RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 FAM9BQ8IZU0 186 aa14.75□□□□□ -0.05
CDC42BPA-205ENST00000366769 DDRGK1Q96HY6 314 aa14.75□□□□□ -0.05
CDC42BPA-205ENST00000366769 HSP90AA2PQ14568 343 aaPredicted RBP14.72□□□□□ -0.05
CDC42BPA-205ENST00000366769 NCBP3Q53F19 620 aaKnown RBP14.71□□□□□ -0.06
CDC42BPA-205ENST00000366769 PTMAP06454 111 aaKnown RBP14.7□□□□□ -0.06
CDC42BPA-205ENST00000366769 RSPH6AQ9H0K4 717 aa14.68□□□□□ -0.06
CDC42BPA-205ENST00000366769 PPM1GO15355 546 aaPredicted RBP14.67□□□□□ -0.06
CDC42BPA-205ENST00000366769 DNTTIP2Q5QJE6 756 aaKnown RBP14.66□□□□□ -0.06
CDC42BPA-205ENST00000366769 ZBTB7CA1YPR0 619 aa14.66□□□□□ -0.06
CDC42BPA-205ENST00000366769 NCLP19338 710 aaKnown RBP14.65□□□□□ -0.06
CDC42BPA-205ENST00000366769 SENP3-EIF4A1A0A087X0R7 540 aa14.65□□□□□ -0.06
CDC42BPA-205ENST00000366769 PLEKHG5O94827 1062 aa14.63□□□□□ -0.07
CDC42BPA-205ENST00000366769 TPRNQ4KMQ1 711 aa14.62□□□□□ -0.07
CDC42BPA-205ENST00000366769 FBLN2P98095 1184 aa14.62□□□□□ -0.07
CDC42BPA-205ENST00000366769 BECN1Q14457 450 aa14.61□□□□□ -0.07
CDC42BPA-205ENST00000366769 ARID3CA6NKF2 412 aa14.6□□□□□ -0.07
CDC42BPA-205ENST00000366769 PNNQ9H307 717 aaKnown RBP14.6□□□□□ -0.07
CDC42BPA-205ENST00000366769 ESF1Q9H501 851 aaKnown RBP14.6□□□□□ -0.07
CDC42BPA-205ENST00000366769 STAG3Q9UJ98 1225 aa14.59□□□□□ -0.07
CDC42BPA-205ENST00000366769 CHGAP10645 457 aaKnown RBP14.58□□□□□ -0.08
CDC42BPA-205ENST00000366769 B4GALNT3Q6L9W6 998 aa14.58□□□□□ -0.08
CDC42BPA-205ENST00000366769 HIRIP3Q9BW71 556 aaPredicted RBP14.56□□□□□ -0.08
CDC42BPA-205ENST00000366769 L1TD1Q5T7N2 865 aaKnown RBP14.54□□□□□ -0.08
CDC42BPA-205ENST00000366769 MRS2Q9HD23 443 aa14.52□□□□□ -0.09
CDC42BPA-205ENST00000366769 PPP4R2Q9NY27 417 aa14.52□□□□□ -0.09
CDC42BPA-205ENST00000366769 TAOK2Q9UL54 1235 aa14.51□□□□□ -0.09
CDC42BPA-205ENST00000366769 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.49□□□□□ -0.09
CDC42BPA-205ENST00000366769 IL27Q8NEV9 243 aa14.48□□□□□ -0.09
CDC42BPA-205ENST00000366769 ZNF777Q9ULD5 760 aaPredicted RBP14.47□□□□□ -0.09
CDC42BPA-205ENST00000366769 GZF1Q9H116 711 aaPredicted RBP14.46□□□□□ -0.09
CDC42BPA-205ENST00000366769 SPRYD3Q8NCJ5 442 aa14.46□□□□□ -0.09
CDC42BPA-205ENST00000366769 MSNP26038 577 aaKnown RBP14.46□□□□□ -0.09
CDC42BPA-205ENST00000366769 TNNT3P45378 269 aaPredicted RBP14.46□□□□□ -0.09
CDC42BPA-205ENST00000366769 MYH16Q9H6N6 1097 aa14.45□□□□□ -0.1
CDC42BPA-205ENST00000366769 ZRSR1Q15695 479 aaKnown RBP14.45□□□□□ -0.1
CDC42BPA-205ENST00000366769 SENP3Q9H4L4 574 aaPredicted RBP14.45□□□□□ -0.1
CDC42BPA-205ENST00000366769 BRPF3Q9ULD4 1205 aa14.43□□□□□ -0.1
CDC42BPA-205ENST00000366769 TONSLQ96HA7 1378 aa14.42□□□□□ -0.1
CDC42BPA-205ENST00000366769 GOLGA6L22H0YM25 854 aa14.42□□□□□ -0.1
CDC42BPA-205ENST00000366769 RGS3P49796 1198 aa14.42□□□□□ -0.1
CDC42BPA-205ENST00000366769 MAPK8IP2Q13387 824 aaPredicted RBP14.39□□□□□ -0.11
CDC42BPA-205ENST00000366769 C14orf37Q86TY3 774 aa14.39□□□□□ -0.11
CDC42BPA-205ENST00000366769 CHAF1AQ13111 956 aaPredicted RBP14.38□□□□□ -0.11
CDC42BPA-205ENST00000366769 P3H3Q8IVL6 736 aa14.38□□□□□ -0.11
CDC42BPA-205ENST00000366769 CLSTN1O94985 981 aa14.37□□□□□ -0.11
CDC42BPA-205ENST00000366769 USP35Q9P2H5 1018 aa14.37□□□□□ -0.11
CDC42BPA-205ENST00000366769 UBE2Q2Q8WVN8 375 aa14.36□□□□□ -0.11
CDC42BPA-205ENST00000366769 IPO9Q96P70 1041 aaKnown RBP14.36□□□□□ -0.11
CDC42BPA-205ENST00000366769 SLKQ9H2G2 1235 aaPredicted RBP14.32□□□□□ -0.12
CDC42BPA-205ENST00000366769 WDR43Q15061 677 aaKnown RBP eCLIP14.32□□□□□ -0.12
CDC42BPA-205ENST00000366769 PLCB2Q00722 1185 aa14.31□□□□□ -0.12
CDC42BPA-205ENST00000366769 TMC1Q8TDI8 760 aa14.31□□□□□ -0.12
CDC42BPA-205ENST00000366769 PRM3Q9NNZ6 103 aa14.3□□□□□ -0.12
CDC42BPA-205ENST00000366769 PDE4CQ08493 712 aa14.29□□□□□ -0.12
CDC42BPA-205ENST00000366769 GOLGA6L3A6NEY3 463 aa14.28□□□□□ -0.12
CDC42BPA-205ENST00000366769 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.27□□□□□ -0.132e-6■□□□□ 11.1
CDC42BPA-205ENST00000366769 FAM13BQ9NYF5 915 aa14.27□□□□□ -0.13
CDC42BPA-205ENST00000366769 NPHP1O15259 732 aa14.26□□□□□ -0.13
CDC42BPA-205ENST00000366769 ZNF771Q7L3S4 317 aaPredicted RBP14.26□□□□□ -0.13
CDC42BPA-205ENST00000366769 FANCIQ9NVI1 1328 aa14.25□□□□□ -0.13
CDC42BPA-205ENST00000366769 NAP1L2Q9ULW6 460 aaPredicted RBP14.25□□□□□ -0.13
CDC42BPA-205ENST00000366769 APPP05067 770 aa14.24□□□□□ -0.13
CDC42BPA-205ENST00000366769 HSP90AB1P08238 724 aaKnown RBP14.23□□□□□ -0.13
CDC42BPA-205ENST00000366769 HAP1P54257 671 aaPredicted RBP14.22□□□□□ -0.13
CDC42BPA-205ENST00000366769 GSE1Q14687 1217 aa14.22□□□□□ -0.13
CDC42BPA-205ENST00000366769 KDM2AQ9Y2K7 1162 aa14.21□□□□□ -0.14
CDC42BPA-205ENST00000366769 FGD1P98174 961 aa14.19□□□□□ -0.14
CDC42BPA-205ENST00000366769 HSCBQ8IWL3 235 aa14.18□□□□□ -0.14
CDC42BPA-205ENST00000366769 ISY1Q9ULR0 285 aaKnown RBP14.18□□□□□ -0.14
CDC42BPA-205ENST00000366769 GOLGA6L6A8MZA4 724 aa14.17□□□□□ -0.14
CDC42BPA-205ENST00000366769 CASC1Q6TDU7 716 aa14.16□□□□□ -0.14
CDC42BPA-205ENST00000366769 SLC4A3P48751 1232 aa14.15□□□□□ -0.14
CDC42BPA-205ENST00000366769 DRC7Q8IY82 874 aa14.15□□□□□ -0.14
CDC42BPA-205ENST00000366769 KIAA2012Q0VF49 1180 aa14.15□□□□□ -0.15
CDC42BPA-205ENST00000366769 NOC3LQ8WTT2 800 aaKnown RBP14.13□□□□□ -0.15
CDC42BPA-205ENST00000366769 KCNH8Q96L42 1107 aa14.13□□□□□ -0.15
CDC42BPA-205ENST00000366769 PTMSP20962 102 aa14.11□□□□□ -0.15
CDC42BPA-205ENST00000366769 NRDCO43847 1150 aa14.11□□□□□ -0.15
CDC42BPA-205ENST00000366769 KCNJ4P48050 445 aa14.11□□□□□ -0.15
CDC42BPA-205ENST00000366769 GOLGA2Q08379 1002 aa14.1□□□□□ -0.15
CDC42BPA-205ENST00000366769 ZMYND15Q9H091 742 aa14.1□□□□□ -0.15
CDC42BPA-205ENST00000366769 FTSJ3Q8IY81 847 aaKnown RBP14.09□□□□□ -0.15
CDC42BPA-205ENST00000366769 RBM10P98175 930 aaKnown RBP14.08□□□□□ -0.16
CDC42BPA-205ENST00000366769 CALRP27797 417 aaKnown RBP14.08□□□□□ -0.16
CDC42BPA-205ENST00000366769 FRAT1Q92837 279 aaPredicted RBP14.07□□□□□ -0.16
CDC42BPA-205ENST00000366769 OS9Q13438 667 aaPredicted RBP14.07□□□□□ -0.16
CDC42BPA-205ENST00000366769 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDC42BPA-205ENST00000366769 PPP1R15AO75807 674 aaPredicted RBP14.06□□□□□ -0.16
CDC42BPA-205ENST00000366769 FBXO3Q9UK99 471 aa14.06□□□□□ -0.16
CDC42BPA-205ENST00000366769 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
CDC42BPA-205ENST00000366769 GOLGA6L4A6NEF3 574 aa14.04□□□□□ -0.16
CDC42BPA-205ENST00000366769 PRDM10Q9NQV6 1147 aa14.04□□□□□ -0.16
CDC42BPA-205ENST00000366769 LMOD2Q6P5Q4 547 aa14.04□□□□□ -0.16
CDC42BPA-205ENST00000366769 GBP4Q96PP9 640 aa14.04□□□□□ -0.16
CDC42BPA-205ENST00000366769 CHIC2Q9UKJ5 165 aa14.04□□□□□ -0.16
CDC42BPA-205ENST00000366769 RRP9O43818 475 aaKnown RBP14.03□□□□□ -0.16
CDC42BPA-205ENST00000366769 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.02□□□□□ -0.16
CDC42BPA-205ENST00000366769 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.16
CDC42BPA-205ENST00000366769 AEBP1Q8IUX7 1158 aa14.02□□□□□ -0.17
CDC42BPA-205ENST00000366769 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms