RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 PPP1R15AO75807 674 aaPredicted RBP13.28□□□□□ -0.28
SIM1-202ENST00000369208 HSP90AA2PQ14568 343 aaPredicted RBP13.28□□□□□ -0.28
SIM1-202ENST00000369208 TONSLQ96HA7 1378 aa13.27□□□□□ -0.28
SIM1-202ENST00000369208 HAP1P54257 671 aaPredicted RBP13.26□□□□□ -0.29
SIM1-202ENST00000369208 A0A0G2JS52 829 aa13.26□□□□□ -0.29
SIM1-202ENST00000369208 LAS1LQ9Y4W2 734 aaKnown RBP13.23□□□□□ -0.29
SIM1-202ENST00000369208 RB1CC1Q8TDY2 1594 aa13.23□□□□□ -0.29
SIM1-202ENST00000369208 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.23□□□□□ -0.29
SIM1-202ENST00000369208 USP35Q9P2H5 1018 aa13.22□□□□□ -0.29
SIM1-202ENST00000369208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.2□□□□□ -0.3
SIM1-202ENST00000369208 MYH16Q9H6N6 1097 aa13.2□□□□□ -0.3
SIM1-202ENST00000369208 RTN4Q9NQC3 1192 aaKnown RBP13.19□□□□□ -0.3
SIM1-202ENST00000369208 GOLGA6L22H0YM25 854 aa13.18□□□□□ -0.3
SIM1-202ENST00000369208 CCDC136Q96JN2 1154 aa13.18□□□□□ -0.3
SIM1-202ENST00000369208 CALRP27797 417 aaKnown RBP13.18□□□□□ -0.3
SIM1-202ENST00000369208 PNNQ9H307 717 aaKnown RBP13.17□□□□□ -0.3
SIM1-202ENST00000369208 WDR43Q15061 677 aaKnown RBP eCLIP13.17□□□□□ -0.3
SIM1-202ENST00000369208 VSIG10Q8N0Z9 540 aa13.17□□□□□ -0.3
SIM1-202ENST00000369208 MTUS2Q5JR59 1369 aa13.15□□□□□ -0.3
SIM1-202ENST00000369208 CHAF1AQ13111 956 aaPredicted RBP13.15□□□□□ -0.3
SIM1-202ENST00000369208 TNNT3P45378 269 aaPredicted RBP13.14□□□□□ -0.31
SIM1-202ENST00000369208 UBE2Q2Q8WVN8 375 aa13.14□□□□□ -0.31
SIM1-202ENST00000369208 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.14□□□□□ -0.31
SIM1-202ENST00000369208 ERCC6Q03468 1493 aa13.14□□□□□ -0.31
SIM1-202ENST00000369208 SUPT16HQ9Y5B9 1047 aaKnown RBP13.13□□□□□ -0.31
SIM1-202ENST00000369208 PLEKHD1A6NEE1 506 aa13.12□□□□□ -0.31
SIM1-202ENST00000369208 RSF1Q96T23 1441 aaPredicted RBP13.12□□□□□ -0.31
SIM1-202ENST00000369208 MSNP26038 577 aaKnown RBP13.11□□□□□ -0.31
SIM1-202ENST00000369208 RBM19Q9Y4C8 960 aaKnown RBP13.09□□□□□ -0.31
SIM1-202ENST00000369208 DNTTIP2Q5QJE6 756 aaKnown RBP13.09□□□□□ -0.31
SIM1-202ENST00000369208 CDCA8Q53HL2 280 aa13.09□□□□□ -0.31
SIM1-202ENST00000369208 ZBTB7CA1YPR0 619 aa13.08□□□□□ -0.31
SIM1-202ENST00000369208 MTERF4Q7Z6M4 381 aaKnown RBP13.08□□□□□ -0.31
SIM1-202ENST00000369208 A0A0U1RQG5 324 aaPredicted RBP13.08□□□□□ -0.32
SIM1-202ENST00000369208 HDGFP51858 240 aaKnown RBP13.07□□□□□ -0.32
SIM1-202ENST00000369208 MAP7D2Q96T17 732 aa13.07□□□□□ -0.32
SIM1-202ENST00000369208 TMC1Q8TDI8 760 aa13.07□□□□□ -0.32
SIM1-202ENST00000369208 NPHP1O15259 732 aa13.05□□□□□ -0.32
SIM1-202ENST00000369208 CFAP53Q96M91 514 aa13.04□□□□□ -0.32
SIM1-202ENST00000369208 APPP05067 770 aa13.04□□□□□ -0.32
SIM1-202ENST00000369208 KCNH8Q96L42 1107 aa13.03□□□□□ -0.32
SIM1-202ENST00000369208 PPP4R2Q9NY27 417 aa13.02□□□□□ -0.32
SIM1-202ENST00000369208 GOLGA6L3A6NEY3 463 aa13.02□□□□□ -0.33
SIM1-202ENST00000369208 PTMAP06454 111 aaKnown RBP13.01□□□□□ -0.33
SIM1-202ENST00000369208 EIF4G2P78344 907 aaKnown RBP eCLIP13.01□□□□□ -0.33
SIM1-202ENST00000369208 HNRNPUQ00839 825 aaKnown RBP eCLIP13□□□□□ -0.33
SIM1-202ENST00000369208 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
SIM1-202ENST00000369208 TAF3Q5VWG9 929 aa13□□□□□ -0.33
SIM1-202ENST00000369208 CHIC2Q9UKJ5 165 aa13□□□□□ -0.33
SIM1-202ENST00000369208 FANCIQ9NVI1 1328 aa12.99□□□□□ -0.33
SIM1-202ENST00000369208 HMGB1P09429 215 aaKnown RBP12.98□□□□□ -0.33
SIM1-202ENST00000369208 KDM2AQ9Y2K7 1162 aa12.97□□□□□ -0.33
SIM1-202ENST00000369208 NACADO15069 1562 aa12.97□□□□□ -0.33
SIM1-202ENST00000369208 GOLGA6L6A8MZA4 724 aa12.96□□□□□ -0.33
SIM1-202ENST00000369208 ARXQ96QS3 562 aa12.96□□□□□ -0.33
SIM1-202ENST00000369208 MIER1Q8N108 512 aa12.96□□□□□ -0.34
SIM1-202ENST00000369208 TSHZ2Q9NRE2 1034 aa12.95□□□□□ -0.34
SIM1-202ENST00000369208 PDE4CQ08493 712 aa12.95□□□□□ -0.34
SIM1-202ENST00000369208 CASC1Q6TDU7 716 aa12.95□□□□□ -0.34
SIM1-202ENST00000369208 KANK1Q14678 1352 aa12.94□□□□□ -0.34
SIM1-202ENST00000369208 CHMP4BQ9H444 224 aaKnown RBP12.93□□□□□ -0.34
SIM1-202ENST00000369208 BAZ1BQ9UIG0 1483 aaKnown RBP12.93□□□□□ -0.34
SIM1-202ENST00000369208 RRP9O43818 475 aaKnown RBP12.93□□□□□ -0.34
SIM1-202ENST00000369208 EEA1Q15075 1411 aa12.92□□□□□ -0.34
SIM1-202ENST00000369208 ZRSR1Q15695 479 aaKnown RBP12.92□□□□□ -0.34
SIM1-202ENST00000369208 SETQ01105 290 aaPredicted RBP12.92□□□□□ -0.34
SIM1-202ENST00000369208 ZCCHC6Q5VYS8 1495 aaKnown RBP12.92□□□□□ -0.34
SIM1-202ENST00000369208 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
SIM1-202ENST00000369208 GOLGA6L1Q8N7Z2 621 aa12.92□□□□□ -0.34
SIM1-202ENST00000369208 POGKQ9P215 609 aa12.91□□□□□ -0.34
SIM1-202ENST00000369208 NRDCO43847 1150 aa12.91□□□□□ -0.34
SIM1-202ENST00000369208 FAM9BQ8IZU0 186 aa12.91□□□□□ -0.34
SIM1-202ENST00000369208 LMOD2Q6P5Q4 547 aa12.9□□□□□ -0.34
SIM1-202ENST00000369208 CFDP1Q9UEE9 299 aaPredicted RBP12.9□□□□□ -0.34
SIM1-202ENST00000369208 NUDCQ9Y266 331 aa12.9□□□□□ -0.34
SIM1-202ENST00000369208 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
SIM1-202ENST00000369208 KNSTRNQ9Y448 316 aa12.88□□□□□ -0.35
SIM1-202ENST00000369208 MAPK8IP3Q9UPT6 1336 aa12.87□□□□□ -0.35
SIM1-202ENST00000369208 IPO9Q96P70 1041 aaKnown RBP12.87□□□□□ -0.35
SIM1-202ENST00000369208 KIF27Q86VH2 1401 aa12.87□□□□□ -0.35
SIM1-202ENST00000369208 CLIP1P30622 1438 aa12.86□□□□□ -0.35
SIM1-202ENST00000369208 TPM2P07951 284 aa12.85□□□□□ -0.35
SIM1-202ENST00000369208 TMX4Q9H1E5 349 aaPredicted RBP12.85□□□□□ -0.35
SIM1-202ENST00000369208 MRS2Q9HD23 443 aa12.85□□□□□ -0.35
SIM1-202ENST00000369208 TAF7LQ5H9L4 462 aa12.84□□□□□ -0.35
SIM1-202ENST00000369208 KIAA2012Q0VF49 1180 aa12.84□□□□□ -0.35
SIM1-202ENST00000369208 AMER1Q5JTC6 1135 aaPredicted RBP12.83□□□□□ -0.36
SIM1-202ENST00000369208 SALL2Q9Y467 1007 aaPredicted RBP12.83□□□□□ -0.36
SIM1-202ENST00000369208 HOMEZQ8IX15 550 aa12.83□□□□□ -0.36
SIM1-202ENST00000369208 CCDC66A2RUB6 948 aa12.82□□□□□ -0.36
SIM1-202ENST00000369208 GSE1Q14687 1217 aa12.82□□□□□ -0.36
SIM1-202ENST00000369208 NOM1Q5C9Z4 860 aaKnown RBP12.82□□□□□ -0.36
SIM1-202ENST00000369208 MS4A1P11836 297 aa12.82□□□□□ -0.36
SIM1-202ENST00000369208 GOLGA3Q08378 1498 aa12.8□□□□□ -0.36
SIM1-202ENST00000369208 FTSJ3Q8IY81 847 aaKnown RBP12.8□□□□□ -0.36
SIM1-202ENST00000369208 ANO8Q9HCE9 1232 aaPredicted RBP12.79□□□□□ -0.36
SIM1-202ENST00000369208 DDX10Q13206 875 aaKnown RBP12.79□□□□□ -0.36
SIM1-202ENST00000369208 CHMP4AQ9BY43 222 aa12.79□□□□□ -0.36
SIM1-202ENST00000369208 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.78□□□□□ -0.36
SIM1-202ENST00000369208 RRP7BPQ9NSQ0 103 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms