RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 JPH4Q96JJ6 628 aa27.77■■■□□ 2.04
SSR4-204ENST00000370087 ADCY10Q96PN6 1610 aa27.75■■■□□ 2.03
SSR4-204ENST00000370087 DIP2BQ9P265 1576 aa27.73■■■□□ 2.03
SSR4-204ENST00000370087 ABCC10Q5T3U5 1492 aa27.72■■■□□ 2.03
SSR4-204ENST00000370087 MAPKBP1O60336 1514 aa27.71■■■□□ 2.03
SSR4-204ENST00000370087 FAM69CQ0P6D2 419 aa27.65■■■□□ 2.02
SSR4-204ENST00000370087 TSPOAP1O95153 1857 aa27.58■■■□□ 2.01
SSR4-204ENST00000370087 KDM6BO15054 1643 aa27.56■■■□□ 2
SSR4-204ENST00000370087 KIAA0586Q9BVV6 1533 aa27.55■■■□□ 2
SSR4-204ENST00000370087 CUL7Q14999 1698 aa27.54■■■□□ 2
SSR4-204ENST00000370087 NPM1P06748 294 aaKnown RBP eCLIP27.53■■■□□ 2
SSR4-204ENST00000370087 IGF1RP08069 1367 aa27.49■■□□□ 1.99
SSR4-204ENST00000370087 KDM4FA0A1W2PPD8 638 aa27.44■■□□□ 1.98
SSR4-204ENST00000370087 KIF27Q86VH2 1401 aa27.42■■□□□ 1.98
SSR4-204ENST00000370087 PPRC1Q5VV67 1664 aaKnown RBP27.39■■□□□ 1.97
SSR4-204ENST00000370087 PTPRGP23470 1445 aa27.35■■□□□ 1.97
SSR4-204ENST00000370087 ABCC2Q92887 1545 aa27.32■■□□□ 1.96
SSR4-204ENST00000370087 TTBK1Q5TCY1 1321 aaPredicted RBP27.32■■□□□ 1.96
SSR4-204ENST00000370087 IQGAP2Q13576 1575 aa27.29■■□□□ 1.96
SSR4-204ENST00000370087 CARMIL1Q5VZK9 1371 aa27.28■■□□□ 1.96
SSR4-204ENST00000370087 GLI2P10070 1586 aa27.27■■□□□ 1.96
SSR4-204ENST00000370087 ASXL2Q76L83 1435 aa27.27■■□□□ 1.96
SSR4-204ENST00000370087 TNIKQ9UKE5 1360 aa27.27■■□□□ 1.96
SSR4-204ENST00000370087 CARMIL2Q6F5E8 1435 aa27.23■■□□□ 1.95
SSR4-204ENST00000370087 DISP1Q96F81 1524 aa27.21■■□□□ 1.95
SSR4-204ENST00000370087 UHRF1BP1LA0JNW5 1464 aa27.21■■□□□ 1.95
SSR4-204ENST00000370087 PLB1Q6P1J6 1458 aa27.21■■□□□ 1.95
SSR4-204ENST00000370087 MAP3K4Q9Y6R4 1608 aa27.17■■□□□ 1.94
SSR4-204ENST00000370087 ADGRL1O94910 1474 aa27.16■■□□□ 1.94
SSR4-204ENST00000370087 UACAQ9BZF9 1416 aa27.16■■□□□ 1.94
SSR4-204ENST00000370087 COL17A1Q9UMD9 1497 aaPredicted RBP27.15■■□□□ 1.94
SSR4-204ENST00000370087 ZCCHC11Q5TAX3 1644 aaKnown RBP27.15■■□□□ 1.94
SSR4-204ENST00000370087 EPRSP07814 1512 aaKnown RBP27.12■■□□□ 1.93
SSR4-204ENST00000370087 KDM5BQ9UGL1 1544 aa27.11■■□□□ 1.93
SSR4-204ENST00000370087 UGGT2Q9NYU1 1516 aa27.09■■□□□ 1.93
SSR4-204ENST00000370087 KIAA0556O60303 1618 aa27.08■■□□□ 1.93
SSR4-204ENST00000370087 ILDR1Q86SU0 546 aaPredicted RBP27.02■■□□□ 1.92
SSR4-204ENST00000370087 RAPGEF2Q9Y4G8 1499 aa27.01■■□□□ 1.91
SSR4-204ENST00000370087 TEX14Q8IWB6 1497 aa26.99■■□□□ 1.91
SSR4-204ENST00000370087 HECW2Q9P2P5 1572 aa26.97■■□□□ 1.91
SSR4-204ENST00000370087 CTTNBP2Q8WZ74 1663 aa26.95■■□□□ 1.91
SSR4-204ENST00000370087 WDR7Q9Y4E6 1490 aa26.93■■□□□ 1.9
SSR4-204ENST00000370087 CFAP43Q8NDM7 1665 aa26.86■■□□□ 1.89
SSR4-204ENST00000370087 ABCA8O94911 1581 aa26.86■■□□□ 1.89
SSR4-204ENST00000370087 MAGI3Q5TCQ9 1506 aa26.8■■□□□ 1.88
SSR4-204ENST00000370087 KIF21BO75037 1637 aa26.79■■□□□ 1.88
SSR4-204ENST00000370087 CD109Q6YHK3 1445 aa26.78■■□□□ 1.88
SSR4-204ENST00000370087 GOLGA3Q08378 1498 aa26.74■■□□□ 1.87
SSR4-204ENST00000370087 KCNH8Q96L42 1107 aa26.71■■□□□ 1.87
SSR4-204ENST00000370087 PRXQ9BXM0 1461 aa26.66■■□□□ 1.86
SSR4-204ENST00000370087 ARAP3Q8WWN8 1544 aa26.61■■□□□ 1.85
SSR4-204ENST00000370087 ARID3CA6NKF2 412 aa26.59■■□□□ 1.85
SSR4-204ENST00000370087 ABCA9Q8IUA7 1624 aa26.58■■□□□ 1.85
SSR4-204ENST00000370087 ATP10BO94823 1461 aa26.58■■□□□ 1.85
SSR4-204ENST00000370087 ADAMTSL3P82987 1691 aa26.55■■□□□ 1.84
SSR4-204ENST00000370087 SAMD9Q5K651 1589 aa26.52■■□□□ 1.84
SSR4-204ENST00000370087 FRMPD1Q5SYB0 1578 aa26.51■■□□□ 1.83
SSR4-204ENST00000370087 P3H3Q8IVL6 736 aa26.51■■□□□ 1.83
SSR4-204ENST00000370087 RAPGEF6Q8TEU7 1601 aa26.48■■□□□ 1.83
SSR4-204ENST00000370087 PTPRMP28827 1452 aa26.47■■□□□ 1.83
SSR4-204ENST00000370087 BCORL1Q5H9F3 1711 aa26.45■■□□□ 1.82
SSR4-204ENST00000370087 RAPGEF3O95398 923 aa26.43■■□□□ 1.82
SSR4-204ENST00000370087 MADDQ8WXG6 1647 aa26.43■■□□□ 1.82
SSR4-204ENST00000370087 NEO1Q92859 1461 aa26.41■■□□□ 1.82
SSR4-204ENST00000370087 PHLDB1Q86UU1 1377 aa26.38■■□□□ 1.81
SSR4-204ENST00000370087 NUP153P49790 1475 aaKnown RBP26.37■■□□□ 1.81
SSR4-204ENST00000370087 ARHGEF40Q8TER5 1519 aa26.34■■□□□ 1.81
SSR4-204ENST00000370087 RICTORQ6R327 1708 aa26.34■■□□□ 1.81
SSR4-204ENST00000370087 PCF11O94913 1555 aaKnown RBP26.33■■□□□ 1.81
SSR4-204ENST00000370087 RIMS1Q86UR5 1692 aaKnown RBP26.32■■□□□ 1.8
SSR4-204ENST00000370087 FBXO41Q8TF61 875 aa26.32■■□□□ 1.8
SSR4-204ENST00000370087 LMTK3Q96Q04 1460 aa26.3■■□□□ 1.8
SSR4-204ENST00000370087 SIGLEC1Q9BZZ2 1709 aa26.3■■□□□ 1.8
SSR4-204ENST00000370087 FHOD3Q2V2M9 1422 aa26.28■■□□□ 1.8
SSR4-204ENST00000370087 FAM9AQ8IZU1 332 aaPredicted RBP26.26■■□□□ 1.79
SSR4-204ENST00000370087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.25■■□□□ 1.79
SSR4-204ENST00000370087 HNRNPUL2Q1KMD3 747 aaKnown RBP26.25■■□□□ 1.79
SSR4-204ENST00000370087 TTC37Q6PGP7 1564 aa26.24■■□□□ 1.79
SSR4-204ENST00000370087 ARID4BQ4LE39 1312 aaPredicted RBP26.23■■□□□ 1.79
SSR4-204ENST00000370087 CSRNP3Q8WYN3 585 aa26.23■■□□□ 1.79
SSR4-204ENST00000370087 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.22■■□□□ 1.794e-9■□□□□ 10.3
SSR4-204ENST00000370087 CFAP74Q9C0B2 1584 aa26.21■■□□□ 1.79
SSR4-204ENST00000370087 DENND4BO75064 1496 aaPredicted RBP26.21■■□□□ 1.79
SSR4-204ENST00000370087 RANGAP1P46060 587 aaPredicted RBP26.2■■□□□ 1.78
SSR4-204ENST00000370087 AKNAQ7Z591 1439 aa26.19■■□□□ 1.78
SSR4-204ENST00000370087 ZMYM4Q5VZL5 1548 aa26.19■■□□□ 1.78
SSR4-204ENST00000370087 FANCAO15360 1455 aa26.18■■□□□ 1.78
SSR4-204ENST00000370087 YEATS2Q9ULM3 1422 aa26.14■■□□□ 1.78
SSR4-204ENST00000370087 ZFYVE16Q7Z3T8 1539 aa26.14■■□□□ 1.77
SSR4-204ENST00000370087 CDK13Q14004 1512 aaKnown RBP26.11■■□□□ 1.77
SSR4-204ENST00000370087 HECW1Q76N89 1606 aa26.1■■□□□ 1.77
SSR4-204ENST00000370087 FER1L4A9Z1Z3 1794 aa26.1■■□□□ 1.77
SSR4-204ENST00000370087 EFCAB5A4FU69 1503 aa26.1■■□□□ 1.77
SSR4-204ENST00000370087 PLEKHD1A6NEE1 506 aa26.09■■□□□ 1.77
SSR4-204ENST00000370087 HSPA2P54652 639 aa26.09■■□□□ 1.77
SSR4-204ENST00000370087 PLPPR3Q6T4P5 718 aa26.07■■□□□ 1.76
SSR4-204ENST00000370087 EEA1Q15075 1411 aa26.05■■□□□ 1.76
SSR4-204ENST00000370087 POGZQ7Z3K3 1410 aa26.03■■□□□ 1.76
SSR4-204ENST00000370087 MAGI2Q86UL8 1455 aa26.01■■□□□ 1.75
SSR4-204ENST00000370087 SCAPERQ9BY12 1400 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms