RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 FHAD1B1AJZ9 1412 aa27.47■■□□□ 1.99
SSBP3-203ENST00000371319 PPARGC1BQ86YN6 1023 aaKnown RBP27.43■■□□□ 1.98
SSBP3-203ENST00000371319 SNAPC4Q5SXM2 1469 aa27.36■■□□□ 1.97
SSBP3-203ENST00000371319 EFCAB5A4FU69 1503 aa27.32■■□□□ 1.96
SSBP3-203ENST00000371319 MAGI1Q96QZ7 1491 aaPredicted RBP27.29■■□□□ 1.96
SSBP3-203ENST00000371319 SAMD9Q5K651 1589 aa27.24■■□□□ 1.95
SSBP3-203ENST00000371319 GRIN2AQ12879 1464 aa27.21■■□□□ 1.95
SSBP3-203ENST00000371319 IQGAP2Q13576 1575 aa27.19■■□□□ 1.94
SSBP3-203ENST00000371319 SYNJ2O15056 1496 aa27.19■■□□□ 1.94
SSBP3-203ENST00000371319 FHOD3Q2V2M9 1422 aa27.18■■□□□ 1.94
SSBP3-203ENST00000371319 TTBK1Q5TCY1 1321 aaPredicted RBP27.17■■□□□ 1.94
SSBP3-203ENST00000371319 APLP2Q06481 763 aa27.17■■□□□ 1.94
SSBP3-203ENST00000371319 P3H3Q8IVL6 736 aa27.15■■□□□ 1.94
SSBP3-203ENST00000371319 PCF11O94913 1555 aaKnown RBP27.12■■□□□ 1.93
SSBP3-203ENST00000371319 KIAA0586Q9BVV6 1533 aa27.09■■□□□ 1.93
SSBP3-203ENST00000371319 UGGT2Q9NYU1 1516 aa27.08■■□□□ 1.93
SSBP3-203ENST00000371319 MAP3K1Q13233 1512 aa27.07■■□□□ 1.92
SSBP3-203ENST00000371319 CEP170Q5SW79 1584 aa27.07■■□□□ 1.92
SSBP3-203ENST00000371319 CHMP7Q8WUX9 453 aaPredicted RBP27.05■■□□□ 1.92
SSBP3-203ENST00000371319 TIAM1Q13009 1591 aa27.05■■□□□ 1.92
SSBP3-203ENST00000371319 FYCO1Q9BQS8 1478 aa27.03■■□□□ 1.92
SSBP3-203ENST00000371319 FMN1Q68DA7 1419 aa27.03■■□□□ 1.92
SSBP3-203ENST00000371319 CASKIN1Q8WXD9 1431 aa27.03■■□□□ 1.92
SSBP3-203ENST00000371319 NUP160Q12769 1436 aa27.02■■□□□ 1.92
SSBP3-203ENST00000371319 CFAP43Q8NDM7 1665 aa27.02■■□□□ 1.92
SSBP3-203ENST00000371319 KANK4Q5T7N3 995 aaPredicted RBP27.01■■□□□ 1.92
SSBP3-203ENST00000371319 FBLN2P98095 1184 aa26.95■■□□□ 1.9
SSBP3-203ENST00000371319 KIAA0556O60303 1618 aa26.94■■□□□ 1.9
SSBP3-203ENST00000371319 DISP1Q96F81 1524 aa26.94■■□□□ 1.9
SSBP3-203ENST00000371319 CHD1O14646 1710 aa26.93■■□□□ 1.9
SSBP3-203ENST00000371319 LRRIQ1Q96JM4 1722 aa26.9■■□□□ 1.9
SSBP3-203ENST00000371319 LRRC9Q6ZRR7 1453 aa26.89■■□□□ 1.9
SSBP3-203ENST00000371319 HRCP23327 699 aa26.87■■□□□ 1.89
SSBP3-203ENST00000371319 ATP1B4Q9UN42 357 aaPredicted RBP26.83■■□□□ 1.89
SSBP3-203ENST00000371319 HECW1Q76N89 1606 aa26.79■■□□□ 1.88
SSBP3-203ENST00000371319 RRBP1Q9P2E9 1410 aaKnown RBP26.76■■□□□ 1.87
SSBP3-203ENST00000371319 JPH4Q96JJ6 628 aa26.75■■□□□ 1.87
SSBP3-203ENST00000371319 CCDC18Q5T9S5 1454 aa26.72■■□□□ 1.87
SSBP3-203ENST00000371319 CARMIL2Q6F5E8 1435 aa26.71■■□□□ 1.87
SSBP3-203ENST00000371319 RAPGEF6Q8TEU7 1601 aa26.69■■□□□ 1.86
SSBP3-203ENST00000371319 EPRSP07814 1512 aaKnown RBP26.67■■□□□ 1.86
SSBP3-203ENST00000371319 SHROOM2Q13796 1616 aa26.67■■□□□ 1.86
SSBP3-203ENST00000371319 PHLDB1Q86UU1 1377 aa26.66■■□□□ 1.86
SSBP3-203ENST00000371319 EHBP1L1Q8N3D4 1523 aa26.64■■□□□ 1.86
SSBP3-203ENST00000371319 CCNB3Q8WWL7 1395 aa26.63■■□□□ 1.85
SSBP3-203ENST00000371319 MAGI3Q5TCQ9 1506 aa26.63■■□□□ 1.85
SSBP3-203ENST00000371319 CDK13Q14004 1512 aaKnown RBP26.62■■□□□ 1.85
SSBP3-203ENST00000371319 MTUS2Q5JR59 1369 aa26.62■■□□□ 1.85
SSBP3-203ENST00000371319 NUP153P49790 1475 aaKnown RBP26.61■■□□□ 1.85
SSBP3-203ENST00000371319 PRG4Q92954 1404 aaPredicted RBP26.6■■□□□ 1.85
SSBP3-203ENST00000371319 HNRNPUL2Q1KMD3 747 aaKnown RBP26.6■■□□□ 1.85
SSBP3-203ENST00000371319 CLASP1Q7Z460 1538 aa26.6■■□□□ 1.85
SSBP3-203ENST00000371319 SUPT6HQ7KZ85 1726 aaKnown RBP26.58■■□□□ 1.85
SSBP3-203ENST00000371319 PLB1Q6P1J6 1458 aa26.56■■□□□ 1.84
SSBP3-203ENST00000371319 ABCA8O94911 1581 aa26.55■■□□□ 1.84
SSBP3-203ENST00000371319 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
SSBP3-203ENST00000371319 NCOA2Q15596 1464 aa26.53■■□□□ 1.84
SSBP3-203ENST00000371319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.5■■□□□ 1.83
SSBP3-203ENST00000371319 ARID3CA6NKF2 412 aa26.47■■□□□ 1.83
SSBP3-203ENST00000371319 ERCC6L2Q5T890 1561 aa26.47■■□□□ 1.83
SSBP3-203ENST00000371319 FGD6Q6ZV73 1430 aa26.45■■□□□ 1.83
SSBP3-203ENST00000371319 ZEB1P37275 1124 aaPredicted RBP26.45■■□□□ 1.82
SSBP3-203ENST00000371319 PTPRGP23470 1445 aa26.44■■□□□ 1.82
SSBP3-203ENST00000371319 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.43■■□□□ 1.829e-7■■■□□ 17.8
SSBP3-203ENST00000371319 MYOM3Q5VTT5 1437 aa26.43■■□□□ 1.82
SSBP3-203ENST00000371319 CCER1Q8TC90 406 aaPredicted RBP26.39■■□□□ 1.82
SSBP3-203ENST00000371319 FAM50AQ14320 339 aaKnown RBP26.37■■□□□ 1.81
SSBP3-203ENST00000371319 ATP10BO94823 1461 aa26.35■■□□□ 1.81
SSBP3-203ENST00000371319 TROQ12816 1431 aaPredicted RBP26.34■■□□□ 1.81
SSBP3-203ENST00000371319 ADCY10Q96PN6 1610 aa26.34■■□□□ 1.81
SSBP3-203ENST00000371319 PTPN23Q9H3S7 1636 aa26.33■■□□□ 1.81
SSBP3-203ENST00000371319 CDK11AQ9UQ88 783 aaPredicted RBP26.33■■□□□ 1.81
SSBP3-203ENST00000371319 ITGAEP38570 1179 aa26.32■■□□□ 1.8
SSBP3-203ENST00000371319 UACAQ9BZF9 1416 aa26.31■■□□□ 1.8
SSBP3-203ENST00000371319 TCOF1Q13428 1488 aaKnown RBP26.3■■□□□ 1.8
SSBP3-203ENST00000371319 KIF14Q15058 1648 aa26.26■■□□□ 1.79
SSBP3-203ENST00000371319 MIA2Q96PC5 1412 aa26.26■■□□□ 1.79
SSBP3-203ENST00000371319 ABCC2Q92887 1545 aa26.25■■□□□ 1.79
SSBP3-203ENST00000371319 PTPRKQ15262 1439 aa26.19■■□□□ 1.78
SSBP3-203ENST00000371319 UHRF1BP1LA0JNW5 1464 aa26.18■■□□□ 1.78
SSBP3-203ENST00000371319 ITSN2Q9NZM3 1697 aa26.18■■□□□ 1.78
SSBP3-203ENST00000371319 SETD5Q9C0A6 1442 aa26.18■■□□□ 1.78
SSBP3-203ENST00000371319 PLEKHD1A6NEE1 506 aa26.17■■□□□ 1.78
SSBP3-203ENST00000371319 OSCARQ8IYS5 282 aa26.17■■□□□ 1.78
SSBP3-203ENST00000371319 RAB3GAP2Q9H2M9 1393 aa26.15■■□□□ 1.78
SSBP3-203ENST00000371319 ABCC10Q5T3U5 1492 aa26.15■■□□□ 1.78
SSBP3-203ENST00000371319 DHX57Q6P158 1386 aaKnown RBP26.14■■□□□ 1.77
SSBP3-203ENST00000371319 GPATCH8Q9UKJ3 1502 aaKnown RBP26.13■■□□□ 1.77
SSBP3-203ENST00000371319 CDC42BPAQ5VT25 1732 aa26.11■■□□□ 1.77
SSBP3-203ENST00000371319 ZCCHC11Q5TAX3 1644 aaKnown RBP26.11■■□□□ 1.77
SSBP3-203ENST00000371319 KDM5BQ9UGL1 1544 aa26.08■■□□□ 1.77
SSBP3-203ENST00000371319 DNMT1P26358 1616 aaKnown RBP26.06■■□□□ 1.76
SSBP3-203ENST00000371319 HFM1A2PYH4 1435 aa26.05■■□□□ 1.76
SSBP3-203ENST00000371319 CAMSAP2Q08AD1 1489 aa26.03■■□□□ 1.76
SSBP3-203ENST00000371319 ZNF644Q9H582 1327 aaPredicted RBP26.02■■□□□ 1.76
SSBP3-203ENST00000371319 DAPK1P53355 1430 aa26.01■■□□□ 1.75
SSBP3-203ENST00000371319 CLSPNQ9HAW4 1339 aa26.01■■□□□ 1.75
SSBP3-203ENST00000371319 CFDP1Q9UEE9 299 aaPredicted RBP26.01■■□□□ 1.75
SSBP3-203ENST00000371319 GCC2Q8IWJ2 1684 aa26■■□□□ 1.75
SSBP3-203ENST00000371319 NAIPQ13075 1403 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 580 ms