RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 ADAMTS12P58397 1594 aa18.71■□□□□ 0.59
SYN3-202ENST00000358763 CTTNBP2Q8WZ74 1663 aa18.7■□□□□ 0.58
SYN3-202ENST00000358763 FHAD1B1AJZ9 1412 aa18.69■□□□□ 0.58
SYN3-202ENST00000358763 SNAPC4Q5SXM2 1469 aa18.66■□□□□ 0.58
SYN3-202ENST00000358763 P3H3Q8IVL6 736 aa18.63■□□□□ 0.57
SYN3-202ENST00000358763 APLP2Q06481 763 aa18.59■□□□□ 0.57
SYN3-202ENST00000358763 FHOD3Q2V2M9 1422 aa18.57■□□□□ 0.56
SYN3-202ENST00000358763 MAGI1Q96QZ7 1491 aaPredicted RBP18.56■□□□□ 0.56
SYN3-202ENST00000358763 EFCAB5A4FU69 1503 aa18.55■□□□□ 0.56
SYN3-202ENST00000358763 GRIN2AQ12879 1464 aa18.54■□□□□ 0.56
SYN3-202ENST00000358763 FBLN2P98095 1184 aa18.53■□□□□ 0.56
SYN3-202ENST00000358763 IQGAP2Q13576 1575 aa18.51■□□□□ 0.55
SYN3-202ENST00000358763 SYNJ2O15056 1496 aa18.51■□□□□ 0.55
SYN3-202ENST00000358763 CHMP7Q8WUX9 453 aaPredicted RBP18.51■□□□□ 0.55
SYN3-202ENST00000358763 SAMD9Q5K651 1589 aa18.5■□□□□ 0.55
SYN3-202ENST00000358763 PCF11O94913 1555 aaKnown RBP18.47■□□□□ 0.55
SYN3-202ENST00000358763 KANK4Q5T7N3 995 aaPredicted RBP18.45■□□□□ 0.54
SYN3-202ENST00000358763 ATP1B4Q9UN42 357 aaPredicted RBP18.45■□□□□ 0.54
SYN3-202ENST00000358763 CEP170Q5SW79 1584 aa18.44■□□□□ 0.54
SYN3-202ENST00000358763 KIAA0586Q9BVV6 1533 aa18.43■□□□□ 0.54
SYN3-202ENST00000358763 FMN1Q68DA7 1419 aa18.41■□□□□ 0.54
SYN3-202ENST00000358763 TIAM1Q13009 1591 aa18.39■□□□□ 0.53
SYN3-202ENST00000358763 UGGT2Q9NYU1 1516 aa18.39■□□□□ 0.53
SYN3-202ENST00000358763 FYCO1Q9BQS8 1478 aa18.38■□□□□ 0.53
SYN3-202ENST00000358763 CASKIN1Q8WXD9 1431 aa18.38■□□□□ 0.53
SYN3-202ENST00000358763 NUP160Q12769 1436 aa18.37■□□□□ 0.53
SYN3-202ENST00000358763 CFAP43Q8NDM7 1665 aa18.34■□□□□ 0.53
SYN3-202ENST00000358763 CHD1O14646 1710 aa18.34■□□□□ 0.53
SYN3-202ENST00000358763 MAP3K1Q13233 1512 aa18.33■□□□□ 0.53
SYN3-202ENST00000358763 DISP1Q96F81 1524 aa18.33■□□□□ 0.53
SYN3-202ENST00000358763 KIAA0556O60303 1618 aa18.33■□□□□ 0.52
SYN3-202ENST00000358763 LRRC9Q6ZRR7 1453 aa18.3■□□□□ 0.52
SYN3-202ENST00000358763 HRCP23327 699 aa18.3■□□□□ 0.52
SYN3-202ENST00000358763 LRRIQ1Q96JM4 1722 aa18.28■□□□□ 0.52
SYN3-202ENST00000358763 JPH4Q96JJ6 628 aa18.27■□□□□ 0.52
SYN3-202ENST00000358763 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
SYN3-202ENST00000358763 ARID3CA6NKF2 412 aa18.23■□□□□ 0.51
SYN3-202ENST00000358763 HECW1Q76N89 1606 aa18.22■□□□□ 0.51
SYN3-202ENST00000358763 CARMIL2Q6F5E8 1435 aa18.21■□□□□ 0.51
SYN3-202ENST00000358763 MTUS2Q5JR59 1369 aa18.19■□□□□ 0.5
SYN3-202ENST00000358763 PHLDB1Q86UU1 1377 aa18.18■□□□□ 0.5
SYN3-202ENST00000358763 RRBP1Q9P2E9 1410 aaKnown RBP18.18■□□□□ 0.5
SYN3-202ENST00000358763 CDK13Q14004 1512 aaKnown RBP18.18■□□□□ 0.5
SYN3-202ENST00000358763 EPRSP07814 1512 aaKnown RBP18.17■□□□□ 0.5
SYN3-202ENST00000358763 CCDC18Q5T9S5 1454 aa18.17■□□□□ 0.5
SYN3-202ENST00000358763 PRG4Q92954 1404 aaPredicted RBP18.16■□□□□ 0.5
SYN3-202ENST00000358763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.16■□□□□ 0.5
SYN3-202ENST00000358763 RAPGEF6Q8TEU7 1601 aa18.15■□□□□ 0.5
SYN3-202ENST00000358763 CCNB3Q8WWL7 1395 aa18.15■□□□□ 0.5
SYN3-202ENST00000358763 PLB1Q6P1J6 1458 aa18.14■□□□□ 0.49
SYN3-202ENST00000358763 MAGI3Q5TCQ9 1506 aa18.14■□□□□ 0.49
SYN3-202ENST00000358763 NUP153P49790 1475 aaKnown RBP18.13■□□□□ 0.49
SYN3-202ENST00000358763 EHBP1L1Q8N3D4 1523 aa18.11■□□□□ 0.49
SYN3-202ENST00000358763 SHROOM2Q13796 1616 aa18.1■□□□□ 0.49
SYN3-202ENST00000358763 ITGAEP38570 1179 aa18.09■□□□□ 0.49
SYN3-202ENST00000358763 NCOA2Q15596 1464 aa18.08■□□□□ 0.48
SYN3-202ENST00000358763 CLASP1Q7Z460 1538 aa18.08■□□□□ 0.48
SYN3-202ENST00000358763 SUPT6HQ7KZ85 1726 aaKnown RBP18.07■□□□□ 0.48
SYN3-202ENST00000358763 ERCC6L2Q5T890 1561 aa18.07■□□□□ 0.48
SYN3-202ENST00000358763 CCER1Q8TC90 406 aaPredicted RBP18.07■□□□□ 0.48
SYN3-202ENST00000358763 FAM50AQ14320 339 aaKnown RBP18.06■□□□□ 0.48
SYN3-202ENST00000358763 PTPRGP23470 1445 aa18.04■□□□□ 0.48
SYN3-202ENST00000358763 ABCA8O94911 1581 aa18.04■□□□□ 0.48
SYN3-202ENST00000358763 FGD6Q6ZV73 1430 aa18.02■□□□□ 0.47
SYN3-202ENST00000358763 ARHGEF11O15085 1522 aa18■□□□□ 0.47
SYN3-202ENST00000358763 MYOM3Q5VTT5 1437 aa18■□□□□ 0.47
SYN3-202ENST00000358763 CDK11AQ9UQ88 783 aaPredicted RBP17.97■□□□□ 0.47
SYN3-202ENST00000358763 ZEB1P37275 1124 aaPredicted RBP17.97■□□□□ 0.47
SYN3-202ENST00000358763 ATP10BO94823 1461 aa17.95■□□□□ 0.46
SYN3-202ENST00000358763 TROQ12816 1431 aaPredicted RBP17.94■□□□□ 0.46
SYN3-202ENST00000358763 UACAQ9BZF9 1416 aa17.93■□□□□ 0.46
SYN3-202ENST00000358763 PTPN23Q9H3S7 1636 aa17.92■□□□□ 0.46
SYN3-202ENST00000358763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.91■□□□□ 0.463e-8■■■■■ 139.7
SYN3-202ENST00000358763 KIF14Q15058 1648 aa17.9■□□□□ 0.46
SYN3-202ENST00000358763 OSCARQ8IYS5 282 aa17.89■□□□□ 0.45
SYN3-202ENST00000358763 PLEKHD1A6NEE1 506 aa17.87■□□□□ 0.45
SYN3-202ENST00000358763 ABCC2Q92887 1545 aa17.87■□□□□ 0.45
SYN3-202ENST00000358763 ADCY10Q96PN6 1610 aa17.86■□□□□ 0.45
SYN3-202ENST00000358763 PTPRKQ15262 1439 aa17.84■□□□□ 0.45
SYN3-202ENST00000358763 MIA2Q96PC5 1412 aa17.84■□□□□ 0.45
SYN3-202ENST00000358763 TCOF1Q13428 1488 aaKnown RBP17.84■□□□□ 0.45
SYN3-202ENST00000358763 RAB3GAP2Q9H2M9 1393 aa17.84■□□□□ 0.45
SYN3-202ENST00000358763 SETD5Q9C0A6 1442 aa17.82■□□□□ 0.44
SYN3-202ENST00000358763 ZNF644Q9H582 1327 aaPredicted RBP17.8■□□□□ 0.44
SYN3-202ENST00000358763 DHX57Q6P158 1386 aaKnown RBP17.8■□□□□ 0.44
SYN3-202ENST00000358763 GPATCH8Q9UKJ3 1502 aaKnown RBP17.8■□□□□ 0.44
SYN3-202ENST00000358763 ITSN2Q9NZM3 1697 aa17.79■□□□□ 0.44
SYN3-202ENST00000358763 CFDP1Q9UEE9 299 aaPredicted RBP17.78■□□□□ 0.44
SYN3-202ENST00000358763 ABCC10Q5T3U5 1492 aa17.78■□□□□ 0.44
SYN3-202ENST00000358763 ZCCHC11Q5TAX3 1644 aaKnown RBP17.77■□□□□ 0.44
SYN3-202ENST00000358763 CHIC2Q9UKJ5 165 aa17.77■□□□□ 0.43
SYN3-202ENST00000358763 UHRF1BP1LA0JNW5 1464 aa17.77■□□□□ 0.43
SYN3-202ENST00000358763 ZNF777Q9ULD5 760 aaPredicted RBP17.76■□□□□ 0.43
SYN3-202ENST00000358763 CDC42BPAQ5VT25 1732 aa17.75■□□□□ 0.43
SYN3-202ENST00000358763 CAMSAP2Q08AD1 1489 aa17.74■□□□□ 0.43
SYN3-202ENST00000358763 KDM5BQ9UGL1 1544 aa17.73■□□□□ 0.43
SYN3-202ENST00000358763 HFM1A2PYH4 1435 aa17.72■□□□□ 0.43
SYN3-202ENST00000358763 RRP7BPQ9NSQ0 103 aa17.72■□□□□ 0.43
SYN3-202ENST00000358763 DAPK1P53355 1430 aa17.71■□□□□ 0.43
SYN3-202ENST00000358763 KCNH8Q96L42 1107 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms