RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
ABCD4-201ENST00000356924 PCGF6Q9BYE7 350 aa17.37■□□□□ 0.37
ABCD4-201ENST00000356924 TRIM26Q12899 539 aaPredicted RBP17.37■□□□□ 0.37
ABCD4-201ENST00000356924 PELP1Q8IZL8 1130 aaKnown RBP17.37■□□□□ 0.37
ABCD4-201ENST00000356924 SNAPC4Q5SXM2 1469 aa17.32■□□□□ 0.36
ABCD4-201ENST00000356924 MAGI1Q96QZ7 1491 aaPredicted RBP17.27■□□□□ 0.36
ABCD4-201ENST00000356924 EFCAB5A4FU69 1503 aa17.27■□□□□ 0.35
ABCD4-201ENST00000356924 SAMD9Q5K651 1589 aa17.24■□□□□ 0.35
ABCD4-201ENST00000356924 GRIN2AQ12879 1464 aa17.23■□□□□ 0.35
ABCD4-201ENST00000356924 SYNJ2O15056 1496 aa17.21■□□□□ 0.35
ABCD4-201ENST00000356924 IQGAP2Q13576 1575 aa17.2■□□□□ 0.34
ABCD4-201ENST00000356924 FHOD3Q2V2M9 1422 aa17.2■□□□□ 0.34
ABCD4-201ENST00000356924 P3H3Q8IVL6 736 aa17.18■□□□□ 0.34
ABCD4-201ENST00000356924 TTBK1Q5TCY1 1321 aaPredicted RBP17.17■□□□□ 0.34
ABCD4-201ENST00000356924 PCF11O94913 1555 aaKnown RBP17.15■□□□□ 0.34
ABCD4-201ENST00000356924 CEP170Q5SW79 1584 aa17.15■□□□□ 0.34
ABCD4-201ENST00000356924 KIAA0586Q9BVV6 1533 aa17.15■□□□□ 0.34
ABCD4-201ENST00000356924 APLP2Q06481 763 aa17.15■□□□□ 0.34
ABCD4-201ENST00000356924 UGGT2Q9NYU1 1516 aa17.14■□□□□ 0.33
ABCD4-201ENST00000356924 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
ABCD4-201ENST00000356924 NUP160Q12769 1436 aa17.11■□□□□ 0.33
ABCD4-201ENST00000356924 MAP3K1Q13233 1512 aa17.11■□□□□ 0.33
ABCD4-201ENST00000356924 TIAM1Q13009 1591 aa17.09■□□□□ 0.33
ABCD4-201ENST00000356924 CASKIN1Q8WXD9 1431 aa17.09■□□□□ 0.33
ABCD4-201ENST00000356924 KANK4Q5T7N3 995 aaPredicted RBP17.09■□□□□ 0.33
ABCD4-201ENST00000356924 FYCO1Q9BQS8 1478 aa17.08■□□□□ 0.33
ABCD4-201ENST00000356924 FMN1Q68DA7 1419 aa17.08■□□□□ 0.33
ABCD4-201ENST00000356924 CFAP43Q8NDM7 1665 aa17.08■□□□□ 0.32
ABCD4-201ENST00000356924 FBLN2P98095 1184 aa17.07■□□□□ 0.32
ABCD4-201ENST00000356924 CHD1O14646 1710 aa17.06■□□□□ 0.32
ABCD4-201ENST00000356924 DISP1Q96F81 1524 aa17.05■□□□□ 0.32
ABCD4-201ENST00000356924 KIAA0556O60303 1618 aa17.05■□□□□ 0.32
ABCD4-201ENST00000356924 LRRIQ1Q96JM4 1722 aa17.03■□□□□ 0.32
ABCD4-201ENST00000356924 LRRC9Q6ZRR7 1453 aa17■□□□□ 0.31
ABCD4-201ENST00000356924 ATP1B4Q9UN42 357 aaPredicted RBP16.96■□□□□ 0.31
ABCD4-201ENST00000356924 JPH4Q96JJ6 628 aa16.94■□□□□ 0.3
ABCD4-201ENST00000356924 HECW1Q76N89 1606 aa16.94■□□□□ 0.3
ABCD4-201ENST00000356924 RRBP1Q9P2E9 1410 aaKnown RBP16.91■□□□□ 0.3
ABCD4-201ENST00000356924 SHROOM2Q13796 1616 aa16.89■□□□□ 0.29
ABCD4-201ENST00000356924 CARMIL2Q6F5E8 1435 aa16.89■□□□□ 0.29
ABCD4-201ENST00000356924 CCDC18Q5T9S5 1454 aa16.89■□□□□ 0.29
ABCD4-201ENST00000356924 RAPGEF6Q8TEU7 1601 aa16.89■□□□□ 0.29
ABCD4-201ENST00000356924 EPRSP07814 1512 aaKnown RBP16.88■□□□□ 0.29
ABCD4-201ENST00000356924 MAGI3Q5TCQ9 1506 aa16.86■□□□□ 0.29
ABCD4-201ENST00000356924 PHLDB1Q86UU1 1377 aa16.86■□□□□ 0.29
ABCD4-201ENST00000356924 CLASP1Q7Z460 1538 aa16.85■□□□□ 0.29
ABCD4-201ENST00000356924 CDK13Q14004 1512 aaKnown RBP16.84■□□□□ 0.29
ABCD4-201ENST00000356924 PRG4Q92954 1404 aaPredicted RBP16.84■□□□□ 0.29
ABCD4-201ENST00000356924 NUP153P49790 1475 aaKnown RBP16.84■□□□□ 0.29
ABCD4-201ENST00000356924 EHBP1L1Q8N3D4 1523 aa16.84■□□□□ 0.29
ABCD4-201ENST00000356924 CCNB3Q8WWL7 1395 aa16.82■□□□□ 0.28
ABCD4-201ENST00000356924 MTUS2Q5JR59 1369 aa16.82■□□□□ 0.28
ABCD4-201ENST00000356924 PLB1Q6P1J6 1458 aa16.81■□□□□ 0.28
ABCD4-201ENST00000356924 ABCA8O94911 1581 aa16.81■□□□□ 0.28
ABCD4-201ENST00000356924 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
ABCD4-201ENST00000356924 SUPT6HQ7KZ85 1726 aaKnown RBP16.8■□□□□ 0.28
ABCD4-201ENST00000356924 ARHGEF11O15085 1522 aa16.78■□□□□ 0.28
ABCD4-201ENST00000356924 MYT1Q01538 1121 aa16.78■□□□□ 0.28
ABCD4-201ENST00000356924 ERCC6L2Q5T890 1561 aa16.78■□□□□ 0.28
ABCD4-201ENST00000356924 NCOA2Q15596 1464 aa16.77■□□□□ 0.28
ABCD4-201ENST00000356924 ARID3CA6NKF2 412 aa16.75■□□□□ 0.27
ABCD4-201ENST00000356924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.73■□□□□ 0.27
ABCD4-201ENST00000356924 PTPRGP23470 1445 aa16.73■□□□□ 0.27
ABCD4-201ENST00000356924 FGD6Q6ZV73 1430 aa16.72■□□□□ 0.27
ABCD4-201ENST00000356924 MYOM3Q5VTT5 1437 aa16.7■□□□□ 0.26
ABCD4-201ENST00000356924 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
ABCD4-201ENST00000356924 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.7■□□□□ 0.26
ABCD4-201ENST00000356924 ATP10BO94823 1461 aa16.68■□□□□ 0.26
ABCD4-201ENST00000356924 ADCY10Q96PN6 1610 aa16.66■□□□□ 0.26
ABCD4-201ENST00000356924 TROQ12816 1431 aaPredicted RBP16.66■□□□□ 0.26
ABCD4-201ENST00000356924 FAM50AQ14320 339 aaKnown RBP16.66■□□□□ 0.26
ABCD4-201ENST00000356924 UACAQ9BZF9 1416 aa16.65■□□□□ 0.26
ABCD4-201ENST00000356924 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
ABCD4-201ENST00000356924 PTPN23Q9H3S7 1636 aa16.65■□□□□ 0.26
ABCD4-201ENST00000356924 CCER1Q8TC90 406 aaPredicted RBP16.64■□□□□ 0.26
ABCD4-201ENST00000356924 CDK11AQ9UQ88 783 aaPredicted RBP16.64■□□□□ 0.25
ABCD4-201ENST00000356924 ITGAEP38570 1179 aa16.63■□□□□ 0.25
ABCD4-201ENST00000356924 TCOF1Q13428 1488 aaKnown RBP16.63■□□□□ 0.25
ABCD4-201ENST00000356924 KIF14Q15058 1648 aa16.62■□□□□ 0.25
ABCD4-201ENST00000356924 ABCC2Q92887 1545 aa16.62■□□□□ 0.25
ABCD4-201ENST00000356924 MIA2Q96PC5 1412 aa16.6■□□□□ 0.25
ABCD4-201ENST00000356924 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
ABCD4-201ENST00000356924 UHRF1BP1LA0JNW5 1464 aa16.58■□□□□ 0.24
ABCD4-201ENST00000356924 PTPRKQ15262 1439 aa16.57■□□□□ 0.24
ABCD4-201ENST00000356924 PLEKHD1A6NEE1 506 aa16.55■□□□□ 0.24
ABCD4-201ENST00000356924 ITSN2Q9NZM3 1697 aa16.55■□□□□ 0.24
ABCD4-201ENST00000356924 ABCC10Q5T3U5 1492 aa16.55■□□□□ 0.24
ABCD4-201ENST00000356924 SETD5Q9C0A6 1442 aa16.54■□□□□ 0.24
ABCD4-201ENST00000356924 GPATCH8Q9UKJ3 1502 aaKnown RBP16.53■□□□□ 0.24
ABCD4-201ENST00000356924 ZCCHC11Q5TAX3 1644 aaKnown RBP16.53■□□□□ 0.24
ABCD4-201ENST00000356924 RAB3GAP2Q9H2M9 1393 aa16.52■□□□□ 0.24
ABCD4-201ENST00000356924 CDC42BPAQ5VT25 1732 aa16.52■□□□□ 0.24
ABCD4-201ENST00000356924 DHX57Q6P158 1386 aaKnown RBP16.51■□□□□ 0.23
ABCD4-201ENST00000356924 KDM5BQ9UGL1 1544 aa16.51■□□□□ 0.23
ABCD4-201ENST00000356924 DNMT1P26358 1616 aaKnown RBP16.48■□□□□ 0.23
ABCD4-201ENST00000356924 ZNF644Q9H582 1327 aaPredicted RBP16.47■□□□□ 0.23
ABCD4-201ENST00000356924 CAMSAP2Q08AD1 1489 aa16.46■□□□□ 0.23
ABCD4-201ENST00000356924 HFM1A2PYH4 1435 aa16.46■□□□□ 0.23
ABCD4-201ENST00000356924 DAPK1P53355 1430 aa16.44■□□□□ 0.22
ABCD4-201ENST00000356924 CFDP1Q9UEE9 299 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms