RNA–Protein interactions for RNA: ENST00000368498.6

GOPC-202, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-202ENST00000368498 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.45
GOPC-202ENST00000368498 CEP162Q5TB80 1403 aa17.89■□□□□ 0.45
GOPC-202ENST00000368498 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.88■□□□□ 0.45
GOPC-202ENST00000368498 CLIP1P30622 1438 aa17.88■□□□□ 0.45
GOPC-202ENST00000368498 RRP7BPQ9NSQ0 103 aa17.82■□□□□ 0.44
GOPC-202ENST00000368498 PPM1GO15355 546 aaPredicted RBP17.82■□□□□ 0.44
GOPC-202ENST00000368498 ERICH6BQ5W0A0 696 aa17.81■□□□□ 0.44
GOPC-202ENST00000368498 DDRGK1Q96HY6 314 aa17.81■□□□□ 0.44
GOPC-202ENST00000368498 NAP1L5Q96NT1 182 aaPredicted RBP17.81■□□□□ 0.44
GOPC-202ENST00000368498 TRIM44Q96DX7 344 aaPredicted RBP17.8■□□□□ 0.44
GOPC-202ENST00000368498 WDR43Q15061 677 aaKnown RBP eCLIP17.79■□□□□ 0.44
GOPC-202ENST00000368498 RGS3P49796 1198 aa17.78■□□□□ 0.44
GOPC-202ENST00000368498 KCNH8Q96L42 1107 aa17.74■□□□□ 0.43
GOPC-202ENST00000368498 ARID4BQ4LE39 1312 aaPredicted RBP17.73■□□□□ 0.43
GOPC-202ENST00000368498 BECN1Q14457 450 aa17.72■□□□□ 0.43
GOPC-202ENST00000368498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.71■□□□□ 0.434e-8■■■■□ 21.9
GOPC-202ENST00000368498 CHGAP10645 457 aaKnown RBP17.69■□□□□ 0.42
GOPC-202ENST00000368498 NCLP19338 710 aaKnown RBP17.67■□□□□ 0.42
GOPC-202ENST00000368498 SCRIBQ14160 1630 aa17.66■□□□□ 0.42
GOPC-202ENST00000368498 MTUS2Q5JR59 1369 aa17.65■□□□□ 0.42
GOPC-202ENST00000368498 TPRNQ4KMQ1 711 aa17.63■□□□□ 0.41
GOPC-202ENST00000368498 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
GOPC-202ENST00000368498 RGL3Q3MIN7 710 aa17.61■□□□□ 0.41
GOPC-202ENST00000368498 TNIKQ9UKE5 1360 aa17.6■□□□□ 0.41
GOPC-202ENST00000368498 NEUROD2Q15784 382 aa17.59■□□□□ 0.41
GOPC-202ENST00000368498 SPRYD3Q8NCJ5 442 aa17.57■□□□□ 0.4
GOPC-202ENST00000368498 SENP3Q9H4L4 574 aaPredicted RBP17.57■□□□□ 0.4
GOPC-202ENST00000368498 CCER2I3L3R5 266 aa17.56■□□□□ 0.4
GOPC-202ENST00000368498 DNTTIP2Q5QJE6 756 aaKnown RBP17.56■□□□□ 0.4
GOPC-202ENST00000368498 GOLGA3Q08378 1498 aa17.56■□□□□ 0.4
GOPC-202ENST00000368498 PTMAP06454 111 aaKnown RBP17.53■□□□□ 0.4
GOPC-202ENST00000368498 FRAT1Q92837 279 aaPredicted RBP17.53■□□□□ 0.4
GOPC-202ENST00000368498 GOLGA6L22H0YM25 854 aa17.53■□□□□ 0.4
GOPC-202ENST00000368498 CARD11Q9BXL7 1154 aa17.5■□□□□ 0.39
GOPC-202ENST00000368498 GZF1Q9H116 711 aaPredicted RBP17.49■□□□□ 0.39
GOPC-202ENST00000368498 TSPY4P0CV99 314 aa17.49■□□□□ 0.39
GOPC-202ENST00000368498 TSPY10P0CW01 314 aa17.49■□□□□ 0.39
GOPC-202ENST00000368498 ARID3AQ99856 593 aa17.49■□□□□ 0.39
GOPC-202ENST00000368498 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
GOPC-202ENST00000368498 TNNT2P45379 298 aaPredicted RBP17.48■□□□□ 0.39
GOPC-202ENST00000368498 SLKQ9H2G2 1235 aaPredicted RBP17.48■□□□□ 0.39
GOPC-202ENST00000368498 CC2D1BQ5T0F9 858 aaKnown RBP17.47■□□□□ 0.39
GOPC-202ENST00000368498 KANK4Q5T7N3 995 aaPredicted RBP17.46■□□□□ 0.39
GOPC-202ENST00000368498 PLCB2Q00722 1185 aa17.45■□□□□ 0.38
GOPC-202ENST00000368498 HSPA5P11021 654 aaKnown RBP17.45■□□□□ 0.38
GOPC-202ENST00000368498 AMER1Q5JTC6 1135 aaPredicted RBP17.44■□□□□ 0.38
GOPC-202ENST00000368498 CCNB3Q8WWL7 1395 aa17.43■□□□□ 0.38
GOPC-202ENST00000368498 ZBTB7CA1YPR0 619 aa17.43■□□□□ 0.38
GOPC-202ENST00000368498 SOGA1O94964 1423 aa17.43■□□□□ 0.38
GOPC-202ENST00000368498 MYH16Q9H6N6 1097 aa17.42■□□□□ 0.38
GOPC-202ENST00000368498 EEA1Q15075 1411 aa17.41■□□□□ 0.38
GOPC-202ENST00000368498 KNSTRNQ9Y448 316 aa17.41■□□□□ 0.38
GOPC-202ENST00000368498 PNNQ9H307 717 aaKnown RBP17.4■□□□□ 0.38
GOPC-202ENST00000368498 FTSJ3Q8IY81 847 aaKnown RBP17.4■□□□□ 0.38
GOPC-202ENST00000368498 SLC4A3P48751 1232 aa17.39■□□□□ 0.38
GOPC-202ENST00000368498 FOXD1Q16676 465 aa17.37■□□□□ 0.37
GOPC-202ENST00000368498 HSP90AB1P08238 724 aaKnown RBP17.35■□□□□ 0.37
GOPC-202ENST00000368498 WRNQ14191 1432 aaPredicted RBP eCLIP17.35■□□□□ 0.37
GOPC-202ENST00000368498 L1TD1Q5T7N2 865 aaKnown RBP17.35■□□□□ 0.37
GOPC-202ENST00000368498 RCAN3Q9UKA8 241 aa17.34■□□□□ 0.37
GOPC-202ENST00000368498 TCERG1O14776 1098 aaKnown RBP17.33■□□□□ 0.36
GOPC-202ENST00000368498 PPP1R15AO75807 674 aaPredicted RBP17.32■□□□□ 0.36
GOPC-202ENST00000368498 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
GOPC-202ENST00000368498 STAG3Q9UJ98 1225 aa17.31■□□□□ 0.36
GOPC-202ENST00000368498 TIMELESSQ9UNS1 1208 aa17.31■□□□□ 0.36
GOPC-202ENST00000368498 BAZ1BQ9UIG0 1483 aaKnown RBP17.3■□□□□ 0.36
GOPC-202ENST00000368498 MSNP26038 577 aaKnown RBP17.3■□□□□ 0.36
GOPC-202ENST00000368498 ANO8Q9HCE9 1232 aaPredicted RBP17.29■□□□□ 0.36
GOPC-202ENST00000368498 RAB3GAP2Q9H2M9 1393 aa17.29■□□□□ 0.36
GOPC-202ENST00000368498 VSIG10Q8N0Z9 540 aa17.28■□□□□ 0.36
GOPC-202ENST00000368498 FANCIQ9NVI1 1328 aa17.27■□□□□ 0.36
GOPC-202ENST00000368498 HSCBQ8IWL3 235 aa17.27■□□□□ 0.35
GOPC-202ENST00000368498 DCAF11Q8TEB1 546 aa17.25■□□□□ 0.35
GOPC-202ENST00000368498 NUDCQ9Y266 331 aa17.25■□□□□ 0.35
GOPC-202ENST00000368498 SETD5Q9C0A6 1442 aa17.24■□□□□ 0.35
GOPC-202ENST00000368498 CDK11BP21127 795 aaKnown RBP17.23■□□□□ 0.35
GOPC-202ENST00000368498 CFDP1Q9UEE9 299 aaPredicted RBP17.23■□□□□ 0.35
GOPC-202ENST00000368498 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
GOPC-202ENST00000368498 PDE4AP27815 886 aa17.22■□□□□ 0.35
GOPC-202ENST00000368498 GSE1Q14687 1217 aa17.21■□□□□ 0.35
GOPC-202ENST00000368498 VPS8Q8N3P4 1428 aa17.21■□□□□ 0.35
GOPC-202ENST00000368498 PLEKHG5O94827 1062 aa17.21■□□□□ 0.35
GOPC-202ENST00000368498 CFAP53Q96M91 514 aa17.21■□□□□ 0.34
GOPC-202ENST00000368498 HSP90AA2PQ14568 343 aaPredicted RBP17.19■□□□□ 0.34
GOPC-202ENST00000368498 GOLGA6L3A6NEY3 463 aa17.19■□□□□ 0.34
GOPC-202ENST00000368498 PLIN1O60240 522 aa17.19■□□□□ 0.34
GOPC-202ENST00000368498 U2SURPO15042 1029 aaKnown RBP17.17■□□□□ 0.34
GOPC-202ENST00000368498 TAOK2Q9UL54 1235 aa17.17■□□□□ 0.34
GOPC-202ENST00000368498 IL27Q8NEV9 243 aa17.17■□□□□ 0.34
GOPC-202ENST00000368498 EXOC6Q8TAG9 804 aa17.17■□□□□ 0.34
GOPC-202ENST00000368498 DHX57Q6P158 1386 aaKnown RBP17.16■□□□□ 0.34
GOPC-202ENST00000368498 USP35Q9P2H5 1018 aa17.15■□□□□ 0.34
GOPC-202ENST00000368498 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
GOPC-202ENST00000368498 CDCA8Q53HL2 280 aa17.14■□□□□ 0.33
GOPC-202ENST00000368498 CASC1Q6TDU7 716 aa17.14■□□□□ 0.33
GOPC-202ENST00000368498 CECR2Q9BXF3 1484 aa17.14■□□□□ 0.33
GOPC-202ENST00000368498 L3MBTL2Q969R5 705 aa17.14■□□□□ 0.33
GOPC-202ENST00000368498 CCDC88BA6NC98 1476 aa17.14■□□□□ 0.33
GOPC-202ENST00000368498 CLUAP1Q96AJ1 413 aa17.13■□□□□ 0.33
GOPC-202ENST00000368498 MFAP1P55081 439 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms