RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 TMC1Q8TDI8 760 aa19.86■□□□□ 0.77
SLC6A20-202ENST00000358525 NPM2Q86SE8 214 aaKnown RBP19.86■□□□□ 0.77
SLC6A20-202ENST00000358525 SIN3AQ96ST3 1273 aa19.85■□□□□ 0.77
SLC6A20-202ENST00000358525 CUX2O14529 1486 aa19.83■□□□□ 0.77
SLC6A20-202ENST00000358525 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.77
SLC6A20-202ENST00000358525 IRX6P78412 446 aaPredicted RBP19.83■□□□□ 0.76
SLC6A20-202ENST00000358525 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.76
SLC6A20-202ENST00000358525 VPS8Q8N3P4 1428 aa19.83■□□□□ 0.76
SLC6A20-202ENST00000358525 BCL11AQ9H165 835 aa19.81■□□□□ 0.76
SLC6A20-202ENST00000358525 CARMIL1Q5VZK9 1371 aa19.81■□□□□ 0.76
SLC6A20-202ENST00000358525 NEFMP07197 916 aa19.79■□□□□ 0.76
SLC6A20-202ENST00000358525 ZBTB47Q9UFB7 747 aaPredicted RBP19.78■□□□□ 0.76
SLC6A20-202ENST00000358525 KANK4Q5T7N3 995 aaPredicted RBP19.76■□□□□ 0.75
SLC6A20-202ENST00000358525 PLEKHD1A6NEE1 506 aa19.74■□□□□ 0.75
SLC6A20-202ENST00000358525 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
SLC6A20-202ENST00000358525 FHAD1B1AJZ9 1412 aa19.74■□□□□ 0.75
SLC6A20-202ENST00000358525 CCDC136Q96JN2 1154 aa19.73■□□□□ 0.75
SLC6A20-202ENST00000358525 NPM1P06748 294 aaKnown RBP eCLIP19.73■□□□□ 0.75
SLC6A20-202ENST00000358525 CFDP1Q9UEE9 299 aaPredicted RBP19.72■□□□□ 0.75
SLC6A20-202ENST00000358525 SLC24A1O60721 1099 aa19.71■□□□□ 0.75
SLC6A20-202ENST00000358525 KCNH8Q96L42 1107 aa19.7■□□□□ 0.74
SLC6A20-202ENST00000358525 STAG3Q9UJ98 1225 aa19.67■□□□□ 0.74
SLC6A20-202ENST00000358525 WDR43Q15061 677 aaKnown RBP eCLIP19.66■□□□□ 0.74
SLC6A20-202ENST00000358525 RGL3Q3MIN7 710 aa19.65■□□□□ 0.74
SLC6A20-202ENST00000358525 EIF4G1Q04637 1599 aaKnown RBP19.64■□□□□ 0.74
SLC6A20-202ENST00000358525 SENP3-EIF4A1A0A087X0R7 540 aa19.63■□□□□ 0.73
SLC6A20-202ENST00000358525 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
SLC6A20-202ENST00000358525 ESF1Q9H501 851 aaKnown RBP19.62■□□□□ 0.73
SLC6A20-202ENST00000358525 SETD5Q9C0A6 1442 aa19.61■□□□□ 0.73
SLC6A20-202ENST00000358525 RUSC2Q8N2Y8 1516 aa19.6■□□□□ 0.73
SLC6A20-202ENST00000358525 SUPT16HQ9Y5B9 1047 aaKnown RBP19.57■□□□□ 0.72
SLC6A20-202ENST00000358525 RAPGEF2Q9Y4G8 1499 aa19.57■□□□□ 0.72
SLC6A20-202ENST00000358525 ARHGAP35Q9NRY4 1499 aa19.57■□□□□ 0.72
SLC6A20-202ENST00000358525 CARD11Q9BXL7 1154 aa19.56■□□□□ 0.72
SLC6A20-202ENST00000358525 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.54■□□□□ 0.72
SLC6A20-202ENST00000358525 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
SLC6A20-202ENST00000358525 RAB3GAP2Q9H2M9 1393 aa19.53■□□□□ 0.72
SLC6A20-202ENST00000358525 ERCC6Q03468 1493 aa19.53■□□□□ 0.72
SLC6A20-202ENST00000358525 PLPPR3Q6T4P5 718 aa19.51■□□□□ 0.71
SLC6A20-202ENST00000358525 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
SLC6A20-202ENST00000358525 TIMELESSQ9UNS1 1208 aa19.5■□□□□ 0.71
SLC6A20-202ENST00000358525 NBR1Q14596 966 aa19.5■□□□□ 0.71
SLC6A20-202ENST00000358525 TDRD9Q8NDG6 1382 aaKnown RBP19.48■□□□□ 0.71
SLC6A20-202ENST00000358525 UPF2Q9HAU5 1272 aaKnown RBP19.45■□□□□ 0.7
SLC6A20-202ENST00000358525 FOXD1Q16676 465 aa19.42■□□□□ 0.7
SLC6A20-202ENST00000358525 CADPSQ9ULU8 1353 aa19.42■□□□□ 0.7
SLC6A20-202ENST00000358525 FMN1Q68DA7 1419 aa19.41■□□□□ 0.7
SLC6A20-202ENST00000358525 HSPA5P11021 654 aaKnown RBP19.41■□□□□ 0.7
SLC6A20-202ENST00000358525 FHOD3Q2V2M9 1422 aa19.4■□□□□ 0.7
SLC6A20-202ENST00000358525 KNSTRNQ9Y448 316 aa19.4■□□□□ 0.7
SLC6A20-202ENST00000358525 PDS5BQ9NTI5 1447 aa19.38■□□□□ 0.69
SLC6A20-202ENST00000358525 CCER2I3L3R5 266 aa19.37■□□□□ 0.69
SLC6A20-202ENST00000358525 DCAF11Q8TEB1 546 aa19.37■□□□□ 0.69
SLC6A20-202ENST00000358525 HSP90AA1P07900 732 aaKnown RBP19.37■□□□□ 0.69
SLC6A20-202ENST00000358525 CDCA8Q53HL2 280 aa19.34■□□□□ 0.69
SLC6A20-202ENST00000358525 PPP4R2Q9NY27 417 aa19.33■□□□□ 0.69
SLC6A20-202ENST00000358525 CC2D1BQ5T0F9 858 aaKnown RBP19.33■□□□□ 0.68
SLC6A20-202ENST00000358525 MPHOSPH9Q99550 1183 aa19.31■□□□□ 0.68
SLC6A20-202ENST00000358525 DHX57Q6P158 1386 aaKnown RBP19.31■□□□□ 0.68
SLC6A20-202ENST00000358525 PPP1R15AO75807 674 aaPredicted RBP19.3■□□□□ 0.68
SLC6A20-202ENST00000358525 PKD2Q13563 968 aa19.3■□□□□ 0.68
SLC6A20-202ENST00000358525 B4GALNT3Q6L9W6 998 aa19.26■□□□□ 0.67
SLC6A20-202ENST00000358525 ANP32EQ9BTT0 268 aa19.24■□□□□ 0.67
SLC6A20-202ENST00000358525 CFAP53Q96M91 514 aa19.23■□□□□ 0.67
SLC6A20-202ENST00000358525 NEUROD2Q15784 382 aa19.23■□□□□ 0.67
SLC6A20-202ENST00000358525 CARMIL2Q6F5E8 1435 aa19.22■□□□□ 0.67
SLC6A20-202ENST00000358525 TMF1P82094 1093 aa19.21■□□□□ 0.67
SLC6A20-202ENST00000358525 FANCD2Q9BXW9 1451 aa19.2■□□□□ 0.66
SLC6A20-202ENST00000358525 TNNT2P45379 298 aaPredicted RBP19.19■□□□□ 0.66
SLC6A20-202ENST00000358525 L3MBTL2Q969R5 705 aa19.18■□□□□ 0.66
SLC6A20-202ENST00000358525 ARXQ96QS3 562 aa19.18■□□□□ 0.66
SLC6A20-202ENST00000358525 NUP155O75694 1391 aa19.17■□□□□ 0.66
SLC6A20-202ENST00000358525 DDRGK1Q96HY6 314 aa19.17■□□□□ 0.66
SLC6A20-202ENST00000358525 PPM1GO15355 546 aaPredicted RBP19.16■□□□□ 0.66
SLC6A20-202ENST00000358525 MYH16Q9H6N6 1097 aa19.15■□□□□ 0.66
SLC6A20-202ENST00000358525 ANP32BQ92688 251 aaKnown RBP19.15■□□□□ 0.66
SLC6A20-202ENST00000358525 ANKRD30AQ9BXX3 1397 aa19.15■□□□□ 0.66
SLC6A20-202ENST00000358525 IGF1RP08069 1367 aa19.13■□□□□ 0.65
SLC6A20-202ENST00000358525 KIF21BO75037 1637 aa19.13■□□□□ 0.65
SLC6A20-202ENST00000358525 KANK1Q14678 1352 aa19.12■□□□□ 0.65
SLC6A20-202ENST00000358525 FGD5Q6ZNL6 1462 aa19.11■□□□□ 0.65
SLC6A20-202ENST00000358525 CCDC18Q5T9S5 1454 aa19.1■□□□□ 0.65
SLC6A20-202ENST00000358525 ROCK2O75116 1388 aaKnown RBP19.1■□□□□ 0.65
SLC6A20-202ENST00000358525 RGS3P49796 1198 aa19.09■□□□□ 0.65
SLC6A20-202ENST00000358525 FRAT1Q92837 279 aaPredicted RBP19.09■□□□□ 0.65
SLC6A20-202ENST00000358525 POGKQ9P215 609 aa19.09■□□□□ 0.65
SLC6A20-202ENST00000358525 FTSJ3Q8IY81 847 aaKnown RBP19.09■□□□□ 0.65
SLC6A20-202ENST00000358525 EIF5BO60841 1220 aaKnown RBP19.09■□□□□ 0.65
SLC6A20-202ENST00000358525 HNRNPMP52272 730 aaKnown RBP eCLIP19.09■□□□□ 0.65
SLC6A20-202ENST00000358525 BECN1Q14457 450 aa19.08■□□□□ 0.65
SLC6A20-202ENST00000358525 PLEKHG5O94827 1062 aa19.08■□□□□ 0.64
SLC6A20-202ENST00000358525 RBM19Q9Y4C8 960 aaKnown RBP19.07■□□□□ 0.64
SLC6A20-202ENST00000358525 KTN1Q86UP2 1357 aaKnown RBP19.07■□□□□ 0.64
SLC6A20-202ENST00000358525 MAPK8IP3Q9UPT6 1336 aa19.07■□□□□ 0.64
SLC6A20-202ENST00000358525 ZBTB7CA1YPR0 619 aa19.07■□□□□ 0.64
SLC6A20-202ENST00000358525 C14orf37Q86TY3 774 aa19.07■□□□□ 0.64
SLC6A20-202ENST00000358525 LAS1LQ9Y4W2 734 aaKnown RBP19.05■□□□□ 0.64
SLC6A20-202ENST00000358525 RAD54L2Q9Y4B4 1467 aa19.05■□□□□ 0.64
SLC6A20-202ENST00000358525 ARID4BQ4LE39 1312 aaPredicted RBP19.05■□□□□ 0.64
SLC6A20-202ENST00000358525 NUDCQ9Y266 331 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms