RNA–Protein interactions for RNA: ENST00000354884.8

SLC39A13-201, Transcript of solute carrier family 39 member 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A13, Length 2,289 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A13-201ENST00000354884 ZNF608Q9ULD9 1512 aaPredicted RBP25.42■■□□□ 1.66
SLC39A13-201ENST00000354884 GRIN2BQ13224 1484 aa25.41■■□□□ 1.66
SLC39A13-201ENST00000354884 EFCAB5A4FU69 1503 aa25.4■■□□□ 1.66
SLC39A13-201ENST00000354884 FHAD1B1AJZ9 1412 aa25.39■■□□□ 1.66
SLC39A13-201ENST00000354884 ADAMTS12P58397 1594 aa25.38■■□□□ 1.65
SLC39A13-201ENST00000354884 P3H3Q8IVL6 736 aa25.34■■□□□ 1.65
SLC39A13-201ENST00000354884 KANK4Q5T7N3 995 aaPredicted RBP25.33■■□□□ 1.64
SLC39A13-201ENST00000354884 EIF4G3O43432 1585 aaKnown RBP25.32■■□□□ 1.64
SLC39A13-201ENST00000354884 FHOD3Q2V2M9 1422 aa25.31■■□□□ 1.64
SLC39A13-201ENST00000354884 ZEB1P37275 1124 aaPredicted RBP25.3■■□□□ 1.64
SLC39A13-201ENST00000354884 MAP3K1Q13233 1512 aa25.27■■□□□ 1.64
SLC39A13-201ENST00000354884 SAMD9Q5K651 1589 aa25.26■■□□□ 1.63
SLC39A13-201ENST00000354884 PCF11O94913 1555 aaKnown RBP25.26■■□□□ 1.63
SLC39A13-201ENST00000354884 TIAM1Q13009 1591 aa25.25■■□□□ 1.63
SLC39A13-201ENST00000354884 SNAPC4Q5SXM2 1469 aa25.23■■□□□ 1.63
SLC39A13-201ENST00000354884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.2■■□□□ 1.62
SLC39A13-201ENST00000354884 FYCO1Q9BQS8 1478 aa25.19■■□□□ 1.62
SLC39A13-201ENST00000354884 FMN1Q68DA7 1419 aa25.19■■□□□ 1.62
SLC39A13-201ENST00000354884 IQGAP2Q13576 1575 aa25.18■■□□□ 1.62
SLC39A13-201ENST00000354884 CASKIN1Q8WXD9 1431 aa25.18■■□□□ 1.62
SLC39A13-201ENST00000354884 CFAP43Q8NDM7 1665 aa25.17■■□□□ 1.62
SLC39A13-201ENST00000354884 MAGI1Q96QZ7 1491 aaPredicted RBP25.15■■□□□ 1.62
SLC39A13-201ENST00000354884 HNRNPUL2Q1KMD3 747 aaKnown RBP25.14■■□□□ 1.62
SLC39A13-201ENST00000354884 LRRC9Q6ZRR7 1453 aa25.13■■□□□ 1.61
SLC39A13-201ENST00000354884 CCER1Q8TC90 406 aaPredicted RBP25.13■■□□□ 1.61
SLC39A13-201ENST00000354884 ATP1B4Q9UN42 357 aaPredicted RBP25.12■■□□□ 1.61
SLC39A13-201ENST00000354884 GRIN2AQ12879 1464 aa25.12■■□□□ 1.61
SLC39A13-201ENST00000354884 RRBP1Q9P2E9 1410 aaKnown RBP25.1■■□□□ 1.61
SLC39A13-201ENST00000354884 KIAA0586Q9BVV6 1533 aa25.06■■□□□ 1.6
SLC39A13-201ENST00000354884 SYNJ2O15056 1496 aa25.06■■□□□ 1.6
SLC39A13-201ENST00000354884 UGGT2Q9NYU1 1516 aa25.05■■□□□ 1.6
SLC39A13-201ENST00000354884 CHMP7Q8WUX9 453 aaPredicted RBP25.02■■□□□ 1.6
SLC39A13-201ENST00000354884 CCNB3Q8WWL7 1395 aa25.01■■□□□ 1.59
SLC39A13-201ENST00000354884 LRRIQ1Q96JM4 1722 aa24.99■■□□□ 1.59
SLC39A13-201ENST00000354884 CEP170Q5SW79 1584 aa24.96■■□□□ 1.59
SLC39A13-201ENST00000354884 FBLN2P98095 1184 aa24.95■■□□□ 1.58
SLC39A13-201ENST00000354884 PHLDB1Q86UU1 1377 aa24.94■■□□□ 1.58
SLC39A13-201ENST00000354884 KIAA0556O60303 1618 aa24.92■■□□□ 1.58
SLC39A13-201ENST00000354884 DISP1Q96F81 1524 aa24.92■■□□□ 1.58
SLC39A13-201ENST00000354884 NUP160Q12769 1436 aa24.9■■□□□ 1.58
SLC39A13-201ENST00000354884 HECW1Q76N89 1606 aa24.89■■□□□ 1.57
SLC39A13-201ENST00000354884 MTUS2Q5JR59 1369 aa24.88■■□□□ 1.57
SLC39A13-201ENST00000354884 CCDC18Q5T9S5 1454 aa24.87■■□□□ 1.57
SLC39A13-201ENST00000354884 EPRSP07814 1512 aaKnown RBP24.81■■□□□ 1.56
SLC39A13-201ENST00000354884 EHBP1L1Q8N3D4 1523 aa24.81■■□□□ 1.56
SLC39A13-201ENST00000354884 ITGAEP38570 1179 aa24.79■■□□□ 1.56
SLC39A13-201ENST00000354884 SUPT6HQ7KZ85 1726 aaKnown RBP24.78■■□□□ 1.56
SLC39A13-201ENST00000354884 JPH4Q96JJ6 628 aa24.77■■□□□ 1.56
SLC39A13-201ENST00000354884 FAM50AQ14320 339 aaKnown RBP24.76■■□□□ 1.55
SLC39A13-201ENST00000354884 MAGI3Q5TCQ9 1506 aa24.76■■□□□ 1.55
SLC39A13-201ENST00000354884 NCOA2Q15596 1464 aa24.75■■□□□ 1.55
SLC39A13-201ENST00000354884 CDK13Q14004 1512 aaKnown RBP24.74■■□□□ 1.55
SLC39A13-201ENST00000354884 CARMIL2Q6F5E8 1435 aa24.74■■□□□ 1.55
SLC39A13-201ENST00000354884 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.73■■□□□ 1.55
SLC39A13-201ENST00000354884 RAPGEF6Q8TEU7 1601 aa24.73■■□□□ 1.55
SLC39A13-201ENST00000354884 FGD6Q6ZV73 1430 aa24.73■■□□□ 1.55
SLC39A13-201ENST00000354884 CHD1O14646 1710 aa24.72■■□□□ 1.55
SLC39A13-201ENST00000354884 ARHGEF11O15085 1522 aa24.69■■□□□ 1.54
SLC39A13-201ENST00000354884 NUP153P49790 1475 aaKnown RBP24.69■■□□□ 1.54
SLC39A13-201ENST00000354884 MYOM3Q5VTT5 1437 aa24.68■■□□□ 1.54
SLC39A13-201ENST00000354884 ARID3CA6NKF2 412 aa24.67■■□□□ 1.54
SLC39A13-201ENST00000354884 DHX57Q6P158 1386 aaKnown RBP24.65■■□□□ 1.54
SLC39A13-201ENST00000354884 PLB1Q6P1J6 1458 aa24.62■■□□□ 1.53
SLC39A13-201ENST00000354884 RAB3GAP2Q9H2M9 1393 aa24.6■■□□□ 1.53
SLC39A13-201ENST00000354884 SETD5Q9C0A6 1442 aa24.6■■□□□ 1.53
SLC39A13-201ENST00000354884 CLSPNQ9HAW4 1339 aa24.6■■□□□ 1.53
SLC39A13-201ENST00000354884 PTPN23Q9H3S7 1636 aa24.57■■□□□ 1.52
SLC39A13-201ENST00000354884 PRG4Q92954 1404 aaPredicted RBP24.57■■□□□ 1.52
SLC39A13-201ENST00000354884 CDK11AQ9UQ88 783 aaPredicted RBP24.54■■□□□ 1.52
SLC39A13-201ENST00000354884 ABCA8O94911 1581 aa24.53■■□□□ 1.52
SLC39A13-201ENST00000354884 SHROOM2Q13796 1616 aa24.51■■□□□ 1.51
SLC39A13-201ENST00000354884 TCOF1Q13428 1488 aaKnown RBP24.51■■□□□ 1.51
SLC39A13-201ENST00000354884 MIA2Q96PC5 1412 aa24.49■■□□□ 1.51
SLC39A13-201ENST00000354884 PTPRKQ15262 1439 aa24.48■■□□□ 1.51
SLC39A13-201ENST00000354884 TROQ12816 1431 aaPredicted RBP24.47■■□□□ 1.51
SLC39A13-201ENST00000354884 PTPRGP23470 1445 aa24.46■■□□□ 1.51
SLC39A13-201ENST00000354884 ATP10BO94823 1461 aa24.41■■□□□ 1.5
SLC39A13-201ENST00000354884 HFM1A2PYH4 1435 aa24.41■■□□□ 1.5
SLC39A13-201ENST00000354884 ADCY10Q96PN6 1610 aa24.41■■□□□ 1.5
SLC39A13-201ENST00000354884 CLASP1Q7Z460 1538 aa24.39■■□□□ 1.49
SLC39A13-201ENST00000354884 MAPKBP1O60336 1514 aa24.37■■□□□ 1.49
SLC39A13-201ENST00000354884 KIF14Q15058 1648 aa24.37■■□□□ 1.49
SLC39A13-201ENST00000354884 ERCC6L2Q5T890 1561 aa24.36■■□□□ 1.49
SLC39A13-201ENST00000354884 NAIPQ13075 1403 aa24.35■■□□□ 1.49
SLC39A13-201ENST00000354884 PLEKHD1A6NEE1 506 aa24.34■■□□□ 1.49
SLC39A13-201ENST00000354884 ITSN2Q9NZM3 1697 aa24.33■■□□□ 1.49
SLC39A13-201ENST00000354884 UACAQ9BZF9 1416 aa24.32■■□□□ 1.48
SLC39A13-201ENST00000354884 GPATCH8Q9UKJ3 1502 aaKnown RBP24.3■■□□□ 1.48
SLC39A13-201ENST00000354884 CHIC2Q9UKJ5 165 aa24.28■■□□□ 1.48
SLC39A13-201ENST00000354884 AKNAQ7Z591 1439 aa24.28■■□□□ 1.48
SLC39A13-201ENST00000354884 GCC2Q8IWJ2 1684 aa24.27■■□□□ 1.48
SLC39A13-201ENST00000354884 ZNF644Q9H582 1327 aaPredicted RBP24.27■■□□□ 1.48
SLC39A13-201ENST00000354884 DNMT1P26358 1616 aaKnown RBP24.27■■□□□ 1.48
SLC39A13-201ENST00000354884 DAPK1P53355 1430 aa24.27■■□□□ 1.47
SLC39A13-201ENST00000354884 CFDP1Q9UEE9 299 aaPredicted RBP24.26■■□□□ 1.47
SLC39A13-201ENST00000354884 RRP7BPQ9NSQ0 103 aa24.26■■□□□ 1.47
SLC39A13-201ENST00000354884 ZNF316A6NFI3 1004 aaPredicted RBP24.25■■□□□ 1.47
SLC39A13-201ENST00000354884 ABCC10Q5T3U5 1492 aa24.24■■□□□ 1.47
SLC39A13-201ENST00000354884 CAMSAP2Q08AD1 1489 aa24.23■■□□□ 1.47
SLC39A13-201ENST00000354884 ABCC5O15440 1437 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms