RNA–Protein interactions for RNA: ENST00000360218.2

CTSE-202, Transcript of cathepsin E, humanhuman

TSL 1 (best) BASIC

Gene CTSE, Length 2,071 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-202ENST00000360218 ADAMTS12P58397 1594 aa17.01■□□□□ 0.31
CTSE-202ENST00000360218 ZNF608Q9ULD9 1512 aaPredicted RBP17.01■□□□□ 0.31
CTSE-202ENST00000360218 EFCAB5A4FU69 1503 aa17■□□□□ 0.31
CTSE-202ENST00000360218 PCF11O94913 1555 aaKnown RBP16.98■□□□□ 0.31
CTSE-202ENST00000360218 KANK4Q5T7N3 995 aaPredicted RBP16.98■□□□□ 0.31
CTSE-202ENST00000360218 GRIN2BQ13224 1484 aa16.98■□□□□ 0.31
CTSE-202ENST00000360218 FHOD3Q2V2M9 1422 aa16.97■□□□□ 0.31
CTSE-202ENST00000360218 P3H3Q8IVL6 736 aa16.97■□□□□ 0.31
CTSE-202ENST00000360218 EIF4G3O43432 1585 aaKnown RBP16.97■□□□□ 0.31
CTSE-202ENST00000360218 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.31
CTSE-202ENST00000360218 TIAM1Q13009 1591 aa16.95■□□□□ 0.3
CTSE-202ENST00000360218 SAMD9Q5K651 1589 aa16.95■□□□□ 0.3
CTSE-202ENST00000360218 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
CTSE-202ENST00000360218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.93■□□□□ 0.3
CTSE-202ENST00000360218 CFAP43Q8NDM7 1665 aa16.93■□□□□ 0.3
CTSE-202ENST00000360218 MAP3K1Q13233 1512 aa16.91■□□□□ 0.3
CTSE-202ENST00000360218 SNAPC4Q5SXM2 1469 aa16.89■□□□□ 0.29
CTSE-202ENST00000360218 FYCO1Q9BQS8 1478 aa16.87■□□□□ 0.29
CTSE-202ENST00000360218 HNRNPUL2Q1KMD3 747 aaKnown RBP16.87■□□□□ 0.29
CTSE-202ENST00000360218 IQGAP2Q13576 1575 aa16.86■□□□□ 0.29
CTSE-202ENST00000360218 CCER1Q8TC90 406 aaPredicted RBP16.86■□□□□ 0.29
CTSE-202ENST00000360218 CASKIN1Q8WXD9 1431 aa16.85■□□□□ 0.29
CTSE-202ENST00000360218 LRRC9Q6ZRR7 1453 aa16.84■□□□□ 0.29
CTSE-202ENST00000360218 FMN1Q68DA7 1419 aa16.83■□□□□ 0.28
CTSE-202ENST00000360218 LRRIQ1Q96JM4 1722 aa16.83■□□□□ 0.28
CTSE-202ENST00000360218 RRBP1Q9P2E9 1410 aaKnown RBP16.82■□□□□ 0.28
CTSE-202ENST00000360218 ATP1B4Q9UN42 357 aaPredicted RBP16.82■□□□□ 0.28
CTSE-202ENST00000360218 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
CTSE-202ENST00000360218 MAGI1Q96QZ7 1491 aaPredicted RBP16.79■□□□□ 0.28
CTSE-202ENST00000360218 UGGT2Q9NYU1 1516 aa16.76■□□□□ 0.27
CTSE-202ENST00000360218 CCNB3Q8WWL7 1395 aa16.75■□□□□ 0.27
CTSE-202ENST00000360218 SYNJ2O15056 1496 aa16.74■□□□□ 0.27
CTSE-202ENST00000360218 KIAA0586Q9BVV6 1533 aa16.74■□□□□ 0.27
CTSE-202ENST00000360218 CEP170Q5SW79 1584 aa16.73■□□□□ 0.27
CTSE-202ENST00000360218 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
CTSE-202ENST00000360218 KIAA0556O60303 1618 aa16.71■□□□□ 0.27
CTSE-202ENST00000360218 HECW1Q76N89 1606 aa16.69■□□□□ 0.26
CTSE-202ENST00000360218 DISP1Q96F81 1524 aa16.69■□□□□ 0.26
CTSE-202ENST00000360218 CHMP7Q8WUX9 453 aaPredicted RBP16.68■□□□□ 0.26
CTSE-202ENST00000360218 FBLN2P98095 1184 aa16.65■□□□□ 0.26
CTSE-202ENST00000360218 MTUS2Q5JR59 1369 aa16.64■□□□□ 0.25
CTSE-202ENST00000360218 CCDC18Q5T9S5 1454 aa16.64■□□□□ 0.25
CTSE-202ENST00000360218 NUP160Q12769 1436 aa16.63■□□□□ 0.25
CTSE-202ENST00000360218 MAGI3Q5TCQ9 1506 aa16.63■□□□□ 0.25
CTSE-202ENST00000360218 EHBP1L1Q8N3D4 1523 aa16.63■□□□□ 0.25
CTSE-202ENST00000360218 ITGAEP38570 1179 aa16.63■□□□□ 0.25
CTSE-202ENST00000360218 SUPT6HQ7KZ85 1726 aaKnown RBP16.62■□□□□ 0.25
CTSE-202ENST00000360218 EPRSP07814 1512 aaKnown RBP16.61■□□□□ 0.25
CTSE-202ENST00000360218 CDK13Q14004 1512 aaKnown RBP16.6■□□□□ 0.25
CTSE-202ENST00000360218 NCOA2Q15596 1464 aa16.59■□□□□ 0.25
CTSE-202ENST00000360218 CHD1O14646 1710 aa16.59■□□□□ 0.25
CTSE-202ENST00000360218 FAM50AQ14320 339 aaKnown RBP16.58■□□□□ 0.25
CTSE-202ENST00000360218 RAPGEF6Q8TEU7 1601 aa16.58■□□□□ 0.24
CTSE-202ENST00000360218 FGD6Q6ZV73 1430 aa16.56■□□□□ 0.24
CTSE-202ENST00000360218 DHX57Q6P158 1386 aaKnown RBP16.55■□□□□ 0.24
CTSE-202ENST00000360218 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
CTSE-202ENST00000360218 ARID3CA6NKF2 412 aa16.54■□□□□ 0.24
CTSE-202ENST00000360218 NUP153P49790 1475 aaKnown RBP16.53■□□□□ 0.24
CTSE-202ENST00000360218 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
CTSE-202ENST00000360218 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.52■□□□□ 0.23
CTSE-202ENST00000360218 JPH4Q96JJ6 628 aa16.51■□□□□ 0.23
CTSE-202ENST00000360218 CARMIL2Q6F5E8 1435 aa16.5■□□□□ 0.23
CTSE-202ENST00000360218 RAB3GAP2Q9H2M9 1393 aa16.5■□□□□ 0.23
CTSE-202ENST00000360218 PTPN23Q9H3S7 1636 aa16.49■□□□□ 0.23
CTSE-202ENST00000360218 SETD5Q9C0A6 1442 aa16.48■□□□□ 0.23
CTSE-202ENST00000360218 PLB1Q6P1J6 1458 aa16.48■□□□□ 0.23
CTSE-202ENST00000360218 AEBP2Q6ZN18 517 aaPredicted RBP16.46■□□□□ 0.22
CTSE-202ENST00000360218 PELP1Q8IZL8 1130 aaKnown RBP16.45■□□□□ 0.22
CTSE-202ENST00000360218 CLSPNQ9HAW4 1339 aa16.43■□□□□ 0.22
CTSE-202ENST00000360218 ABCA8O94911 1581 aa16.43■□□□□ 0.22
CTSE-202ENST00000360218 PTPRKQ15262 1439 aa16.43■□□□□ 0.22
CTSE-202ENST00000360218 TCOF1Q13428 1488 aaKnown RBP16.42■□□□□ 0.22
CTSE-202ENST00000360218 PRG4Q92954 1404 aaPredicted RBP16.42■□□□□ 0.22
CTSE-202ENST00000360218 SHROOM2Q13796 1616 aa16.41■□□□□ 0.22
CTSE-202ENST00000360218 MAPKBP1O60336 1514 aa16.39■□□□□ 0.21
CTSE-202ENST00000360218 ADCY10Q96PN6 1610 aa16.37■□□□□ 0.21
CTSE-202ENST00000360218 KIF14Q15058 1648 aa16.37■□□□□ 0.21
CTSE-202ENST00000360218 MIA2Q96PC5 1412 aa16.37■□□□□ 0.21
CTSE-202ENST00000360218 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
CTSE-202ENST00000360218 HFM1A2PYH4 1435 aa16.34■□□□□ 0.21
CTSE-202ENST00000360218 CDK11AQ9UQ88 783 aaPredicted RBP16.34■□□□□ 0.21
CTSE-202ENST00000360218 ERCC6L2Q5T890 1561 aa16.34■□□□□ 0.21
CTSE-202ENST00000360218 GCC2Q8IWJ2 1684 aa16.32■□□□□ 0.2
CTSE-202ENST00000360218 ITSN2Q9NZM3 1697 aa16.32■□□□□ 0.2
CTSE-202ENST00000360218 PTPRGP23470 1445 aa16.32■□□□□ 0.2
CTSE-202ENST00000360218 CLASP1Q7Z460 1538 aa16.32■□□□□ 0.2
CTSE-202ENST00000360218 NAIPQ13075 1403 aa16.32■□□□□ 0.2
CTSE-202ENST00000360218 ATP10BO94823 1461 aa16.32■□□□□ 0.2
CTSE-202ENST00000360218 DNMT1P26358 1616 aaKnown RBP16.29■□□□□ 0.2
CTSE-202ENST00000360218 ZNF316A6NFI3 1004 aaPredicted RBP16.28■□□□□ 0.2
CTSE-202ENST00000360218 CHIC2Q9UKJ5 165 aa16.27■□□□□ 0.2
CTSE-202ENST00000360218 CDC42BPAQ5VT25 1732 aa16.26■□□□□ 0.19
CTSE-202ENST00000360218 GPATCH8Q9UKJ3 1502 aaKnown RBP16.26■□□□□ 0.19
CTSE-202ENST00000360218 DAPK1P53355 1430 aa16.26■□□□□ 0.19
CTSE-202ENST00000360218 KDM6BO15054 1643 aa16.26■□□□□ 0.19
CTSE-202ENST00000360218 ZNF644Q9H582 1327 aaPredicted RBP16.25■□□□□ 0.19
CTSE-202ENST00000360218 CAMSAP2Q08AD1 1489 aa16.25■□□□□ 0.19
CTSE-202ENST00000360218 RRP7BPQ9NSQ0 103 aa16.25■□□□□ 0.19
CTSE-202ENST00000360218 AKNAQ7Z591 1439 aa16.24■□□□□ 0.19
CTSE-202ENST00000360218 UACAQ9BZF9 1416 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms