RNA–Protein interactions for RNA: ENST00000367911.3

CCDC190-202, Transcript of coiled-coil domain containing 190, humanhuman

APPRIS P2 TSL 3 BASIC

Gene CCDC190, Length 1,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190-202ENST00000367911 BICRAQ9NZM4 1560 aa11.82□□□□□ -0.52
CCDC190-202ENST00000367911 SHROOM4Q9ULL8 1493 aa11.79□□□□□ -0.52
CCDC190-202ENST00000367911 PELP1Q8IZL8 1130 aaKnown RBP11.79□□□□□ -0.52
CCDC190-202ENST00000367911 PHF12Q96QT6 1004 aa11.76□□□□□ -0.53
CCDC190-202ENST00000367911 SCRIBQ14160 1630 aa11.7□□□□□ -0.54
CCDC190-202ENST00000367911 POTEJP0CG39 1038 aa11.69□□□□□ -0.54
CCDC190-202ENST00000367911 LCE2DQ5TA82 110 aaPredicted RBP11.65□□□□□ -0.55
CCDC190-202ENST00000367911 MNX1P50219 401 aaPredicted RBP11.59□□□□□ -0.55
CCDC190-202ENST00000367911 CECR2Q9BXF3 1484 aa11.59□□□□□ -0.55
CCDC190-202ENST00000367911 CC2D2AQ9P2K1 1620 aa11.58□□□□□ -0.56
CCDC190-202ENST00000367911 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
CCDC190-202ENST00000367911 EIF4G1Q04637 1599 aaKnown RBP11.58□□□□□ -0.56
CCDC190-202ENST00000367911 MS4A3Q96HJ5 214 aa11.56□□□□□ -0.56
CCDC190-202ENST00000367911 METRNQ9UJH8 293 aa11.56□□□□□ -0.56
CCDC190-202ENST00000367911 PAK3O75914 559 aaPredicted RBP11.55□□□□□ -0.56
CCDC190-202ENST00000367911 ATMINO43313 823 aaPredicted RBP11.54□□□□□ -0.56
CCDC190-202ENST00000367911 ASTLQ6HA08 431 aaPredicted RBP11.54□□□□□ -0.56
CCDC190-202ENST00000367911 FAM163AQ96GL9 167 aaPredicted RBP11.53□□□□□ -0.56
CCDC190-202ENST00000367911 SPDYE4A6NLX3 237 aa11.47□□□□□ -0.57
CCDC190-202ENST00000367911 C7P10643 843 aa11.47□□□□□ -0.57
CCDC190-202ENST00000367911 CSRNP3Q8WYN3 585 aa11.47□□□□□ -0.57
CCDC190-202ENST00000367911 SLC39A7Q92504 469 aa11.47□□□□□ -0.57
CCDC190-202ENST00000367911 NPM1P06748 294 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCDC190-202ENST00000367911 POTEFA5A3E0 1075 aa11.44□□□□□ -0.58
CCDC190-202ENST00000367911 ATN1P54259 1190 aaPredicted RBP11.44□□□□□ -0.58
CCDC190-202ENST00000367911 MAMSTRQ6ZN01 415 aa11.41□□□□□ -0.58
CCDC190-202ENST00000367911 TSPYL2Q9H2G4 693 aaPredicted RBP11.4□□□□□ -0.59
CCDC190-202ENST00000367911 TRPC6Q9Y210 931 aa11.4□□□□□ -0.59
CCDC190-202ENST00000367911 CDAN1Q8IWY9 1227 aa11.39□□□□□ -0.59
CCDC190-202ENST00000367911 CCDC61Q9Y6R9 512 aa11.33□□□□□ -0.6
CCDC190-202ENST00000367911 SCUBE2Q9NQ36 999 aa11.32□□□□□ -0.6
CCDC190-202ENST00000367911 BMP2KQ9NSY1 1161 aaPredicted RBP11.32□□□□□ -0.6
CCDC190-202ENST00000367911 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
CCDC190-202ENST00000367911 COLQQ9Y215 455 aaPredicted RBP11.28□□□□□ -0.6
CCDC190-202ENST00000367911 NCAPD3P42695 1498 aa11.25□□□□□ -0.61
CCDC190-202ENST00000367911 MAP3K13O43283 966 aa11.24□□□□□ -0.61
CCDC190-202ENST00000367911 MMRN1Q13201 1228 aa11.24□□□□□ -0.61
CCDC190-202ENST00000367911 SMARCA2P51531 1590 aa11.2□□□□□ -0.62
CCDC190-202ENST00000367911 ATAD2BQ9ULI0 1458 aa11.2□□□□□ -0.62
CCDC190-202ENST00000367911 SMARCA4P51532 1647 aa11.17□□□□□ -0.62
CCDC190-202ENST00000367911 TTLL13PA6NNM8 815 aa11.16□□□□□ -0.62
CCDC190-202ENST00000367911 TIE1P35590 1138 aa11.16□□□□□ -0.62
CCDC190-202ENST00000367911 BAZ1AQ9NRL2 1556 aaPredicted RBP11.16□□□□□ -0.62
CCDC190-202ENST00000367911 HMGXB3Q12766 1538 aa11.16□□□□□ -0.62
CCDC190-202ENST00000367911 SPNS2Q8IVW8 549 aa11.16□□□□□ -0.62
CCDC190-202ENST00000367911 RASEFQ8IZ41 740 aa11.16□□□□□ -0.62
CCDC190-202ENST00000367911 ERCC6Q03468 1493 aa11.14□□□□□ -0.63
CCDC190-202ENST00000367911 SEC24BO95487 1268 aa11.13□□□□□ -0.63
CCDC190-202ENST00000367911 ST18O60284 1047 aa11.12□□□□□ -0.63
CCDC190-202ENST00000367911 CUX2O14529 1486 aa11.11□□□□□ -0.63
CCDC190-202ENST00000367911 BAZ1BQ9UIG0 1483 aaKnown RBP11.11□□□□□ -0.63
CCDC190-202ENST00000367911 PROM2Q8N271 834 aa11.1□□□□□ -0.63
CCDC190-202ENST00000367911 TRIM35Q9UPQ4 493 aa11.09□□□□□ -0.63
CCDC190-202ENST00000367911 PEG3Q9GZU2 1588 aa11.07□□□□□ -0.64
CCDC190-202ENST00000367911 SLAIN1Q8ND83 568 aa11.06□□□□□ -0.64
CCDC190-202ENST00000367911 DNAJC5Q9H3Z4 198 aa11.06□□□□□ -0.64
CCDC190-202ENST00000367911 MIER1Q8N108 512 aa11.03□□□□□ -0.64
CCDC190-202ENST00000367911 MROH2BQ7Z745 1585 aa11.02□□□□□ -0.65
CCDC190-202ENST00000367911 EHMT2Q96KQ7 1210 aa11.01□□□□□ -0.65
CCDC190-202ENST00000367911 NESP48681 1621 aa11□□□□□ -0.65
CCDC190-202ENST00000367911 LAMC3Q9Y6N6 1575 aa10.99□□□□□ -0.65
CCDC190-202ENST00000367911 IER5LQ5T953 404 aa10.99□□□□□ -0.65
CCDC190-202ENST00000367911 PCDHB13Q9Y5F0 798 aa10.99□□□□□ -0.65
CCDC190-202ENST00000367911 IFNL1Q8IU54 200 aa10.97□□□□□ -0.65
CCDC190-202ENST00000367911 PDS5BQ9NTI5 1447 aa10.97□□□□□ -0.65
CCDC190-202ENST00000367911 TMEM106CQ9BVX2 250 aa10.92□□□□□ -0.66
CCDC190-202ENST00000367911 CADPSQ9ULU8 1353 aa10.92□□□□□ -0.66
CCDC190-202ENST00000367911 MARVELD3Q96A59 401 aa10.91□□□□□ -0.66
CCDC190-202ENST00000367911 SGIP1Q9BQI5 828 aa10.91□□□□□ -0.66
CCDC190-202ENST00000367911 NUBP1P53384 320 aa10.9□□□□□ -0.66
CCDC190-202ENST00000367911 IRX5P78411 483 aaPredicted RBP10.9□□□□□ -0.66
CCDC190-202ENST00000367911 THOC2Q8NI27 1593 aaKnown RBP10.89□□□□□ -0.67
CCDC190-202ENST00000367911 PLCG2P16885 1265 aa10.88□□□□□ -0.67
CCDC190-202ENST00000367911 WIZO95785 1651 aa10.87□□□□□ -0.67
CCDC190-202ENST00000367911 PLEKHG5O94827 1062 aa10.87□□□□□ -0.67
CCDC190-202ENST00000367911 KIF21AQ7Z4S6 1674 aa10.83□□□□□ -0.67
CCDC190-202ENST00000367911 MRC2Q9UBG0 1479 aa10.83□□□□□ -0.68
CCDC190-202ENST00000367911 RSF1Q96T23 1441 aaPredicted RBP10.83□□□□□ -0.68
CCDC190-202ENST00000367911 PLCD3Q8N3E9 789 aa10.82□□□□□ -0.68
CCDC190-202ENST00000367911 CEP164Q9UPV0 1460 aa10.8□□□□□ -0.68
CCDC190-202ENST00000367911 POTEB3A0JP26 581 aa10.8□□□□□ -0.68
CCDC190-202ENST00000367911 POTEBQ6S5H4 581 aa10.8□□□□□ -0.68
CCDC190-202ENST00000367911 TMEM121BQ9BXQ6 578 aaPredicted RBP10.8□□□□□ -0.68
CCDC190-202ENST00000367911 OCEL1Q9H607 264 aa10.79□□□□□ -0.68
CCDC190-202ENST00000367911 TOP2AP11388 1531 aaKnown RBP10.79□□□□□ -0.68
CCDC190-202ENST00000367911 WDR62O43379 1518 aa10.78□□□□□ -0.68
CCDC190-202ENST00000367911 CFTRP13569 1480 aa10.78□□□□□ -0.68
CCDC190-202ENST00000367911 FANCD2Q9BXW9 1451 aa10.78□□□□□ -0.68
CCDC190-202ENST00000367911 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.76□□□□□ -0.69
CCDC190-202ENST00000367911 KRTAP3-3Q9BYR6 98 aa10.75□□□□□ -0.69
CCDC190-202ENST00000367911 KRTAP3-2Q9BYR7 98 aa10.75□□□□□ -0.69
CCDC190-202ENST00000367911 SNPHO15079 494 aa10.73□□□□□ -0.69
CCDC190-202ENST00000367911 PCDHB8Q9UN66 801 aa10.73□□□□□ -0.69
CCDC190-202ENST00000367911 SUPT5HO00267 1087 aaKnown RBP10.72□□□□□ -0.69
CCDC190-202ENST00000367911 PYGBP11216 843 aa10.72□□□□□ -0.69
CCDC190-202ENST00000367911 FAM212AQ96EL1 285 aa10.7□□□□□ -0.7
CCDC190-202ENST00000367911 EMP3P54852 163 aa10.68□□□□□ -0.7
CCDC190-202ENST00000367911 PDCD7Q8N8D1 485 aaKnown RBP10.67□□□□□ -0.7
CCDC190-202ENST00000367911 HS3ST6Q96QI5 342 aa10.67□□□□□ -0.7
CCDC190-202ENST00000367911 FAM205CA6NFA0 338 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms