RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 ADAMTS12P58397 1594 aa32.39■■■□□ 2.78
FAM3A-202ENST00000359889 CTTNBP2Q8WZ74 1663 aa32.38■■■□□ 2.77
FAM3A-202ENST00000359889 EIF4G3O43432 1585 aaKnown RBP32.36■■■□□ 2.77
FAM3A-202ENST00000359889 EFCAB5A4FU69 1503 aa32.35■■■□□ 2.77
FAM3A-202ENST00000359889 TTBK1Q5TCY1 1321 aaPredicted RBP32.3■■■□□ 2.76
FAM3A-202ENST00000359889 SNAPC4Q5SXM2 1469 aa32.28■■■□□ 2.76
FAM3A-202ENST00000359889 MAGI1Q96QZ7 1491 aaPredicted RBP32.26■■■□□ 2.75
FAM3A-202ENST00000359889 P3H3Q8IVL6 736 aa32.2■■■□□ 2.75
FAM3A-202ENST00000359889 FHOD3Q2V2M9 1422 aa32.15■■■□□ 2.74
FAM3A-202ENST00000359889 CHMP7Q8WUX9 453 aaPredicted RBP32.14■■■□□ 2.74
FAM3A-202ENST00000359889 GRIN2AQ12879 1464 aa32.14■■■□□ 2.74
FAM3A-202ENST00000359889 SYNJ2O15056 1496 aa32.13■■■□□ 2.73
FAM3A-202ENST00000359889 FMN1Q68DA7 1419 aa32.12■■■□□ 2.73
FAM3A-202ENST00000359889 IQGAP2Q13576 1575 aa32.11■■■□□ 2.73
FAM3A-202ENST00000359889 SAMD9Q5K651 1589 aa32.1■■■□□ 2.73
FAM3A-202ENST00000359889 HRCP23327 699 aa32.09■■■□□ 2.73
FAM3A-202ENST00000359889 MAP3K1Q13233 1512 aa32.08■■■□□ 2.73
FAM3A-202ENST00000359889 KIAA0586Q9BVV6 1533 aa32.07■■■□□ 2.72
FAM3A-202ENST00000359889 FYCO1Q9BQS8 1478 aa32.02■■■□□ 2.72
FAM3A-202ENST00000359889 CASKIN1Q8WXD9 1431 aa32.02■■■□□ 2.72
FAM3A-202ENST00000359889 FBLN2P98095 1184 aa32.01■■■□□ 2.72
FAM3A-202ENST00000359889 KANK4Q5T7N3 995 aaPredicted RBP32■■■□□ 2.71
FAM3A-202ENST00000359889 ATP1B4Q9UN42 357 aaPredicted RBP31.99■■■□□ 2.71
FAM3A-202ENST00000359889 PCF11O94913 1555 aaKnown RBP31.98■■■□□ 2.71
FAM3A-202ENST00000359889 UGGT2Q9NYU1 1516 aa31.97■■■□□ 2.71
FAM3A-202ENST00000359889 TIAM1Q13009 1591 aa31.96■■■□□ 2.71
FAM3A-202ENST00000359889 NUP160Q12769 1436 aa31.88■■■□□ 2.69
FAM3A-202ENST00000359889 LRRC9Q6ZRR7 1453 aa31.86■■■□□ 2.69
FAM3A-202ENST00000359889 CEP170Q5SW79 1584 aa31.85■■■□□ 2.69
FAM3A-202ENST00000359889 CFAP43Q8NDM7 1665 aa31.83■■■□□ 2.69
FAM3A-202ENST00000359889 ZEB1P37275 1124 aaPredicted RBP31.78■■■□□ 2.68
FAM3A-202ENST00000359889 KIAA0556O60303 1618 aa31.76■■■□□ 2.67
FAM3A-202ENST00000359889 DISP1Q96F81 1524 aa31.76■■■□□ 2.67
FAM3A-202ENST00000359889 CARMIL2Q6F5E8 1435 aa31.74■■■□□ 2.67
FAM3A-202ENST00000359889 JPH4Q96JJ6 628 aa31.73■■■□□ 2.67
FAM3A-202ENST00000359889 RRBP1Q9P2E9 1410 aaKnown RBP31.72■■■□□ 2.67
FAM3A-202ENST00000359889 CCDC18Q5T9S5 1454 aa31.7■■■□□ 2.67
FAM3A-202ENST00000359889 HECW1Q76N89 1606 aa31.68■■■□□ 2.66
FAM3A-202ENST00000359889 HNRNPUL2Q1KMD3 747 aaKnown RBP31.68■■■□□ 2.66
FAM3A-202ENST00000359889 MTUS2Q5JR59 1369 aa31.66■■■□□ 2.66
FAM3A-202ENST00000359889 CCNB3Q8WWL7 1395 aa31.66■■■□□ 2.66
FAM3A-202ENST00000359889 CCER1Q8TC90 406 aaPredicted RBP31.58■■■□□ 2.65
FAM3A-202ENST00000359889 CHD1O14646 1710 aa31.56■■■□□ 2.64
FAM3A-202ENST00000359889 PHLDB1Q86UU1 1377 aa31.55■■■□□ 2.64
FAM3A-202ENST00000359889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.55■■■□□ 2.64
FAM3A-202ENST00000359889 EPRSP07814 1512 aaKnown RBP31.55■■■□□ 2.64
FAM3A-202ENST00000359889 EHBP1L1Q8N3D4 1523 aa31.53■■■□□ 2.64
FAM3A-202ENST00000359889 LRRIQ1Q96JM4 1722 aa31.48■■■□□ 2.63
FAM3A-202ENST00000359889 RAPGEF6Q8TEU7 1601 aa31.48■■■□□ 2.63
FAM3A-202ENST00000359889 PRG4Q92954 1404 aaPredicted RBP31.47■■■□□ 2.63
FAM3A-202ENST00000359889 CDK11AQ9UQ88 783 aaPredicted RBP31.45■■■□□ 2.63
FAM3A-202ENST00000359889 NUP153P49790 1475 aaKnown RBP31.42■■■□□ 2.62
FAM3A-202ENST00000359889 NCOA2Q15596 1464 aa31.42■■■□□ 2.62
FAM3A-202ENST00000359889 SUPT6HQ7KZ85 1726 aaKnown RBP31.41■■■□□ 2.62
FAM3A-202ENST00000359889 CDK13Q14004 1512 aaKnown RBP31.41■■■□□ 2.62
FAM3A-202ENST00000359889 FAM50AQ14320 339 aaKnown RBP31.41■■■□□ 2.62
FAM3A-202ENST00000359889 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.4■■■□□ 2.62
FAM3A-202ENST00000359889 ARID3CA6NKF2 412 aa31.38■■■□□ 2.61
FAM3A-202ENST00000359889 PLB1Q6P1J6 1458 aa31.37■■■□□ 2.61
FAM3A-202ENST00000359889 PTPRGP23470 1445 aa31.35■■■□□ 2.61
FAM3A-202ENST00000359889 FGD6Q6ZV73 1430 aa31.35■■■□□ 2.61
FAM3A-202ENST00000359889 ITGAEP38570 1179 aa31.35■■■□□ 2.61
FAM3A-202ENST00000359889 MAGI3Q5TCQ9 1506 aa31.34■■■□□ 2.61
FAM3A-202ENST00000359889 MYOM3Q5VTT5 1437 aa31.34■■■□□ 2.61
FAM3A-202ENST00000359889 SHROOM2Q13796 1616 aa31.34■■■□□ 2.61
FAM3A-202ENST00000359889 ARHGEF11O15085 1522 aa31.3■■■□□ 2.6
FAM3A-202ENST00000359889 ABCA8O94911 1581 aa31.28■■■□□ 2.6
FAM3A-202ENST00000359889 CLASP1Q7Z460 1538 aa31.27■■■□□ 2.6
FAM3A-202ENST00000359889 TROQ12816 1431 aaPredicted RBP31.21■■■□□ 2.59
FAM3A-202ENST00000359889 MIA2Q96PC5 1412 aa31.18■■■□□ 2.58
FAM3A-202ENST00000359889 PLEKHD1A6NEE1 506 aa31.16■■■□□ 2.58
FAM3A-202ENST00000359889 UACAQ9BZF9 1416 aa31.16■■■□□ 2.58
FAM3A-202ENST00000359889 ATP10BO94823 1461 aa31.13■■■□□ 2.57
FAM3A-202ENST00000359889 SETD5Q9C0A6 1442 aa31.12■■■□□ 2.57
FAM3A-202ENST00000359889 PTPN23Q9H3S7 1636 aa31.11■■■□□ 2.57
FAM3A-202ENST00000359889 TCOF1Q13428 1488 aaKnown RBP31.1■■■□□ 2.57
FAM3A-202ENST00000359889 CLSPNQ9HAW4 1339 aa31.07■■■□□ 2.56
FAM3A-202ENST00000359889 ERCC6L2Q5T890 1561 aa31.06■■■□□ 2.56
FAM3A-202ENST00000359889 RAB3GAP2Q9H2M9 1393 aa31.05■■■□□ 2.56
FAM3A-202ENST00000359889 OSCARQ8IYS5 282 aa31.04■■■□□ 2.56
FAM3A-202ENST00000359889 DHX57Q6P158 1386 aaKnown RBP31.02■■■□□ 2.56
FAM3A-202ENST00000359889 ADCY10Q96PN6 1610 aa31.01■■■□□ 2.56
FAM3A-202ENST00000359889 ABCC2Q92887 1545 aa31■■■□□ 2.55
FAM3A-202ENST00000359889 KIF14Q15058 1648 aa30.96■■■□□ 2.55
FAM3A-202ENST00000359889 CFDP1Q9UEE9 299 aaPredicted RBP30.95■■■□□ 2.54
FAM3A-202ENST00000359889 UHRF1BP1LA0JNW5 1464 aa30.94■■■□□ 2.54
FAM3A-202ENST00000359889 ITSN2Q9NZM3 1697 aa30.92■■■□□ 2.54
FAM3A-202ENST00000359889 HFM1A2PYH4 1435 aa30.92■■■□□ 2.54
FAM3A-202ENST00000359889 PTPRKQ15262 1439 aa30.92■■■□□ 2.54
FAM3A-202ENST00000359889 GPATCH8Q9UKJ3 1502 aaKnown RBP30.92■■■□□ 2.54
FAM3A-202ENST00000359889 ABCC10Q5T3U5 1492 aa30.85■■■□□ 2.53
FAM3A-202ENST00000359889 AKNAQ7Z591 1439 aa30.83■■■□□ 2.53
FAM3A-202ENST00000359889 DAPK1P53355 1430 aa30.8■■■□□ 2.52
FAM3A-202ENST00000359889 NAIPQ13075 1403 aa30.8■■■□□ 2.52
FAM3A-202ENST00000359889 ZNF644Q9H582 1327 aaPredicted RBP30.8■■■□□ 2.52
FAM3A-202ENST00000359889 CAMSAP2Q08AD1 1489 aa30.8■■■□□ 2.52
FAM3A-202ENST00000359889 KDM5BQ9UGL1 1544 aa30.79■■■□□ 2.52
FAM3A-202ENST00000359889 CHIC2Q9UKJ5 165 aa30.79■■■□□ 2.52
FAM3A-202ENST00000359889 ZNF777Q9ULD5 760 aaPredicted RBP30.79■■■□□ 2.52
FAM3A-202ENST00000359889 DNMT1P26358 1616 aaKnown RBP30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms