RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 HIRIP3Q9BW71 556 aaPredicted RBP15.59■□□□□ 0.09
SEPSECS-201ENST00000358971 WASHC2CQ9Y4E1 1318 aa15.59■□□□□ 0.09
SEPSECS-201ENST00000358971 USP35Q9P2H5 1018 aa15.57■□□□□ 0.08
SEPSECS-201ENST00000358971 DAXXQ9UER7 740 aaPredicted RBP15.57■□□□□ 0.08
SEPSECS-201ENST00000358971 NACADO15069 1562 aa15.57■□□□□ 0.08
SEPSECS-201ENST00000358971 NPM2Q86SE8 214 aaKnown RBP15.54■□□□□ 0.08
SEPSECS-201ENST00000358971 SOGA1O94964 1423 aa15.53■□□□□ 0.08
SEPSECS-201ENST00000358971 ABCC8Q09428 1581 aa15.52■□□□□ 0.08
SEPSECS-201ENST00000358971 CCDC88BA6NC98 1476 aa15.51■□□□□ 0.07
SEPSECS-201ENST00000358971 GSE1Q14687 1217 aa15.49■□□□□ 0.07
SEPSECS-201ENST00000358971 RANGAP1P46060 587 aaPredicted RBP15.48■□□□□ 0.07
SEPSECS-201ENST00000358971 PPM1GO15355 546 aaPredicted RBP15.47■□□□□ 0.07
SEPSECS-201ENST00000358971 GOLGA3Q08378 1498 aa15.46■□□□□ 0.07
SEPSECS-201ENST00000358971 EEA1Q15075 1411 aa15.46■□□□□ 0.06
SEPSECS-201ENST00000358971 CLIP1P30622 1438 aa15.44■□□□□ 0.06
SEPSECS-201ENST00000358971 SIN3AQ96ST3 1273 aa15.44■□□□□ 0.06
SEPSECS-201ENST00000358971 VPS8Q8N3P4 1428 aa15.43■□□□□ 0.06
SEPSECS-201ENST00000358971 FAM43AQ8N2R8 423 aa15.41■□□□□ 0.06
SEPSECS-201ENST00000358971 FRAT1Q92837 279 aaPredicted RBP15.4■□□□□ 0.06
SEPSECS-201ENST00000358971 WDR97A6NE52 1622 aa15.4■□□□□ 0.06
SEPSECS-201ENST00000358971 RUSC2Q8N2Y8 1516 aa15.4■□□□□ 0.06
SEPSECS-201ENST00000358971 HSP90AA2PQ14568 343 aaPredicted RBP15.35■□□□□ 0.05
SEPSECS-201ENST00000358971 A0A0U1RQG5 324 aaPredicted RBP15.35■□□□□ 0.05
SEPSECS-201ENST00000358971 BAZ1BQ9UIG0 1483 aaKnown RBP15.33■□□□□ 0.05
SEPSECS-201ENST00000358971 FAM9BQ8IZU0 186 aa15.32■□□□□ 0.04
SEPSECS-201ENST00000358971 NFKBIBQ15653 356 aa15.31■□□□□ 0.04
SEPSECS-201ENST00000358971 SCRIBQ14160 1630 aa15.31■□□□□ 0.04
SEPSECS-201ENST00000358971 NAP1L5Q96NT1 182 aaPredicted RBP15.28■□□□□ 0.04
SEPSECS-201ENST00000358971 RAB3GAP2Q9H2M9 1393 aa15.27■□□□□ 0.03
SEPSECS-201ENST00000358971 DCAF11Q8TEB1 546 aa15.26■□□□□ 0.03
SEPSECS-201ENST00000358971 MAPKBP1O60336 1514 aa15.26■□□□□ 0.03
SEPSECS-201ENST00000358971 KANK4Q5T7N3 995 aaPredicted RBP15.26■□□□□ 0.03
SEPSECS-201ENST00000358971 HSP90AA1P07900 732 aaKnown RBP15.25■□□□□ 0.03
SEPSECS-201ENST00000358971 CEP164Q9UPV0 1460 aa15.25■□□□□ 0.03
SEPSECS-201ENST00000358971 RRP9O43818 475 aaKnown RBP15.25■□□□□ 0.03
SEPSECS-201ENST00000358971 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
SEPSECS-201ENST00000358971 PDE4AP27815 886 aa15.24■□□□□ 0.03
SEPSECS-201ENST00000358971 CECR2Q9BXF3 1484 aa15.24■□□□□ 0.03
SEPSECS-201ENST00000358971 MROH2BQ7Z745 1585 aa15.23■□□□□ 0.03
SEPSECS-201ENST00000358971 ZBED9Q6R2W3 1325 aa15.22■□□□□ 0.03
SEPSECS-201ENST00000358971 CCDC184Q52MB2 194 aa15.22■□□□□ 0.03
SEPSECS-201ENST00000358971 RBM10P98175 930 aaKnown RBP15.22■□□□□ 0.03
SEPSECS-201ENST00000358971 WIZO95785 1651 aa15.21■□□□□ 0.03
SEPSECS-201ENST00000358971 CUX2O14529 1486 aa15.2■□□□□ 0.02
SEPSECS-201ENST00000358971 RRAGDQ9NQL2 400 aaPredicted RBP15.2■□□□□ 0.02
SEPSECS-201ENST00000358971 DDRGK1Q96HY6 314 aa15.2■□□□□ 0.02
SEPSECS-201ENST00000358971 AKNAQ7Z591 1439 aa15.2■□□□□ 0.02
SEPSECS-201ENST00000358971 CCNB3Q8WWL7 1395 aa15.19■□□□□ 0.02
SEPSECS-201ENST00000358971 MRS2Q9HD23 443 aa15.19■□□□□ 0.02
SEPSECS-201ENST00000358971 TCERG1O14776 1098 aaKnown RBP15.19■□□□□ 0.02
SEPSECS-201ENST00000358971 SLC4A3P48751 1232 aa15.19■□□□□ 0.02
SEPSECS-201ENST00000358971 RRBP1Q9P2E9 1410 aaKnown RBP15.18■□□□□ 0.02
SEPSECS-201ENST00000358971 BACH2Q9BYV9 841 aa15.17■□□□□ 0.02
SEPSECS-201ENST00000358971 PNNQ9H307 717 aaKnown RBP15.17■□□□□ 0.02
SEPSECS-201ENST00000358971 KIF21BO75037 1637 aa15.15■□□□□ 0.02
SEPSECS-201ENST00000358971 FRAT2O75474 233 aaPredicted RBP15.14■□□□□ 0.01
SEPSECS-201ENST00000358971 AAMPQ13685 434 aa15.14■□□□□ 0.01
SEPSECS-201ENST00000358971 FGD1P98174 961 aa15.12■□□□□ 0.01
SEPSECS-201ENST00000358971 PDE4CQ08493 712 aa15.11■□□□□ 0.01
SEPSECS-201ENST00000358971 NCAPD3P42695 1498 aa15.11■□□□□ 0.01
SEPSECS-201ENST00000358971 SETD5Q9C0A6 1442 aa15.1■□□□□ 0.01
SEPSECS-201ENST00000358971 TONSLQ96HA7 1378 aa15.1■□□□□ 0.01
SEPSECS-201ENST00000358971 NUDCQ9Y266 331 aa15.09■□□□□ 0.01
SEPSECS-201ENST00000358971 ARID4BQ4LE39 1312 aaPredicted RBP15.07■□□□□ 0
SEPSECS-201ENST00000358971 SENP3-EIF4A1A0A087X0R7 540 aa15.07■□□□□ 0
SEPSECS-201ENST00000358971 MS4A1P11836 297 aa15.07■□□□□ 0
SEPSECS-201ENST00000358971 SMARCA2P51531 1590 aa15.06■□□□□ 0
SEPSECS-201ENST00000358971 SMG6Q86US8 1419 aaKnown RBP15.06■□□□□ 0
SEPSECS-201ENST00000358971 ARXQ96QS3 562 aa15.06■□□□□ 0
SEPSECS-201ENST00000358971 PRKRIP1Q9H875 184 aaPredicted RBP15.05■□□□□ -0
SEPSECS-201ENST00000358971 RNF123Q5XPI4 1314 aa15.04■□□□□ -0
SEPSECS-201ENST00000358971 BAZ1AQ9NRL2 1556 aaPredicted RBP15.04■□□□□ -0
SEPSECS-201ENST00000358971 RAPGEF2Q9Y4G8 1499 aa15.04■□□□□ -0
SEPSECS-201ENST00000358971 PEG3Q9GZU2 1588 aa15.03■□□□□ -0
SEPSECS-201ENST00000358971 L1TD1Q5T7N2 865 aaKnown RBP15.02■□□□□ -0
SEPSECS-201ENST00000358971 EXOC6Q8TAG9 804 aa15.01□□□□□ -0.01
SEPSECS-201ENST00000358971 POGKQ9P215 609 aa15□□□□□ -0.01
SEPSECS-201ENST00000358971 CNGB1Q14028 1251 aaPredicted RBP15□□□□□ -0.01
SEPSECS-201ENST00000358971 FAM50AQ14320 339 aaKnown RBP15□□□□□ -0.01
SEPSECS-201ENST00000358971 CLCN1P35523 988 aa15□□□□□ -0.01
SEPSECS-201ENST00000358971 RGS3P49796 1198 aa15□□□□□ -0.01
SEPSECS-201ENST00000358971 HSPA5P11021 654 aaKnown RBP14.98□□□□□ -0.01
SEPSECS-201ENST00000358971 SKAP1Q86WV1 359 aa14.96□□□□□ -0.01
SEPSECS-201ENST00000358971 CNTLNQ9NXG0 1405 aa14.95□□□□□ -0.02
SEPSECS-201ENST00000358971 CALD1Q05682 793 aaKnown RBP14.95□□□□□ -0.02
SEPSECS-201ENST00000358971 PDCL3Q9H2J4 239 aa14.94□□□□□ -0.02
SEPSECS-201ENST00000358971 BCL11BQ9C0K0 894 aaPredicted RBP14.94□□□□□ -0.02
SEPSECS-201ENST00000358971 PRDM4Q9UKN5 801 aa14.94□□□□□ -0.02
SEPSECS-201ENST00000358971 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
SEPSECS-201ENST00000358971 FHAD1B1AJZ9 1412 aa14.92□□□□□ -0.02
SEPSECS-201ENST00000358971 PDIA4P13667 645 aaKnown RBP14.92□□□□□ -0.02
SEPSECS-201ENST00000358971 RRP1P56182 461 aaKnown RBP14.91□□□□□ -0.02
SEPSECS-201ENST00000358971 EIF4G2P78344 907 aaKnown RBP eCLIP14.9□□□□□ -0.02
SEPSECS-201ENST00000358971 XRCC6P12956 609 aaKnown RBP eCLIP14.88□□□□□ -0.03
SEPSECS-201ENST00000358971 GOLGA6L3A6NEY3 463 aa14.87□□□□□ -0.03
SEPSECS-201ENST00000358971 CENPJQ9HC77 1338 aaPredicted RBP14.86□□□□□ -0.03
SEPSECS-201ENST00000358971 PANK2Q9BZ23 570 aa14.86□□□□□ -0.03
SEPSECS-201ENST00000358971 TPM2P07951 284 aa14.85□□□□□ -0.03
SEPSECS-201ENST00000358971 RCAN3Q9UKA8 241 aa14.83□□□□□ -0.04
SEPSECS-201ENST00000358971 TOP2AP11388 1531 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms