RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 HIRIP3Q9BW71 556 aaPredicted RBP22.3■■□□□ 1.16
SCAF8-201ENST00000367178 CFDP1Q9UEE9 299 aaPredicted RBP22.3■■□□□ 1.16
SCAF8-201ENST00000367178 EIF4G2P78344 907 aaKnown RBP eCLIP22.29■■□□□ 1.16
SCAF8-201ENST00000367178 MRS2Q9HD23 443 aa22.29■■□□□ 1.16
SCAF8-201ENST00000367178 ANP32AP39687 249 aaKnown RBP22.28■■□□□ 1.16
SCAF8-201ENST00000367178 ERCC6Q03468 1493 aa22.24■■□□□ 1.15
SCAF8-201ENST00000367178 WDR43Q15061 677 aaKnown RBP eCLIP22.24■■□□□ 1.153e-6■■■■□ 20.8
SCAF8-201ENST00000367178 NPM2Q86SE8 214 aaKnown RBP22.21■■□□□ 1.15
SCAF8-201ENST00000367178 RGL3Q3MIN7 710 aa22.19■■□□□ 1.14
SCAF8-201ENST00000367178 MIER1Q8N108 512 aa22.18■■□□□ 1.14
SCAF8-201ENST00000367178 PPP1R15AO75807 674 aaPredicted RBP22.14■■□□□ 1.14
SCAF8-201ENST00000367178 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
SCAF8-201ENST00000367178 CARMIL1Q5VZK9 1371 aa22.13■■□□□ 1.13
SCAF8-201ENST00000367178 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.13■■□□□ 1.13
SCAF8-201ENST00000367178 CUX2O14529 1486 aa22.12■■□□□ 1.13
SCAF8-201ENST00000367178 CCDC136Q96JN2 1154 aa22.1■■□□□ 1.13
SCAF8-201ENST00000367178 SOGA1O94964 1423 aa22.09■■□□□ 1.13
SCAF8-201ENST00000367178 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
SCAF8-201ENST00000367178 FHAD1B1AJZ9 1412 aa22.07■■□□□ 1.12
SCAF8-201ENST00000367178 UPF2Q9HAU5 1272 aaKnown RBP22.06■■□□□ 1.12
SCAF8-201ENST00000367178 CCDC88BA6NC98 1476 aa22.02■■□□□ 1.12
SCAF8-201ENST00000367178 ARID4BQ4LE39 1312 aaPredicted RBP22.01■■□□□ 1.11
SCAF8-201ENST00000367178 SCAF1Q9H7N4 1312 aaKnown RBP22.01■■□□□ 1.11
SCAF8-201ENST00000367178 HSP90AA1P07900 732 aaKnown RBP22.01■■□□□ 1.11
SCAF8-201ENST00000367178 CCNB3Q8WWL7 1395 aa22.01■■□□□ 1.11
SCAF8-201ENST00000367178 CARD11Q9BXL7 1154 aa22■■□□□ 1.11
SCAF8-201ENST00000367178 CDCA8Q53HL2 280 aa21.98■■□□□ 1.11
SCAF8-201ENST00000367178 SIN3AQ96ST3 1273 aa21.98■■□□□ 1.11
SCAF8-201ENST00000367178 EIF4G1Q04637 1599 aaKnown RBP21.97■■□□□ 1.11
SCAF8-201ENST00000367178 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
SCAF8-201ENST00000367178 C14orf37Q86TY3 774 aa21.94■■□□□ 1.1
SCAF8-201ENST00000367178 IRX6P78412 446 aaPredicted RBP21.93■■□□□ 1.1
SCAF8-201ENST00000367178 KNSTRNQ9Y448 316 aa21.92■■□□□ 1.1
SCAF8-201ENST00000367178 PLEKHG5O94827 1062 aa21.91■■□□□ 1.1
SCAF8-201ENST00000367178 ZBTB7CA1YPR0 619 aa21.89■■□□□ 1.1
SCAF8-201ENST00000367178 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.09
SCAF8-201ENST00000367178 CFAP53Q96M91 514 aa21.88■■□□□ 1.09
SCAF8-201ENST00000367178 ABCC8Q09428 1581 aa21.88■■□□□ 1.09
SCAF8-201ENST00000367178 VPS8Q8N3P4 1428 aa21.85■■□□□ 1.09
SCAF8-201ENST00000367178 TDRD9Q8NDG6 1382 aaKnown RBP21.84■■□□□ 1.09
SCAF8-201ENST00000367178 MYH16Q9H6N6 1097 aa21.82■■□□□ 1.08
SCAF8-201ENST00000367178 A0A0G2JS52 829 aa21.81■■□□□ 1.08
SCAF8-201ENST00000367178 SENP3-EIF4A1A0A087X0R7 540 aa21.8■■□□□ 1.08
SCAF8-201ENST00000367178 POGKQ9P215 609 aa21.79■■□□□ 1.08
SCAF8-201ENST00000367178 PPM1GO15355 546 aaPredicted RBP21.79■■□□□ 1.08
SCAF8-201ENST00000367178 KANK4Q5T7N3 995 aaPredicted RBP21.77■■□□□ 1.08
SCAF8-201ENST00000367178 CARMIL2Q6F5E8 1435 aa21.77■■□□□ 1.07
SCAF8-201ENST00000367178 DCAF11Q8TEB1 546 aa21.76■■□□□ 1.07
SCAF8-201ENST00000367178 ANP32BQ92688 251 aaKnown RBP21.76■■□□□ 1.07
SCAF8-201ENST00000367178 ARHGAP35Q9NRY4 1499 aa21.74■■□□□ 1.07
SCAF8-201ENST00000367178 TIMELESSQ9UNS1 1208 aa21.74■■□□□ 1.07
SCAF8-201ENST00000367178 KANK1Q14678 1352 aa21.73■■□□□ 1.07
SCAF8-201ENST00000367178 TOP2AP11388 1531 aaKnown RBP21.73■■□□□ 1.07
SCAF8-201ENST00000367178 CADPSQ9ULU8 1353 aa21.72■■□□□ 1.07
SCAF8-201ENST00000367178 SETD5Q9C0A6 1442 aa21.71■■□□□ 1.07
SCAF8-201ENST00000367178 HAP1P54257 671 aaPredicted RBP21.69■■□□□ 1.06
SCAF8-201ENST00000367178 FMN1Q68DA7 1419 aa21.69■■□□□ 1.06
SCAF8-201ENST00000367178 NEUROD2Q15784 382 aa21.69■■□□□ 1.06
SCAF8-201ENST00000367178 WIZO95785 1651 aa21.69■■□□□ 1.06
SCAF8-201ENST00000367178 NUDCQ9Y266 331 aa21.68■■□□□ 1.06
SCAF8-201ENST00000367178 MAPK8IP3Q9UPT6 1336 aa21.67■■□□□ 1.06
SCAF8-201ENST00000367178 TMF1P82094 1093 aa21.66■■□□□ 1.06
SCAF8-201ENST00000367178 MLECQ14165 292 aa21.66■■□□□ 1.06
SCAF8-201ENST00000367178 TNNT2P45379 298 aaPredicted RBP21.65■■□□□ 1.06
SCAF8-201ENST00000367178 SUPT16HQ9Y5B9 1047 aaKnown RBP21.65■■□□□ 1.06
SCAF8-201ENST00000367178 PKD2Q13563 968 aa21.65■■□□□ 1.06
SCAF8-201ENST00000367178 CC2D1BQ5T0F9 858 aaKnown RBP21.64■■□□□ 1.06
SCAF8-201ENST00000367178 GGT6Q6P531 493 aa21.63■■□□□ 1.05
SCAF8-201ENST00000367178 LMOD2Q6P5Q4 547 aa21.62■■□□□ 1.05
SCAF8-201ENST00000367178 TRHP20396 242 aaPredicted RBP21.62■■□□□ 1.05
SCAF8-201ENST00000367178 ATAD2BQ9ULI0 1458 aa21.61■■□□□ 1.05
SCAF8-201ENST00000367178 EFCAB2Q5VUJ9 269 aa21.6■■□□□ 1.05
SCAF8-201ENST00000367178 NBR1Q14596 966 aa21.59■■□□□ 1.05
SCAF8-201ENST00000367178 EIF5BO60841 1220 aaKnown RBP21.59■■□□□ 1.05
SCAF8-201ENST00000367178 FTSJ3Q8IY81 847 aaKnown RBP21.58■■□□□ 1.05
SCAF8-201ENST00000367178 FOXD1Q16676 465 aa21.58■■□□□ 1.04
SCAF8-201ENST00000367178 LAS1LQ9Y4W2 734 aaKnown RBP21.58■■□□□ 1.04
SCAF8-201ENST00000367178 HDGFP51858 240 aaKnown RBP21.58■■□□□ 1.04
SCAF8-201ENST00000367178 RAPGEF2Q9Y4G8 1499 aa21.56■■□□□ 1.04
SCAF8-201ENST00000367178 U2SURPO15042 1029 aaKnown RBP21.56■■□□□ 1.04
SCAF8-201ENST00000367178 RAB3GAP2Q9H2M9 1393 aa21.54■■□□□ 1.04
SCAF8-201ENST00000367178 HSPA5P11021 654 aaKnown RBP21.53■■□□□ 1.04
SCAF8-201ENST00000367178 SRPK2P78362 688 aaKnown RBP21.53■■□□□ 1.04
SCAF8-201ENST00000367178 MPHOSPH9Q99550 1183 aa21.53■■□□□ 1.04
SCAF8-201ENST00000367178 NUP155O75694 1391 aa21.52■■□□□ 1.04
SCAF8-201ENST00000367178 FHOD3Q2V2M9 1422 aa21.52■■□□□ 1.04
SCAF8-201ENST00000367178 ANKRD30AQ9BXX3 1397 aa21.51■■□□□ 1.03
SCAF8-201ENST00000367178 SAFB2Q14151 953 aaKnown RBP eCLIP21.51■■□□□ 1.03
SCAF8-201ENST00000367178 ARXQ96QS3 562 aa21.5■■□□□ 1.03
SCAF8-201ENST00000367178 BECN1Q14457 450 aa21.49■■□□□ 1.03
SCAF8-201ENST00000367178 FRAT1Q92837 279 aaPredicted RBP21.49■■□□□ 1.03
SCAF8-201ENST00000367178 DDRGK1Q96HY6 314 aa21.47■■□□□ 1.03
SCAF8-201ENST00000367178 JPH4Q96JJ6 628 aa21.47■■□□□ 1.03
SCAF8-201ENST00000367178 SMARCA4P51532 1647 aa21.47■■□□□ 1.03
SCAF8-201ENST00000367178 PNNQ9H307 717 aaKnown RBP21.46■■□□□ 1.03
SCAF8-201ENST00000367178 MORC1Q86VD1 984 aa21.45■■□□□ 1.02
SCAF8-201ENST00000367178 PPP4R2Q9NY27 417 aa21.44■■□□□ 1.02
SCAF8-201ENST00000367178 STK26Q9P289 416 aa21.44■■□□□ 1.02
SCAF8-201ENST00000367178 CCER2I3L3R5 266 aa21.43■■□□□ 1.02
SCAF8-201ENST00000367178 HNRNPMP52272 730 aaKnown RBP eCLIP21.42■■□□□ 1.022e-6■■■□□ 15.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms