RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 DDX10Q13206 875 aaKnown RBP15.76■□□□□ 0.11
CNOT4-203ENST00000361528 EIF4G1Q04637 1599 aaKnown RBP15.76■□□□□ 0.11
CNOT4-203ENST00000361528 CUX2O14529 1486 aa15.76■□□□□ 0.11
CNOT4-203ENST00000361528 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
CNOT4-203ENST00000361528 GSE1Q14687 1217 aa15.74■□□□□ 0.11
CNOT4-203ENST00000361528 TIMELESSQ9UNS1 1208 aa15.74■□□□□ 0.11
CNOT4-203ENST00000361528 IRX6P78412 446 aaPredicted RBP15.71■□□□□ 0.11
CNOT4-203ENST00000361528 VPS8Q8N3P4 1428 aa15.7■□□□□ 0.1
CNOT4-203ENST00000361528 RRP9O43818 475 aaKnown RBP15.69■□□□□ 0.1
CNOT4-203ENST00000361528 B4GALNT3Q6L9W6 998 aa15.67■□□□□ 0.1
CNOT4-203ENST00000361528 HNRNPUQ00839 825 aaKnown RBP eCLIP15.65■□□□□ 0.1
CNOT4-203ENST00000361528 NCAPD3P42695 1498 aa15.65■□□□□ 0.1
CNOT4-203ENST00000361528 CEP164Q9UPV0 1460 aa15.64■□□□□ 0.09
CNOT4-203ENST00000361528 UBTFP17480 764 aaKnown RBP15.63■□□□□ 0.09
CNOT4-203ENST00000361528 CLIP1P30622 1438 aa15.63■□□□□ 0.09
CNOT4-203ENST00000361528 ABCC8Q09428 1581 aa15.61■□□□□ 0.09
CNOT4-203ENST00000361528 HSP90AA2PQ14568 343 aaPredicted RBP15.6■□□□□ 0.09
CNOT4-203ENST00000361528 CCDC88BA6NC98 1476 aa15.58■□□□□ 0.09
CNOT4-203ENST00000361528 FGD1P98174 961 aa15.58■□□□□ 0.08
CNOT4-203ENST00000361528 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
CNOT4-203ENST00000361528 WDR97A6NE52 1622 aa15.56■□□□□ 0.08
CNOT4-203ENST00000361528 LAS1LQ9Y4W2 734 aaKnown RBP15.56■□□□□ 0.08
CNOT4-203ENST00000361528 MAPKBP1O60336 1514 aa15.55■□□□□ 0.08
CNOT4-203ENST00000361528 RRBP1Q9P2E9 1410 aaKnown RBP15.55■□□□□ 0.08
CNOT4-203ENST00000361528 AAMPQ13685 434 aa15.55■□□□□ 0.08
CNOT4-203ENST00000361528 SOGA1O94964 1423 aa15.55■□□□□ 0.08
CNOT4-203ENST00000361528 FRAT1Q92837 279 aaPredicted RBP15.53■□□□□ 0.08
CNOT4-203ENST00000361528 KIF21BO75037 1637 aa15.53■□□□□ 0.08
CNOT4-203ENST00000361528 HSP90AA1P07900 732 aaKnown RBP15.52■□□□□ 0.08
CNOT4-203ENST00000361528 RBM10P98175 930 aaKnown RBP15.52■□□□□ 0.08
CNOT4-203ENST00000361528 DDRGK1Q96HY6 314 aa15.52■□□□□ 0.07
CNOT4-203ENST00000361528 PDE4CQ08493 712 aa15.51■□□□□ 0.07
CNOT4-203ENST00000361528 PEG3Q9GZU2 1588 aa15.5■□□□□ 0.07
CNOT4-203ENST00000361528 ZBED9Q6R2W3 1325 aa15.49■□□□□ 0.07
CNOT4-203ENST00000361528 BAZ1BQ9UIG0 1483 aaKnown RBP15.49■□□□□ 0.07
CNOT4-203ENST00000361528 SCRIBQ14160 1630 aa15.48■□□□□ 0.07
CNOT4-203ENST00000361528 CENPJQ9HC77 1338 aaPredicted RBP15.47■□□□□ 0.07
CNOT4-203ENST00000361528 TCERG1O14776 1098 aaKnown RBP15.47■□□□□ 0.07
CNOT4-203ENST00000361528 NFKBIBQ15653 356 aa15.47■□□□□ 0.07
CNOT4-203ENST00000361528 RNF123Q5XPI4 1314 aa15.45■□□□□ 0.06
CNOT4-203ENST00000361528 MS4A1P11836 297 aa15.44■□□□□ 0.06
CNOT4-203ENST00000361528 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
CNOT4-203ENST00000361528 CALD1Q05682 793 aaKnown RBP15.42■□□□□ 0.06
CNOT4-203ENST00000361528 A0A0U1RQG5 324 aaPredicted RBP15.41■□□□□ 0.06
CNOT4-203ENST00000361528 SMG6Q86US8 1419 aaKnown RBP15.41■□□□□ 0.06
CNOT4-203ENST00000361528 PDIA4P13667 645 aaKnown RBP15.39■□□□□ 0.05
CNOT4-203ENST00000361528 DCAF11Q8TEB1 546 aa15.39■□□□□ 0.05
CNOT4-203ENST00000361528 RRAGDQ9NQL2 400 aaPredicted RBP15.39■□□□□ 0.05
CNOT4-203ENST00000361528 NPM2Q86SE8 214 aaKnown RBP15.38■□□□□ 0.05
CNOT4-203ENST00000361528 NAP1L5Q96NT1 182 aaPredicted RBP15.38■□□□□ 0.05
CNOT4-203ENST00000361528 BACH2Q9BYV9 841 aa15.38■□□□□ 0.05
CNOT4-203ENST00000361528 PNNQ9H307 717 aaKnown RBP15.38■□□□□ 0.05
CNOT4-203ENST00000361528 RAB3GAP2Q9H2M9 1393 aa15.37■□□□□ 0.05
CNOT4-203ENST00000361528 RUSC2Q8N2Y8 1516 aa15.37■□□□□ 0.05
CNOT4-203ENST00000361528 PDE4AP27815 886 aa15.37■□□□□ 0.05
CNOT4-203ENST00000361528 CLCN1P35523 988 aa15.36■□□□□ 0.05
CNOT4-203ENST00000361528 L1TD1Q5T7N2 865 aaKnown RBP15.36■□□□□ 0.05
CNOT4-203ENST00000361528 CCNB3Q8WWL7 1395 aa15.36■□□□□ 0.05
CNOT4-203ENST00000361528 MROH2BQ7Z745 1585 aa15.35■□□□□ 0.05
CNOT4-203ENST00000361528 PDCL3Q9H2J4 239 aa15.34■□□□□ 0.05
CNOT4-203ENST00000361528 PRDM4Q9UKN5 801 aa15.33■□□□□ 0.04
CNOT4-203ENST00000361528 WIZO95785 1651 aa15.33■□□□□ 0.04
CNOT4-203ENST00000361528 PABPN1Q86U42 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
CNOT4-203ENST00000361528 SETD5Q9C0A6 1442 aa15.3■□□□□ 0.04
CNOT4-203ENST00000361528 SIN3AQ96ST3 1273 aa15.29■□□□□ 0.04
CNOT4-203ENST00000361528 TPM2P07951 284 aa15.28■□□□□ 0.04
CNOT4-203ENST00000361528 NUDCQ9Y266 331 aa15.28■□□□□ 0.04
CNOT4-203ENST00000361528 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.03
CNOT4-203ENST00000361528 NCOA2Q15596 1464 aa15.25■□□□□ 0.03
CNOT4-203ENST00000361528 AKNAQ7Z591 1439 aa15.25■□□□□ 0.03
CNOT4-203ENST00000361528 HIRIP3Q9BW71 556 aaPredicted RBP15.24■□□□□ 0.03
CNOT4-203ENST00000361528 CECR2Q9BXF3 1484 aa15.23■□□□□ 0.03
CNOT4-203ENST00000361528 TAF7LQ5H9L4 462 aa15.23■□□□□ 0.03
CNOT4-203ENST00000361528 CNTLNQ9NXG0 1405 aa15.22■□□□□ 0.03
CNOT4-203ENST00000361528 BCL11BQ9C0K0 894 aaPredicted RBP15.21■□□□□ 0.03
CNOT4-203ENST00000361528 UNC13AQ9UPW8 1703 aa15.21■□□□□ 0.03
CNOT4-203ENST00000361528 SYNJ1O43426 1573 aa15.2■□□□□ 0.02
CNOT4-203ENST00000361528 FRAT2O75474 233 aaPredicted RBP15.2■□□□□ 0.02
CNOT4-203ENST00000361528 TOP2AP11388 1531 aaKnown RBP15.18■□□□□ 0.02
CNOT4-203ENST00000361528 KANK4Q5T7N3 995 aaPredicted RBP15.17■□□□□ 0.02
CNOT4-203ENST00000361528 NCLP19338 710 aaKnown RBP15.17■□□□□ 0.02
CNOT4-203ENST00000361528 FAM9BQ8IZU0 186 aa15.17■□□□□ 0.02
CNOT4-203ENST00000361528 MAP7D2Q96T17 732 aa15.17■□□□□ 0.02
CNOT4-203ENST00000361528 MRS2Q9HD23 443 aa15.17■□□□□ 0.02
CNOT4-203ENST00000361528 TONSLQ96HA7 1378 aa15.16■□□□□ 0.02
CNOT4-203ENST00000361528 ARAP1Q96P48 1450 aa15.16■□□□□ 0.02
CNOT4-203ENST00000361528 PRKRIP1Q9H875 184 aaPredicted RBP15.16■□□□□ 0.02
CNOT4-203ENST00000361528 RGS3P49796 1198 aa15.13■□□□□ 0.01
CNOT4-203ENST00000361528 CCDC184Q52MB2 194 aa15.13■□□□□ 0.01
CNOT4-203ENST00000361528 SMAP1Q8IYB5 467 aaPredicted RBP15.13■□□□□ 0.01
CNOT4-203ENST00000361528 RAPGEF2Q9Y4G8 1499 aa15.13■□□□□ 0.01
CNOT4-203ENST00000361528 ZNF326Q5BKZ1 582 aaKnown RBP15.12■□□□□ 0.01
CNOT4-203ENST00000361528 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
CNOT4-203ENST00000361528 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
CNOT4-203ENST00000361528 FSD2A1L4K1 749 aa15.08■□□□□ 0
CNOT4-203ENST00000361528 TERF1P54274 439 aa15.08■□□□□ 0
CNOT4-203ENST00000361528 GOLGA6L3A6NEY3 463 aa15.07■□□□□ 0
CNOT4-203ENST00000361528 POGKQ9P215 609 aa15.07■□□□□ 0
CNOT4-203ENST00000361528 MAP3K1Q13233 1512 aa15.07■□□□□ 0
CNOT4-203ENST00000361528 RRP1P56182 461 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms