RNA–Protein interactions for RNA: ENST00000368408.3

EFNA3-201, Transcript of ephrin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3-201ENST00000368408 GRIN2BQ13224 1484 aa40.13■■■■■ 4.01
EFNA3-201ENST00000368408 AQRO60306 1485 aaKnown RBP eCLIP40.12■■■■■ 4.012e-6■■■■□ 24.3
EFNA3-201ENST00000368408 FHAD1B1AJZ9 1412 aa40.12■■■■■ 4.01
EFNA3-201ENST00000368408 ADAMTS12P58397 1594 aa40.09■■■■■ 4.01
EFNA3-201ENST00000368408 MAP3K1Q13233 1512 aa40.07■■■■■ 4
EFNA3-201ENST00000368408 ZEB1P37275 1124 aaPredicted RBP40.02■■■■■ 4
EFNA3-201ENST00000368408 ZNF608Q9ULD9 1512 aaPredicted RBP40.02■■■■■ 4
EFNA3-201ENST00000368408 SAMD9Q5K651 1589 aa39.95■■■■□ 3.99
EFNA3-201ENST00000368408 EIF4G3O43432 1585 aaKnown RBP39.91■■■■□ 3.98
EFNA3-201ENST00000368408 KANK4Q5T7N3 995 aaPredicted RBP39.89■■■■□ 3.98
EFNA3-201ENST00000368408 TIAM1Q13009 1591 aa39.88■■■■□ 3.98
EFNA3-201ENST00000368408 FHOD3Q2V2M9 1422 aa39.87■■■■□ 3.97
EFNA3-201ENST00000368408 PCF11O94913 1555 aaKnown RBP39.84■■■■□ 3.97
EFNA3-201ENST00000368408 FYCO1Q9BQS8 1478 aa39.83■■■■□ 3.97
EFNA3-201ENST00000368408 CASKIN1Q8WXD9 1431 aa39.81■■■■□ 3.96
EFNA3-201ENST00000368408 FMN1Q68DA7 1419 aa39.8■■■■□ 3.96
EFNA3-201ENST00000368408 CFAP43Q8NDM7 1665 aa39.78■■■■□ 3.96
EFNA3-201ENST00000368408 SNAPC4Q5SXM2 1469 aa39.76■■■■□ 3.96
EFNA3-201ENST00000368408 P3H3Q8IVL6 736 aa39.76■■■■□ 3.96
EFNA3-201ENST00000368408 IQGAP2Q13576 1575 aa39.74■■■■□ 3.95
EFNA3-201ENST00000368408 MAGI1Q96QZ7 1491 aaPredicted RBP39.74■■■■□ 3.95
EFNA3-201ENST00000368408 RRBP1Q9P2E9 1410 aaKnown RBP39.71■■■■□ 3.95
EFNA3-201ENST00000368408 LRRC9Q6ZRR7 1453 aa39.69■■■■□ 3.95
EFNA3-201ENST00000368408 GRIN2AQ12879 1464 aa39.65■■■■□ 3.94
EFNA3-201ENST00000368408 UGGT2Q9NYU1 1516 aa39.62■■■■□ 3.93
EFNA3-201ENST00000368408 KIAA0586Q9BVV6 1533 aa39.61■■■■□ 3.93
EFNA3-201ENST00000368408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.59■■■■□ 3.93
EFNA3-201ENST00000368408 SYNJ2O15056 1496 aa39.58■■■■□ 3.93
EFNA3-201ENST00000368408 CCER1Q8TC90 406 aaPredicted RBP39.53■■■■□ 3.92
EFNA3-201ENST00000368408 HNRNPUL2Q1KMD3 747 aaKnown RBP39.49■■■■□ 3.91
EFNA3-201ENST00000368408 CCNB3Q8WWL7 1395 aa39.48■■■■□ 3.91
EFNA3-201ENST00000368408 LRRIQ1Q96JM4 1722 aa39.38■■■■□ 3.9
EFNA3-201ENST00000368408 CEP170Q5SW79 1584 aa39.37■■■■□ 3.89
EFNA3-201ENST00000368408 NUP160Q12769 1436 aa39.37■■■■□ 3.89
EFNA3-201ENST00000368408 CHMP7Q8WUX9 453 aaPredicted RBP39.37■■■■□ 3.89
EFNA3-201ENST00000368408 ATP1B4Q9UN42 357 aaPredicted RBP39.37■■■■□ 3.89
EFNA3-201ENST00000368408 DISP1Q96F81 1524 aa39.35■■■■□ 3.89
EFNA3-201ENST00000368408 KIAA0556O60303 1618 aa39.34■■■■□ 3.89
EFNA3-201ENST00000368408 PHLDB1Q86UU1 1377 aa39.34■■■■□ 3.89
EFNA3-201ENST00000368408 CCDC18Q5T9S5 1454 aa39.32■■■■□ 3.88
EFNA3-201ENST00000368408 HECW1Q76N89 1606 aa39.31■■■■□ 3.88
EFNA3-201ENST00000368408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.2■■■■□ 3.87
EFNA3-201ENST00000368408 EHBP1L1Q8N3D4 1523 aa39.2■■■■□ 3.87
EFNA3-201ENST00000368408 MTUS2Q5JR59 1369 aa39.19■■■■□ 3.86
EFNA3-201ENST00000368408 EPRSP07814 1512 aaKnown RBP39.15■■■■□ 3.86
EFNA3-201ENST00000368408 FBLN2P98095 1184 aa39.1■■■■□ 3.85
EFNA3-201ENST00000368408 SUPT6HQ7KZ85 1726 aaKnown RBP39.1■■■■□ 3.85
EFNA3-201ENST00000368408 ARHGEF11O15085 1522 aa39.08■■■■□ 3.85
EFNA3-201ENST00000368408 NCOA2Q15596 1464 aa39.06■■■■□ 3.84
EFNA3-201ENST00000368408 MAGI3Q5TCQ9 1506 aa39.06■■■■□ 3.84
EFNA3-201ENST00000368408 CARMIL2Q6F5E8 1435 aa39.04■■■■□ 3.84
EFNA3-201ENST00000368408 FGD6Q6ZV73 1430 aa39.04■■■■□ 3.84
EFNA3-201ENST00000368408 RAPGEF6Q8TEU7 1601 aa39.03■■■■□ 3.84
EFNA3-201ENST00000368408 JPH4Q96JJ6 628 aa39.03■■■■□ 3.84
EFNA3-201ENST00000368408 CLSPNQ9HAW4 1339 aa38.98■■■■□ 3.83
EFNA3-201ENST00000368408 MYOM3Q5VTT5 1437 aa38.97■■■■□ 3.83
EFNA3-201ENST00000368408 NUP153P49790 1475 aaKnown RBP38.96■■■■□ 3.83
EFNA3-201ENST00000368408 CDK13Q14004 1512 aaKnown RBP38.96■■■■□ 3.83
EFNA3-201ENST00000368408 DHX57Q6P158 1386 aaKnown RBP38.93■■■■□ 3.82
EFNA3-201ENST00000368408 FAM50AQ14320 339 aaKnown RBP38.92■■■■□ 3.82
EFNA3-201ENST00000368408 CHD1O14646 1710 aa38.92■■■■□ 3.82
EFNA3-201ENST00000368408 ITGAEP38570 1179 aa38.86■■■■□ 3.81
EFNA3-201ENST00000368408 SETD5Q9C0A6 1442 aa38.84■■■■□ 3.81
EFNA3-201ENST00000368408 RAB3GAP2Q9H2M9 1393 aa38.8■■■■□ 3.8
EFNA3-201ENST00000368408 TCOF1Q13428 1488 aaKnown RBP38.79■■■■□ 3.8
EFNA3-201ENST00000368408 PLB1Q6P1J6 1458 aa38.78■■■■□ 3.8
EFNA3-201ENST00000368408 OSCARQ8IYS5 282 aa38.77■■■■□ 3.8
EFNA3-201ENST00000368408 DNAJC5Q9H3Z4 198 aa38.77■■■■□ 3.8
EFNA3-201ENST00000368408 PTPN23Q9H3S7 1636 aa38.77■■■■□ 3.8
EFNA3-201ENST00000368408 ABCA8O94911 1581 aa38.77■■■■□ 3.8
EFNA3-201ENST00000368408 SHROOM2Q13796 1616 aa38.76■■■■□ 3.8
EFNA3-201ENST00000368408 MIA2Q96PC5 1412 aa38.75■■■■□ 3.79
EFNA3-201ENST00000368408 CDK11AQ9UQ88 783 aaPredicted RBP38.72■■■■□ 3.79
EFNA3-201ENST00000368408 PRG4Q92954 1404 aaPredicted RBP38.72■■■■□ 3.79
EFNA3-201ENST00000368408 TROQ12816 1431 aaPredicted RBP38.65■■■■□ 3.78
EFNA3-201ENST00000368408 PTPRKQ15262 1439 aa38.63■■■■□ 3.77
EFNA3-201ENST00000368408 ARID3CA6NKF2 412 aa38.61■■■■□ 3.77
EFNA3-201ENST00000368408 ADCY10Q96PN6 1610 aa38.61■■■■□ 3.77
EFNA3-201ENST00000368408 HFM1A2PYH4 1435 aa38.58■■■■□ 3.77
EFNA3-201ENST00000368408 PTPRGP23470 1445 aa38.56■■■■□ 3.76
EFNA3-201ENST00000368408 CLASP1Q7Z460 1538 aa38.54■■■■□ 3.76
EFNA3-201ENST00000368408 ATP10BO94823 1461 aa38.51■■■■□ 3.76
EFNA3-201ENST00000368408 MAPKBP1O60336 1514 aa38.5■■■■□ 3.75
EFNA3-201ENST00000368408 AKNAQ7Z591 1439 aa38.48■■■■□ 3.75
EFNA3-201ENST00000368408 NAIPQ13075 1403 aa38.45■■■■□ 3.75
EFNA3-201ENST00000368408 ITSN2Q9NZM3 1697 aa38.42■■■■□ 3.74
EFNA3-201ENST00000368408 KIF14Q15058 1648 aa38.39■■■■□ 3.74
EFNA3-201ENST00000368408 UACAQ9BZF9 1416 aa38.38■■■■□ 3.73
EFNA3-201ENST00000368408 GPATCH8Q9UKJ3 1502 aaKnown RBP38.36■■■■□ 3.73
EFNA3-201ENST00000368408 GCC2Q8IWJ2 1684 aa38.36■■■■□ 3.73
EFNA3-201ENST00000368408 PLEKHD1A6NEE1 506 aa38.35■■■■□ 3.73
EFNA3-201ENST00000368408 DNMT1P26358 1616 aaKnown RBP38.34■■■■□ 3.73
EFNA3-201ENST00000368408 ERCC6L2Q5T890 1561 aa38.34■■■■□ 3.73
EFNA3-201ENST00000368408 ABCC10Q5T3U5 1492 aa38.32■■■■□ 3.72
EFNA3-201ENST00000368408 DAPK1P53355 1430 aa38.29■■■■□ 3.72
EFNA3-201ENST00000368408 ROCK1Q13464 1354 aa38.28■■■■□ 3.72
EFNA3-201ENST00000368408 ZNF316A6NFI3 1004 aaPredicted RBP38.27■■■■□ 3.72
EFNA3-201ENST00000368408 ABCC2Q92887 1545 aa38.27■■■■□ 3.72
EFNA3-201ENST00000368408 ABCC5O15440 1437 aa38.25■■■■□ 3.71
EFNA3-201ENST00000368408 CAMSAP2Q08AD1 1489 aa38.23■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms