NAIPQ13075 1403 aa23.01■■□□□ 1.27
GTF3C5-204ENST00000372108 CHIC2Q9UKJ5 165 aa22.99■■□□□ 1.27
GTF3C5-204ENST00000372108 CDC42BPAQ5VT25 1732 aa22.98■■□□□ 1.27
GTF3C5-204ENST00000372108 DAPK1P53355 1430 aa22.98■■□□□ 1.27
GTF3C5-204ENST00000372108 CAMSAP2Q08AD1 1489 aa22.98■■□□□ 1.27
GTF3C5-204ENST00000372108 DNMT1P26358 1616 aaKnown RBP22.97■■□□□ 1.27
GTF3C5-204ENST00000372108 ABCC5O15440 1437 aa22.97■■□□□ 1.27
GTF3C5-204ENST00000372108 KDM5BQ9UGL1 1544 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms