RNA–Protein interactions for RNA: ENST00000354449.7

ATG7-201, Transcript of autophagy related 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG7, Length 4,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG7-201ENST00000354449 NOP58Q9Y2X3 529 aaKnown RBP17.41■□□□□ 0.38
ATG7-201ENST00000354449 TNNT2P45379 298 aaPredicted RBP17.41■□□□□ 0.38
ATG7-201ENST00000354449 RTN4Q9NQC3 1192 aaKnown RBP17.4■□□□□ 0.38
ATG7-201ENST00000354449 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
ATG7-201ENST00000354449 EEA1Q15075 1411 aa17.39■□□□□ 0.37
ATG7-201ENST00000354449 PPP4R2Q9NY27 417 aa17.37■□□□□ 0.37
ATG7-201ENST00000354449 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
ATG7-201ENST00000354449 ABCC8Q09428 1581 aa17.35■□□□□ 0.37
ATG7-201ENST00000354449 DEKP35659 375 aaKnown RBP17.35■□□□□ 0.37
ATG7-201ENST00000354449 HIRIP3Q9BW71 556 aaPredicted RBP17.33■□□□□ 0.36
ATG7-201ENST00000354449 WDR43Q15061 677 aaKnown RBP eCLIP17.32■□□□□ 0.36
ATG7-201ENST00000354449 NAP1L5Q96NT1 182 aaPredicted RBP17.32■□□□□ 0.36
ATG7-201ENST00000354449 EIF4G2P78344 907 aaKnown RBP eCLIP17.32■□□□□ 0.36
ATG7-201ENST00000354449 CEP162Q5TB80 1403 aa17.31■□□□□ 0.36
ATG7-201ENST00000354449 SOGA1O94964 1423 aa17.31■□□□□ 0.36
ATG7-201ENST00000354449 GOLGA6L22H0YM25 854 aa17.3■□□□□ 0.36
ATG7-201ENST00000354449 RBM19Q9Y4C8 960 aaKnown RBP17.29■□□□□ 0.36
ATG7-201ENST00000354449 LAS1LQ9Y4W2 734 aaKnown RBP17.29■□□□□ 0.36
ATG7-201ENST00000354449 GOLGA3Q08378 1498 aa17.28■□□□□ 0.36
ATG7-201ENST00000354449 TNIKQ9UKE5 1360 aa17.27■□□□□ 0.36
ATG7-201ENST00000354449 ZNF777Q9ULD5 760 aaPredicted RBP17.27■□□□□ 0.35
ATG7-201ENST00000354449 SMARCA2P51531 1590 aa17.27■□□□□ 0.35
ATG7-201ENST00000354449 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
ATG7-201ENST00000354449 CLIP1P30622 1438 aa17.23■□□□□ 0.35
ATG7-201ENST00000354449 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
ATG7-201ENST00000354449 NCLP19338 710 aaKnown RBP17.2■□□□□ 0.34
ATG7-201ENST00000354449 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
ATG7-201ENST00000354449 PTMAP06454 111 aaKnown RBP17.17■□□□□ 0.34
ATG7-201ENST00000354449 DNTTIP2Q5QJE6 756 aaKnown RBP17.16■□□□□ 0.34
ATG7-201ENST00000354449 CHIC2Q9UKJ5 165 aa17.16■□□□□ 0.34
ATG7-201ENST00000354449 MYH16Q9H6N6 1097 aa17.15■□□□□ 0.34
ATG7-201ENST00000354449 B4GALNT3Q6L9W6 998 aa17.15■□□□□ 0.34
ATG7-201ENST00000354449 TSHZ2Q9NRE2 1034 aa17.14■□□□□ 0.33
ATG7-201ENST00000354449 L1TD1Q5T7N2 865 aaKnown RBP17.1■□□□□ 0.33
ATG7-201ENST00000354449 KIF27Q86VH2 1401 aa17.09■□□□□ 0.33
ATG7-201ENST00000354449 FBLN2P98095 1184 aa17.08■□□□□ 0.32
ATG7-201ENST00000354449 KDM2AQ9Y2K7 1162 aa17.07■□□□□ 0.32
ATG7-201ENST00000354449 CDK11BP21127 795 aaKnown RBP17.07■□□□□ 0.32
ATG7-201ENST00000354449 CCER2I3L3R5 266 aa17.07■□□□□ 0.32
ATG7-201ENST00000354449 MTUS2Q5JR59 1369 aa17.05■□□□□ 0.32
ATG7-201ENST00000354449 RGS3P49796 1198 aa17.04■□□□□ 0.32
ATG7-201ENST00000354449 RUSC2Q8N2Y8 1516 aa17.03■□□□□ 0.32
ATG7-201ENST00000354449 CHGAP10645 457 aaKnown RBP17■□□□□ 0.31
ATG7-201ENST00000354449 SENP3-EIF4A1A0A087X0R7 540 aa16.99■□□□□ 0.31
ATG7-201ENST00000354449 BICRAQ9NZM4 1560 aa16.98■□□□□ 0.31
ATG7-201ENST00000354449 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.97■□□□□ 0.31
ATG7-201ENST00000354449 MSNP26038 577 aaKnown RBP16.97■□□□□ 0.31
ATG7-201ENST00000354449 TSPY4P0CV99 314 aa16.96■□□□□ 0.31
ATG7-201ENST00000354449 TSPY10P0CW01 314 aa16.96■□□□□ 0.31
ATG7-201ENST00000354449 PNNQ9H307 717 aaKnown RBP16.96■□□□□ 0.3
ATG7-201ENST00000354449 RRP7BPQ9NSQ0 103 aa16.95■□□□□ 0.3
ATG7-201ENST00000354449 TIMELESSQ9UNS1 1208 aa16.95■□□□□ 0.3
ATG7-201ENST00000354449 CASC1Q6TDU7 716 aa16.94■□□□□ 0.3
ATG7-201ENST00000354449 FTSJ3Q8IY81 847 aaKnown RBP16.92■□□□□ 0.3
ATG7-201ENST00000354449 SIN3AQ96ST3 1273 aa16.92■□□□□ 0.3
ATG7-201ENST00000354449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.92■□□□□ 0.33e-6■■□□□ 11.7
ATG7-201ENST00000354449 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
ATG7-201ENST00000354449 ZRSR1Q15695 479 aaKnown RBP16.92■□□□□ 0.3
ATG7-201ENST00000354449 CUX2O14529 1486 aa16.91■□□□□ 0.3
ATG7-201ENST00000354449 IPO9Q96P70 1041 aaKnown RBP16.9■□□□□ 0.3
ATG7-201ENST00000354449 CHAF1AQ13111 956 aaPredicted RBP16.9■□□□□ 0.3
ATG7-201ENST00000354449 KNSTRNQ9Y448 316 aa16.89■□□□□ 0.29
ATG7-201ENST00000354449 VPS8Q8N3P4 1428 aa16.89■□□□□ 0.29
ATG7-201ENST00000354449 UNC13AQ9UPW8 1703 aa16.89■□□□□ 0.29
ATG7-201ENST00000354449 NCAPD3P42695 1498 aa16.88■□□□□ 0.29
ATG7-201ENST00000354449 PLCB2Q00722 1185 aa16.88■□□□□ 0.29
ATG7-201ENST00000354449 HSCBQ8IWL3 235 aa16.88■□□□□ 0.29
ATG7-201ENST00000354449 TCERG1O14776 1098 aaKnown RBP16.88■□□□□ 0.29
ATG7-201ENST00000354449 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
ATG7-201ENST00000354449 CDCA8Q53HL2 280 aa16.87■□□□□ 0.29
ATG7-201ENST00000354449 RAPGEF2Q9Y4G8 1499 aa16.87■□□□□ 0.29
ATG7-201ENST00000354449 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
ATG7-201ENST00000354449 EIF4G1Q04637 1599 aaKnown RBP16.86■□□□□ 0.29
ATG7-201ENST00000354449 CARD11Q9BXL7 1154 aa16.85■□□□□ 0.29
ATG7-201ENST00000354449 CARMIL1Q5VZK9 1371 aa16.84■□□□□ 0.29
ATG7-201ENST00000354449 ARID4BQ4LE39 1312 aaPredicted RBP16.84■□□□□ 0.29
ATG7-201ENST00000354449 STAG3Q9UJ98 1225 aa16.84■□□□□ 0.29
ATG7-201ENST00000354449 MS4A1P11836 297 aa16.83■□□□□ 0.29
ATG7-201ENST00000354449 USP35Q9P2H5 1018 aa16.83■□□□□ 0.29
ATG7-201ENST00000354449 FRAT1Q92837 279 aaPredicted RBP16.82■□□□□ 0.28
ATG7-201ENST00000354449 CHMP4BQ9H444 224 aaKnown RBP16.81■□□□□ 0.28
ATG7-201ENST00000354449 NRDCO43847 1150 aa16.81■□□□□ 0.28
ATG7-201ENST00000354449 GOLGA6L6A8MZA4 724 aa16.8■□□□□ 0.28
ATG7-201ENST00000354449 RSPH6AQ9H0K4 717 aa16.8■□□□□ 0.28
ATG7-201ENST00000354449 TPRNQ4KMQ1 711 aa16.8■□□□□ 0.28
ATG7-201ENST00000354449 PTMSP20962 102 aa16.79■□□□□ 0.28
ATG7-201ENST00000354449 SYNJ1O43426 1573 aa16.78■□□□□ 0.28
ATG7-201ENST00000354449 NEUROD2Q15784 382 aa16.77■□□□□ 0.27
ATG7-201ENST00000354449 GBP4Q96PP9 640 aa16.77■□□□□ 0.27
ATG7-201ENST00000354449 CCNB3Q8WWL7 1395 aa16.76■□□□□ 0.27
ATG7-201ENST00000354449 GOLGA6L3A6NEY3 463 aa16.76■□□□□ 0.27
ATG7-201ENST00000354449 HSP90AA2PQ14568 343 aaPredicted RBP16.75■□□□□ 0.27
ATG7-201ENST00000354449 RGL3Q3MIN7 710 aa16.75■□□□□ 0.27
ATG7-201ENST00000354449 SPRYD3Q8NCJ5 442 aa16.74■□□□□ 0.27
ATG7-201ENST00000354449 PEG3Q9GZU2 1588 aa16.73■□□□□ 0.27
ATG7-201ENST00000354449 GZF1Q9H116 711 aaPredicted RBP16.73■□□□□ 0.27
ATG7-201ENST00000354449 SLKQ9H2G2 1235 aaPredicted RBP16.73■□□□□ 0.27
ATG7-201ENST00000354449 FANCIQ9NVI1 1328 aa16.73■□□□□ 0.27
ATG7-201ENST00000354449 KANK4Q5T7N3 995 aaPredicted RBP16.73■□□□□ 0.27
ATG7-201ENST00000354449 KIAA2012Q0VF49 1180 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms