RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 NPM2Q86SE8 214 aaKnown RBP8.8□□□□□ -1
TRIM38-201ENST00000357085 MAP3K1Q13233 1512 aa8.8□□□□□ -1
TRIM38-201ENST00000357085 DDX10Q13206 875 aaKnown RBP8.8□□□□□ -1
TRIM38-201ENST00000357085 RSPH6AQ9H0K4 717 aa8.79□□□□□ -1
TRIM38-201ENST00000357085 ANO8Q9HCE9 1232 aaPredicted RBP8.79□□□□□ -1
TRIM38-201ENST00000357085 CUX1P39880 1505 aa8.79□□□□□ -1
TRIM38-201ENST00000357085 CCDC136Q96JN2 1154 aa8.79□□□□□ -1
TRIM38-201ENST00000357085 UBE2Q2Q8WVN8 375 aa8.78□□□□□ -1
TRIM38-201ENST00000357085 MROH2BQ7Z745 1585 aa8.78□□□□□ -1
TRIM38-201ENST00000357085 EIF4G1Q04637 1599 aaKnown RBP8.77□□□□□ -1.01
TRIM38-201ENST00000357085 SETD5Q9C0A6 1442 aa8.77□□□□□ -1.01
TRIM38-201ENST00000357085 ANP32BQ92688 251 aaKnown RBP8.76□□□□□ -1.01
TRIM38-201ENST00000357085 IRX6P78412 446 aaPredicted RBP8.75□□□□□ -1.01
TRIM38-201ENST00000357085 PKNOX2Q96KN3 472 aa8.75□□□□□ -1.01
TRIM38-201ENST00000357085 ARHGAP35Q9NRY4 1499 aa8.75□□□□□ -1.01
TRIM38-201ENST00000357085 CUX2O14529 1486 aa8.75□□□□□ -1.01
TRIM38-201ENST00000357085 NCLP19338 710 aaKnown RBP8.74□□□□□ -1.01
TRIM38-201ENST00000357085 ROCK2O75116 1388 aaKnown RBP8.74□□□□□ -1.01
TRIM38-201ENST00000357085 RRBP1Q9P2E9 1410 aaKnown RBP8.74□□□□□ -1.01
TRIM38-201ENST00000357085 UPF2Q9HAU5 1272 aaKnown RBP8.73□□□□□ -1.01
TRIM38-201ENST00000357085 IPO9Q96P70 1041 aaKnown RBP8.73□□□□□ -1.01
TRIM38-201ENST00000357085 SALL2Q9Y467 1007 aaPredicted RBP8.73□□□□□ -1.01
TRIM38-201ENST00000357085 BECN1Q14457 450 aa8.72□□□□□ -1.01
TRIM38-201ENST00000357085 CCDC88BA6NC98 1476 aa8.72□□□□□ -1.01
TRIM38-201ENST00000357085 ABCC8Q09428 1581 aa8.72□□□□□ -1.01
TRIM38-201ENST00000357085 KTN1Q86UP2 1357 aaKnown RBP8.72□□□□□ -1.01
TRIM38-201ENST00000357085 TOP2BQ02880 1626 aa8.71□□□□□ -1.01
TRIM38-201ENST00000357085 PRDM2Q13029 1718 aa8.71□□□□□ -1.02
TRIM38-201ENST00000357085 EFCAB5A4FU69 1503 aa8.71□□□□□ -1.02
TRIM38-201ENST00000357085 L1TD1Q5T7N2 865 aaKnown RBP8.71□□□□□ -1.02
TRIM38-201ENST00000357085 CCDC18Q5T9S5 1454 aa8.71□□□□□ -1.02
TRIM38-201ENST00000357085 KIF21AQ7Z4S6 1674 aa8.71□□□□□ -1.02
TRIM38-201ENST00000357085 PTMSP20962 102 aa8.7□□□□□ -1.02
TRIM38-201ENST00000357085 PHLDB1Q86UU1 1377 aa8.7□□□□□ -1.02
TRIM38-201ENST00000357085 DHX57Q6P158 1386 aaKnown RBP8.7□□□□□ -1.02
TRIM38-201ENST00000357085 PEG3Q9GZU2 1588 aa8.69□□□□□ -1.02
TRIM38-201ENST00000357085 LAS1LQ9Y4W2 734 aaKnown RBP8.69□□□□□ -1.02
TRIM38-201ENST00000357085 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.69□□□□□ -1.02
TRIM38-201ENST00000357085 FMN1Q68DA7 1419 aa8.68□□□□□ -1.02
TRIM38-201ENST00000357085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.67□□□□□ -1.02
TRIM38-201ENST00000357085 NAP1L5Q96NT1 182 aaPredicted RBP8.67□□□□□ -1.02
TRIM38-201ENST00000357085 ZBED9Q6R2W3 1325 aa8.67□□□□□ -1.02
TRIM38-201ENST00000357085 SYNJ1O43426 1573 aa8.66□□□□□ -1.02
TRIM38-201ENST00000357085 CFAP43Q8NDM7 1665 aa8.66□□□□□ -1.02
TRIM38-201ENST00000357085 MSH5O43196 834 aa8.66□□□□□ -1.02
TRIM38-201ENST00000357085 BIVM-ERCC5R4GMW8 1640 aa8.65□□□□□ -1.02
TRIM38-201ENST00000357085 FAM50AQ14320 339 aaKnown RBP8.65□□□□□ -1.02
TRIM38-201ENST00000357085 TCERG1O14776 1098 aaKnown RBP8.65□□□□□ -1.02
TRIM38-201ENST00000357085 HSP90AA1P07900 732 aaKnown RBP8.64□□□□□ -1.03
TRIM38-201ENST00000357085 EIF4G2P78344 907 aaKnown RBP eCLIP8.64□□□□□ -1.03
TRIM38-201ENST00000357085 THOC2Q8NI27 1593 aaKnown RBP8.64□□□□□ -1.03
TRIM38-201ENST00000357085 FYCO1Q9BQS8 1478 aa8.64□□□□□ -1.03
TRIM38-201ENST00000357085 SOGA1O94964 1423 aa8.63□□□□□ -1.03
TRIM38-201ENST00000357085 CECR2Q9BXF3 1484 aa8.63□□□□□ -1.03
TRIM38-201ENST00000357085 MS4A1P11836 297 aa8.63□□□□□ -1.03
TRIM38-201ENST00000357085 TIAM1Q13009 1591 aa8.63□□□□□ -1.03
TRIM38-201ENST00000357085 B4GALNT3Q6L9W6 998 aa8.63□□□□□ -1.03
TRIM38-201ENST00000357085 MRS2Q9HD23 443 aa8.63□□□□□ -1.03
TRIM38-201ENST00000357085 TNNT2P45379 298 aaPredicted RBP8.63□□□□□ -1.03
TRIM38-201ENST00000357085 FAM9BQ8IZU0 186 aa8.62□□□□□ -1.03
TRIM38-201ENST00000357085 SLC24A1O60721 1099 aa8.62□□□□□ -1.03
TRIM38-201ENST00000357085 TRIM44Q96DX7 344 aaPredicted RBP8.62□□□□□ -1.03
TRIM38-201ENST00000357085 ATP1B4Q9UN42 357 aaPredicted RBP8.61□□□□□ -1.03
TRIM38-201ENST00000357085 SUPT6HQ7KZ85 1726 aaKnown RBP8.61□□□□□ -1.03
TRIM38-201ENST00000357085 HSP90AA2PQ14568 343 aaPredicted RBP8.6□□□□□ -1.03
TRIM38-201ENST00000357085 PDE3BQ13370 1112 aa8.6□□□□□ -1.03
TRIM38-201ENST00000357085 GSE1Q14687 1217 aa8.6□□□□□ -1.03
TRIM38-201ENST00000357085 RAB3GAP2Q9H2M9 1393 aa8.6□□□□□ -1.03
TRIM38-201ENST00000357085 VSIG10Q8N0Z9 540 aa8.59□□□□□ -1.03
TRIM38-201ENST00000357085 IL27Q8NEV9 243 aa8.59□□□□□ -1.03
TRIM38-201ENST00000357085 MTUS2Q5JR59 1369 aa8.59□□□□□ -1.03
TRIM38-201ENST00000357085 PLEKHH2Q8IVE3 1493 aa8.59□□□□□ -1.03
TRIM38-201ENST00000357085 POLR3GLQ9BT43 218 aa8.59□□□□□ -1.03
TRIM38-201ENST00000357085 POLR1AO95602 1720 aaPredicted RBP8.59□□□□□ -1.03
TRIM38-201ENST00000357085 AQRO60306 1485 aaKnown RBP eCLIP8.58□□□□□ -1.045e-16■■■■■ 33.4
TRIM38-201ENST00000357085 EIF3AQ14152 1382 aaKnown RBP8.58□□□□□ -1.04
TRIM38-201ENST00000357085 KCNH8Q96L42 1107 aa8.58□□□□□ -1.04
TRIM38-201ENST00000357085 PODXL2Q9NZ53 605 aa8.58□□□□□ -1.04
TRIM38-201ENST00000357085 CUL7Q14999 1698 aa8.58□□□□□ -1.04
TRIM38-201ENST00000357085 HMGXB3Q12766 1538 aa8.58□□□□□ -1.04
TRIM38-201ENST00000357085 AAMPQ13685 434 aa8.58□□□□□ -1.04
TRIM38-201ENST00000357085 ISY1Q9ULR0 285 aaKnown RBP8.57□□□□□ -1.04
TRIM38-201ENST00000357085 PNNQ9H307 717 aaKnown RBP8.57□□□□□ -1.04
TRIM38-201ENST00000357085 UACAQ9BZF9 1416 aa8.57□□□□□ -1.04
TRIM38-201ENST00000357085 CFAP44Q96MT7 982 aa8.56□□□□□ -1.04
TRIM38-201ENST00000357085 RAPGEF2Q9Y4G8 1499 aa8.56□□□□□ -1.04
TRIM38-201ENST00000357085 GOLGA6L22H0YM25 854 aa8.56□□□□□ -1.04
TRIM38-201ENST00000357085 CNTLNQ9NXG0 1405 aa8.55□□□□□ -1.04
TRIM38-201ENST00000357085 EHBP1L1Q8N3D4 1523 aa8.55□□□□□ -1.04
TRIM38-201ENST00000357085 MTERF4Q7Z6M4 381 aaKnown RBP8.55□□□□□ -1.04
TRIM38-201ENST00000357085 FAM43AQ8N2R8 423 aa8.55□□□□□ -1.04
TRIM38-201ENST00000357085 AKNAQ7Z591 1439 aa8.55□□□□□ -1.04
TRIM38-201ENST00000357085 NGEFQ8N5V2 710 aa8.53□□□□□ -1.04
TRIM38-201ENST00000357085 CC2D2AQ9P2K1 1620 aa8.53□□□□□ -1.04
TRIM38-201ENST00000357085 RALBP1Q15311 655 aa8.53□□□□□ -1.04
TRIM38-201ENST00000357085 NINLQ9Y2I6 1382 aa8.53□□□□□ -1.04
TRIM38-201ENST00000357085 CHMP4BQ9H444 224 aaKnown RBP8.53□□□□□ -1.04
TRIM38-201ENST00000357085 CNGB1Q14028 1251 aaPredicted RBP8.52□□□□□ -1.04
TRIM38-201ENST00000357085 LRRC9Q6ZRR7 1453 aa8.52□□□□□ -1.05
TRIM38-201ENST00000357085 HFM1A2PYH4 1435 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms