RNA–Protein interactions for RNA: ENST00000365668.1

RNU4-2-201, Transcript of RNA, U4 small nuclear 2, humanhuman

BASIC

Gene RNU4-2, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-2-201ENST00000365668 BAZ1AQ9NRL2 1556 aaPredicted RBP10.1□□□□□ -0.79
RNU4-2-201ENST00000365668 CSRNP3Q8WYN3 585 aa10.1□□□□□ -0.79
RNU4-2-201ENST00000365668 ZNF579Q8NAF0 562 aaKnown RBP10.08□□□□□ -0.8
RNU4-2-201ENST00000365668 PLSCR2Q9NRY7 297 aa10.07□□□□□ -0.8
RNU4-2-201ENST00000365668 ZRANB1Q9UGI0 708 aa10.07□□□□□ -0.8
RNU4-2-201ENST00000365668 SMARCA2P51531 1590 aa10.06□□□□□ -0.8
RNU4-2-201ENST00000365668 BAZ1BQ9UIG0 1483 aaKnown RBP10.03□□□□□ -0.8
RNU4-2-201ENST00000365668 CREBZFQ9NS37 354 aa10.02□□□□□ -0.81
RNU4-2-201ENST00000365668 MROH2BQ7Z745 1585 aa10.01□□□□□ -0.81
RNU4-2-201ENST00000365668 SMARCA4P51532 1647 aa10□□□□□ -0.81
RNU4-2-201ENST00000365668 RSF1Q96T23 1441 aaPredicted RBP9.99□□□□□ -0.81
RNU4-2-201ENST00000365668 GALR2O43603 387 aaPredicted RBP9.99□□□□□ -0.81
RNU4-2-201ENST00000365668 STAG3Q9UJ98 1225 aa9.98□□□□□ -0.81
RNU4-2-201ENST00000365668 OTUD5Q96G74 571 aa9.97□□□□□ -0.81
RNU4-2-201ENST00000365668 HMGXB3Q12766 1538 aa9.96□□□□□ -0.82
RNU4-2-201ENST00000365668 POTEB2H3BUK9 544 aa9.93□□□□□ -0.82
RNU4-2-201ENST00000365668 PEG3Q9GZU2 1588 aa9.92□□□□□ -0.82
RNU4-2-201ENST00000365668 SUPT5HO00267 1087 aaKnown RBP9.91□□□□□ -0.82
RNU4-2-201ENST00000365668 CADPSQ9ULU8 1353 aa9.9□□□□□ -0.82
RNU4-2-201ENST00000365668 PAK3O75914 559 aaPredicted RBP9.9□□□□□ -0.82
RNU4-2-201ENST00000365668 ERCC6Q03468 1493 aa9.89□□□□□ -0.83
RNU4-2-201ENST00000365668 PHF12Q96QT6 1004 aa9.88□□□□□ -0.83
RNU4-2-201ENST00000365668 PDS5BQ9NTI5 1447 aa9.88□□□□□ -0.83
RNU4-2-201ENST00000365668 POTEMA6NI47 508 aa9.84□□□□□ -0.83
RNU4-2-201ENST00000365668 PELP1Q8IZL8 1130 aaKnown RBP9.84□□□□□ -0.83
RNU4-2-201ENST00000365668 SPDYE4A6NLX3 237 aa9.83□□□□□ -0.84
RNU4-2-201ENST00000365668 NPM1P06748 294 aaKnown RBP eCLIP9.83□□□□□ -0.84
RNU4-2-201ENST00000365668 MNX1P50219 401 aaPredicted RBP9.81□□□□□ -0.84
RNU4-2-201ENST00000365668 POTEGQ6S5H5 508 aa9.81□□□□□ -0.84
RNU4-2-201ENST00000365668 TOP2AP11388 1531 aaKnown RBP9.79□□□□□ -0.84
RNU4-2-201ENST00000365668 WIZO95785 1651 aa9.79□□□□□ -0.84
RNU4-2-201ENST00000365668 NESP48681 1621 aa9.78□□□□□ -0.84
RNU4-2-201ENST00000365668 RTN4Q9NQC3 1192 aaKnown RBP9.78□□□□□ -0.84
RNU4-2-201ENST00000365668 AMER1Q5JTC6 1135 aaPredicted RBP9.76□□□□□ -0.85
RNU4-2-201ENST00000365668 ASTLQ6HA08 431 aaPredicted RBP9.76□□□□□ -0.85
RNU4-2-201ENST00000365668 CFTRP13569 1480 aa9.76□□□□□ -0.85
RNU4-2-201ENST00000365668 CCDC88BA6NC98 1476 aa9.75□□□□□ -0.85
RNU4-2-201ENST00000365668 METRNQ9UJH8 293 aa9.75□□□□□ -0.85
RNU4-2-201ENST00000365668 LAMC3Q9Y6N6 1575 aa9.75□□□□□ -0.85
RNU4-2-201ENST00000365668 ATMINO43313 823 aaPredicted RBP9.74□□□□□ -0.85
RNU4-2-201ENST00000365668 C7P10643 843 aa9.74□□□□□ -0.85
RNU4-2-201ENST00000365668 SLC39A7Q92504 469 aa9.74□□□□□ -0.85
RNU4-2-201ENST00000365668 MS4A3Q96HJ5 214 aa9.74□□□□□ -0.85
RNU4-2-201ENST00000365668 POTEJP0CG39 1038 aa9.73□□□□□ -0.85
RNU4-2-201ENST00000365668 PCDH10Q9P2E7 1040 aa9.73□□□□□ -0.85
RNU4-2-201ENST00000365668 CUX2O14529 1486 aa9.72□□□□□ -0.85
RNU4-2-201ENST00000365668 FANCD2Q9BXW9 1451 aa9.71□□□□□ -0.86
RNU4-2-201ENST00000365668 MAMSTRQ6ZN01 415 aa9.7□□□□□ -0.86
RNU4-2-201ENST00000365668 CEP164Q9UPV0 1460 aa9.68□□□□□ -0.86
RNU4-2-201ENST00000365668 MRC2Q9UBG0 1479 aa9.66□□□□□ -0.86
RNU4-2-201ENST00000365668 TSPYL2Q9H2G4 693 aaPredicted RBP9.64□□□□□ -0.87
RNU4-2-201ENST00000365668 ATN1P54259 1190 aaPredicted RBP9.62□□□□□ -0.87
RNU4-2-201ENST00000365668 LCE2DQ5TA82 110 aaPredicted RBP9.62□□□□□ -0.87
RNU4-2-201ENST00000365668 FAM163AQ96GL9 167 aaPredicted RBP9.62□□□□□ -0.87
RNU4-2-201ENST00000365668 SCUBE2Q9NQ36 999 aa9.61□□□□□ -0.87
RNU4-2-201ENST00000365668 CCDC61Q9Y6R9 512 aa9.61□□□□□ -0.87
RNU4-2-201ENST00000365668 ABCC8Q09428 1581 aa9.6□□□□□ -0.87
RNU4-2-201ENST00000365668 KIF12Q96FN5 646 aa9.59□□□□□ -0.87
RNU4-2-201ENST00000365668 DNAJC5Q9H3Z4 198 aa9.57□□□□□ -0.88
RNU4-2-201ENST00000365668 POTEFA5A3E0 1075 aa9.56□□□□□ -0.88
RNU4-2-201ENST00000365668 BMP2KQ9NSY1 1161 aaPredicted RBP9.55□□□□□ -0.88
RNU4-2-201ENST00000365668 WDR62O43379 1518 aa9.54□□□□□ -0.88
RNU4-2-201ENST00000365668 PROM2Q8N271 834 aa9.53□□□□□ -0.88
RNU4-2-201ENST00000365668 URB2Q14146 1524 aaKnown RBP9.52□□□□□ -0.88
RNU4-2-201ENST00000365668 TRPC6Q9Y210 931 aa9.52□□□□□ -0.89
RNU4-2-201ENST00000365668 IFT140Q96RY7 1462 aa9.52□□□□□ -0.89
RNU4-2-201ENST00000365668 SOGA1O94964 1423 aa9.51□□□□□ -0.89
RNU4-2-201ENST00000365668 MAP3K13O43283 966 aa9.51□□□□□ -0.89
RNU4-2-201ENST00000365668 TIE1P35590 1138 aa9.51□□□□□ -0.89
RNU4-2-201ENST00000365668 TOPBP1Q92547 1522 aa9.5□□□□□ -0.89
RNU4-2-201ENST00000365668 THOC2Q8NI27 1593 aaKnown RBP9.5□□□□□ -0.89
RNU4-2-201ENST00000365668 SEC24BO95487 1268 aa9.46□□□□□ -0.9
RNU4-2-201ENST00000365668 CHMP7Q8WUX9 453 aaPredicted RBP9.46□□□□□ -0.9
RNU4-2-201ENST00000365668 COLQQ9Y215 455 aaPredicted RBP9.46□□□□□ -0.9
RNU4-2-201ENST00000365668 TDRD9Q8NDG6 1382 aaKnown RBP9.46□□□□□ -0.9
RNU4-2-201ENST00000365668 WRNQ14191 1432 aaPredicted RBP eCLIP9.46□□□□□ -0.9
RNU4-2-201ENST00000365668 RASEFQ8IZ41 740 aa9.45□□□□□ -0.9
RNU4-2-201ENST00000365668 KIF21AQ7Z4S6 1674 aa9.45□□□□□ -0.9
RNU4-2-201ENST00000365668 TTLL13PA6NNM8 815 aa9.44□□□□□ -0.9
RNU4-2-201ENST00000365668 PLEKHG5O94827 1062 aa9.44□□□□□ -0.9
RNU4-2-201ENST00000365668 MIER1Q8N108 512 aa9.44□□□□□ -0.9
RNU4-2-201ENST00000365668 DNMBPQ6XZF7 1577 aa9.44□□□□□ -0.9
RNU4-2-201ENST00000365668 POLA1P09884 1462 aaPredicted RBP9.42□□□□□ -0.9
RNU4-2-201ENST00000365668 CDAN1Q8IWY9 1227 aa9.42□□□□□ -0.9
RNU4-2-201ENST00000365668 AQRO60306 1485 aaKnown RBP eCLIP9.41□□□□□ -0.9
RNU4-2-201ENST00000365668 RAD54L2Q9Y4B4 1467 aa9.4□□□□□ -0.9
RNU4-2-201ENST00000365668 TRIM41Q8WV44 630 aa9.4□□□□□ -0.9
RNU4-2-201ENST00000365668 ZNF608Q9ULD9 1512 aaPredicted RBP9.4□□□□□ -0.91
RNU4-2-201ENST00000365668 FGD5Q6ZNL6 1462 aa9.4□□□□□ -0.91
RNU4-2-201ENST00000365668 IER5LQ5T953 404 aa9.39□□□□□ -0.91
RNU4-2-201ENST00000365668 CUX1P39880 1505 aa9.38□□□□□ -0.91
RNU4-2-201ENST00000365668 SGIP1Q9BQI5 828 aa9.38□□□□□ -0.91
RNU4-2-201ENST00000365668 TRIM35Q9UPQ4 493 aa9.38□□□□□ -0.91
RNU4-2-201ENST00000365668 GRIN2BQ13224 1484 aa9.35□□□□□ -0.91
RNU4-2-201ENST00000365668 PCDHB13Q9Y5F0 798 aa9.35□□□□□ -0.91
RNU4-2-201ENST00000365668 SLAIN1Q8ND83 568 aa9.34□□□□□ -0.91
RNU4-2-201ENST00000365668 GAPVD1Q14C86 1478 aa9.34□□□□□ -0.91
RNU4-2-201ENST00000365668 ABCA10Q8WWZ4 1543 aa9.33□□□□□ -0.92
RNU4-2-201ENST00000365668 ST18O60284 1047 aa9.33□□□□□ -0.92
RNU4-2-201ENST00000365668 KIF27Q86VH2 1401 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms