RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 NPM1P06748 294 aaKnown RBP eCLIP16.66■□□□□ 0.26
TRPM3-201ENST00000354500 CEP164Q9UPV0 1460 aa16.65■□□□□ 0.26
TRPM3-201ENST00000354500 CANXP27824 592 aaKnown RBP16.65■□□□□ 0.26
TRPM3-201ENST00000354500 KCNH8Q96L42 1107 aa16.64■□□□□ 0.26
TRPM3-201ENST00000354500 BAZ1AQ9NRL2 1556 aaPredicted RBP16.63■□□□□ 0.25
TRPM3-201ENST00000354500 EIF4G2P78344 907 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRPM3-201ENST00000354500 RGL3Q3MIN7 710 aa16.61■□□□□ 0.25
TRPM3-201ENST00000354500 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
TRPM3-201ENST00000354500 SLC24A1O60721 1099 aa16.6■□□□□ 0.25
TRPM3-201ENST00000354500 TSPY4P0CV99 314 aa16.6■□□□□ 0.25
TRPM3-201ENST00000354500 TSPY10P0CW01 314 aa16.6■□□□□ 0.25
TRPM3-201ENST00000354500 SUPT16HQ9Y5B9 1047 aaKnown RBP16.59■□□□□ 0.25
TRPM3-201ENST00000354500 CCDC136Q96JN2 1154 aa16.59■□□□□ 0.25
TRPM3-201ENST00000354500 ANP32AP39687 249 aaKnown RBP16.58■□□□□ 0.25
TRPM3-201ENST00000354500 ESF1Q9H501 851 aaKnown RBP16.57■□□□□ 0.24
TRPM3-201ENST00000354500 NBR1Q14596 966 aa16.56■□□□□ 0.24
TRPM3-201ENST00000354500 STAG3Q9UJ98 1225 aa16.55■□□□□ 0.24
TRPM3-201ENST00000354500 CCNB3Q8WWL7 1395 aa16.53■□□□□ 0.24
TRPM3-201ENST00000354500 RUSC2Q8N2Y8 1516 aa16.52■□□□□ 0.24
TRPM3-201ENST00000354500 WIZO95785 1651 aa16.51■□□□□ 0.23
TRPM3-201ENST00000354500 FOXD1Q16676 465 aa16.5■□□□□ 0.23
TRPM3-201ENST00000354500 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
TRPM3-201ENST00000354500 CFDP1Q9UEE9 299 aaPredicted RBP16.47■□□□□ 0.23
TRPM3-201ENST00000354500 VPS8Q8N3P4 1428 aa16.47■□□□□ 0.23
TRPM3-201ENST00000354500 CUX2O14529 1486 aa16.46■□□□□ 0.23
TRPM3-201ENST00000354500 PLEKHD1A6NEE1 506 aa16.43■□□□□ 0.22
TRPM3-201ENST00000354500 ZBTB47Q9UFB7 747 aaPredicted RBP16.39■□□□□ 0.21
TRPM3-201ENST00000354500 CARD11Q9BXL7 1154 aa16.38■□□□□ 0.21
TRPM3-201ENST00000354500 WDR43Q15061 677 aaKnown RBP eCLIP16.37■□□□□ 0.21
TRPM3-201ENST00000354500 B4GALNT3Q6L9W6 998 aa16.37■□□□□ 0.21
TRPM3-201ENST00000354500 NEFMP07197 916 aa16.37■□□□□ 0.21
TRPM3-201ENST00000354500 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
TRPM3-201ENST00000354500 RAB3GAP2Q9H2M9 1393 aa16.36■□□□□ 0.21
TRPM3-201ENST00000354500 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
TRPM3-201ENST00000354500 ARXQ96QS3 562 aa16.35■□□□□ 0.21
TRPM3-201ENST00000354500 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
TRPM3-201ENST00000354500 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
TRPM3-201ENST00000354500 HSPA5P11021 654 aaKnown RBP16.31■□□□□ 0.2
TRPM3-201ENST00000354500 SETD5Q9C0A6 1442 aa16.3■□□□□ 0.2
TRPM3-201ENST00000354500 NEUROD2Q15784 382 aa16.28■□□□□ 0.2
TRPM3-201ENST00000354500 CC2D1BQ5T0F9 858 aaKnown RBP16.27■□□□□ 0.2
TRPM3-201ENST00000354500 DCAF11Q8TEB1 546 aa16.27■□□□□ 0.2
TRPM3-201ENST00000354500 FHAD1B1AJZ9 1412 aa16.25■□□□□ 0.19
TRPM3-201ENST00000354500 TNNT2P45379 298 aaPredicted RBP16.25■□□□□ 0.19
TRPM3-201ENST00000354500 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
TRPM3-201ENST00000354500 EIF4G1Q04637 1599 aaKnown RBP16.24■□□□□ 0.19
TRPM3-201ENST00000354500 ANP32EQ9BTT0 268 aa16.23■□□□□ 0.19
TRPM3-201ENST00000354500 EIF5BO60841 1220 aaKnown RBP16.21■□□□□ 0.19
TRPM3-201ENST00000354500 TOP2AP11388 1531 aaKnown RBP16.21■□□□□ 0.19
TRPM3-201ENST00000354500 FHOD3Q2V2M9 1422 aa16.21■□□□□ 0.18
TRPM3-201ENST00000354500 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.2■□□□□ 0.18
TRPM3-201ENST00000354500 PKD2Q13563 968 aa16.2■□□□□ 0.18
TRPM3-201ENST00000354500 DHX57Q6P158 1386 aaKnown RBP16.2■□□□□ 0.18
TRPM3-201ENST00000354500 HSP90AA1P07900 732 aaKnown RBP16.19■□□□□ 0.18
TRPM3-201ENST00000354500 ARID4BQ4LE39 1312 aaPredicted RBP16.18■□□□□ 0.18
TRPM3-201ENST00000354500 KNSTRNQ9Y448 316 aa16.18■□□□□ 0.18
TRPM3-201ENST00000354500 MPHOSPH9Q99550 1183 aa16.18■□□□□ 0.18
TRPM3-201ENST00000354500 PPP4R2Q9NY27 417 aa16.18■□□□□ 0.18
TRPM3-201ENST00000354500 L3MBTL2Q969R5 705 aa16.18■□□□□ 0.18
TRPM3-201ENST00000354500 RBM19Q9Y4C8 960 aaKnown RBP16.17■□□□□ 0.18
TRPM3-201ENST00000354500 PPM1GO15355 546 aaPredicted RBP16.15■□□□□ 0.18
TRPM3-201ENST00000354500 RGS3P49796 1198 aa16.15■□□□□ 0.18
TRPM3-201ENST00000354500 UPF2Q9HAU5 1272 aaKnown RBP16.15■□□□□ 0.18
TRPM3-201ENST00000354500 ARHGAP35Q9NRY4 1499 aa16.15■□□□□ 0.18
TRPM3-201ENST00000354500 LAS1LQ9Y4W2 734 aaKnown RBP16.14■□□□□ 0.17
TRPM3-201ENST00000354500 TIMELESSQ9UNS1 1208 aa16.13■□□□□ 0.17
TRPM3-201ENST00000354500 ATAD2BQ9ULI0 1458 aa16.13■□□□□ 0.17
TRPM3-201ENST00000354500 TSHZ2Q9NRE2 1034 aa16.13■□□□□ 0.17
TRPM3-201ENST00000354500 CCER2I3L3R5 266 aa16.13■□□□□ 0.17
TRPM3-201ENST00000354500 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
TRPM3-201ENST00000354500 MLECQ14165 292 aa16.1■□□□□ 0.17
TRPM3-201ENST00000354500 FRAT1Q92837 279 aaPredicted RBP16.09■□□□□ 0.17
TRPM3-201ENST00000354500 C14orf37Q86TY3 774 aa16.09■□□□□ 0.17
TRPM3-201ENST00000354500 SAFB2Q14151 953 aaKnown RBP eCLIP16.07■□□□□ 0.16
TRPM3-201ENST00000354500 SMARCA2P51531 1590 aa16.06■□□□□ 0.16
TRPM3-201ENST00000354500 CADPSQ9ULU8 1353 aa16.06■□□□□ 0.16
TRPM3-201ENST00000354500 SMARCA4P51532 1647 aa16.05■□□□□ 0.16
TRPM3-201ENST00000354500 A0A0G2JS52 829 aa16.04■□□□□ 0.16
TRPM3-201ENST00000354500 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
TRPM3-201ENST00000354500 HNRNPMP52272 730 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRPM3-201ENST00000354500 RTN4Q9NQC3 1192 aaKnown RBP16.02■□□□□ 0.16
TRPM3-201ENST00000354500 NUP155O75694 1391 aa16.02■□□□□ 0.16
TRPM3-201ENST00000354500 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
TRPM3-201ENST00000354500 GGT6Q6P531 493 aa16■□□□□ 0.15
TRPM3-201ENST00000354500 FMN1Q68DA7 1419 aa15.98■□□□□ 0.15
TRPM3-201ENST00000354500 U2SURPO15042 1029 aaKnown RBP15.98■□□□□ 0.15
TRPM3-201ENST00000354500 TMF1P82094 1093 aa15.98■□□□□ 0.15
TRPM3-201ENST00000354500 NOP58Q9Y2X3 529 aaKnown RBP15.98■□□□□ 0.15
TRPM3-201ENST00000354500 IGF1RP08069 1367 aa15.97■□□□□ 0.15
TRPM3-201ENST00000354500 CDCA8Q53HL2 280 aa15.97■□□□□ 0.15
TRPM3-201ENST00000354500 CFAP53Q96M91 514 aa15.94■□□□□ 0.14
TRPM3-201ENST00000354500 ZNF644Q9H582 1327 aaPredicted RBP15.94■□□□□ 0.14
TRPM3-201ENST00000354500 ST20-MTHFSA0A0A6YYL1 179 aa15.94■□□□□ 0.14
TRPM3-201ENST00000354500 FTSJ3Q8IY81 847 aaKnown RBP15.93■□□□□ 0.14
TRPM3-201ENST00000354500 SOX12O15370 315 aa15.93■□□□□ 0.14
TRPM3-201ENST00000354500 LMOD2Q6P5Q4 547 aa15.92■□□□□ 0.14
TRPM3-201ENST00000354500 POGKQ9P215 609 aa15.92■□□□□ 0.14
TRPM3-201ENST00000354500 STK26Q9P289 416 aa15.92■□□□□ 0.14
TRPM3-201ENST00000354500 PHLDB1Q86UU1 1377 aa15.92■□□□□ 0.14
TRPM3-201ENST00000354500 NUTM2DQ5VT03 806 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms