RNA–Protein interactions for RNA: ENST00000353364.7

USP15-203, Transcript of ubiquitin specific peptidase 15, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP15, Length 14,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-203ENST00000353364 KAT6BQ8WYB5 2073 aa4.32□□□□□ -1.72
USP15-203ENST00000353364 PPM1FP49593 454 aaPredicted RBP4.31□□□□□ -1.72
USP15-203ENST00000353364 NCLP19338 710 aaKnown RBP4.31□□□□□ -1.72
USP15-203ENST00000353364 ZRSR1Q15695 479 aaKnown RBP4.3□□□□□ -1.72
USP15-203ENST00000353364 ANP32BQ92688 251 aaKnown RBP4.3□□□□□ -1.72
USP15-203ENST00000353364 FAM50AQ14320 339 aaKnown RBP4.3□□□□□ -1.72
USP15-203ENST00000353364 TRIM44Q96DX7 344 aaPredicted RBP4.3□□□□□ -1.72
USP15-203ENST00000353364 ZNF777Q9ULD5 760 aaPredicted RBP4.29□□□□□ -1.72
USP15-203ENST00000353364 TAOK2Q9UL54 1235 aa4.29□□□□□ -1.72
USP15-203ENST00000353364 MYH16Q9H6N6 1097 aa4.29□□□□□ -1.72
USP15-203ENST00000353364 SPDYE4A6NLX3 237 aa4.28□□□□□ -1.72
USP15-203ENST00000353364 ZNF710Q8N1W2 664 aa4.28□□□□□ -1.72
USP15-203ENST00000353364 CTDP1Q9Y5B0 961 aaPredicted RBP4.28□□□□□ -1.72
USP15-203ENST00000353364 CHMP7Q8WUX9 453 aaPredicted RBP4.28□□□□□ -1.72
USP15-203ENST00000353364 PAXIP1Q6ZW49 1069 aaPredicted RBP4.27□□□□□ -1.73
USP15-203ENST00000353364 MIER1Q8N108 512 aa4.27□□□□□ -1.73
USP15-203ENST00000353364 TCEAL9Q9UHQ7 104 aa4.27□□□□□ -1.73
USP15-203ENST00000353364 PPP1R1BQ9UD71 204 aaPredicted RBP4.27□□□□□ -1.73
USP15-203ENST00000353364 ARID3CA6NKF2 412 aa4.26□□□□□ -1.73
USP15-203ENST00000353364 PAF1Q8N7H5 531 aa4.26□□□□□ -1.73
USP15-203ENST00000353364 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.26□□□□□ -1.733e-6■■■■■ 51.1
USP15-203ENST00000353364 TRIM34Q9BYJ4 488 aa4.26□□□□□ -1.73
USP15-203ENST00000353364 RFX1P22670 979 aa4.26□□□□□ -1.73
USP15-203ENST00000353364 STAC3Q96MF2 364 aa4.25□□□□□ -1.73
USP15-203ENST00000353364 ZEB1P37275 1124 aaPredicted RBP4.25□□□□□ -1.73
USP15-203ENST00000353364 NBR1Q14596 966 aa4.25□□□□□ -1.73
USP15-203ENST00000353364 WDHD1O75717 1129 aaPredicted RBP4.25□□□□□ -1.73
USP15-203ENST00000353364 PDE4CQ08493 712 aa4.25□□□□□ -1.73
USP15-203ENST00000353364 DIEXFQ68CQ4 756 aaKnown RBP4.25□□□□□ -1.73
USP15-203ENST00000353364 WASHC2AQ641Q2 1341 aa4.24□□□□□ -1.73
USP15-203ENST00000353364 IL27Q8NEV9 243 aa4.24□□□□□ -1.73
USP15-203ENST00000353364 RRP12Q5JTH9 1297 aaKnown RBP4.23□□□□□ -1.73
USP15-203ENST00000353364 VPS53Q5VIR6 699 aa4.23□□□□□ -1.73
USP15-203ENST00000353364 CSRNP3Q8WYN3 585 aa4.23□□□□□ -1.73
USP15-203ENST00000353364 KIAA2012Q0VF49 1180 aa4.23□□□□□ -1.73
USP15-203ENST00000353364 NOC3LQ8WTT2 800 aaKnown RBP4.23□□□□□ -1.73
USP15-203ENST00000353364 CCAR1Q8IX12 1150 aaKnown RBP4.23□□□□□ -1.73
USP15-203ENST00000353364 SPRYD3Q8NCJ5 442 aa4.23□□□□□ -1.73
USP15-203ENST00000353364 C16orf71Q8IYS4 520 aaPredicted RBP4.23□□□□□ -1.73
USP15-203ENST00000353364 ANP32CO43423 234 aa4.22□□□□□ -1.73
USP15-203ENST00000353364 UPF2Q9HAU5 1272 aaKnown RBP4.22□□□□□ -1.73
USP15-203ENST00000353364 L1TD1Q5T7N2 865 aaKnown RBP4.21□□□□□ -1.73
USP15-203ENST00000353364 CSB-PGBD3P0DP91 1061 aa4.21□□□□□ -1.74
USP15-203ENST00000353364 GTF2E1P29083 439 aaPredicted RBP4.21□□□□□ -1.74
USP15-203ENST00000353364 CHAF1AQ13111 956 aaPredicted RBP4.21□□□□□ -1.74
USP15-203ENST00000353364 NAP1L2Q9ULW6 460 aaPredicted RBP4.21□□□□□ -1.74
USP15-203ENST00000353364 ZNF330Q9Y3S2 320 aaPredicted RBP4.21□□□□□ -1.74
USP15-203ENST00000353364 FBXW7Q969H0 707 aa4.2□□□□□ -1.74
USP15-203ENST00000353364 SCRIBQ14160 1630 aa4.2□□□□□ -1.74
USP15-203ENST00000353364 CEP89Q96ST8 783 aa4.2□□□□□ -1.74
USP15-203ENST00000353364 PRDM2Q13029 1718 aa4.2□□□□□ -1.74
USP15-203ENST00000353364 TMEM87AQ8NBN3 555 aa4.2□□□□□ -1.74
USP15-203ENST00000353364 PNNQ9H307 717 aaKnown RBP4.2□□□□□ -1.74
USP15-203ENST00000353364 FGD1P98174 961 aa4.2□□□□□ -1.74
USP15-203ENST00000353364 MLECQ14165 292 aa4.19□□□□□ -1.74
USP15-203ENST00000353364 PLCD3Q8N3E9 789 aa4.19□□□□□ -1.74
USP15-203ENST00000353364 OS9Q13438 667 aaPredicted RBP4.19□□□□□ -1.74
USP15-203ENST00000353364 CCDC43Q96MW1 224 aaKnown RBP4.18□□□□□ -1.74
USP15-203ENST00000353364 GNL2Q13823 731 aaKnown RBP4.18□□□□□ -1.74
USP15-203ENST00000353364 WWC1Q8IX03 1113 aa4.18□□□□□ -1.74
USP15-203ENST00000353364 AK7Q96M32 723 aa4.18□□□□□ -1.74
USP15-203ENST00000353364 ANO8Q9HCE9 1232 aaPredicted RBP4.18□□□□□ -1.74
USP15-203ENST00000353364 GOLGA6L6A8MZA4 724 aa4.17□□□□□ -1.74
USP15-203ENST00000353364 NOP2P46087 812 aaKnown RBP4.17□□□□□ -1.74
USP15-203ENST00000353364 ZMYND15Q9H091 742 aa4.17□□□□□ -1.74
USP15-203ENST00000353364 CCDC180Q9P1Z9 1646 aa4.17□□□□□ -1.74
USP15-203ENST00000353364 CCDC97Q96F63 343 aaPredicted RBP4.17□□□□□ -1.74
USP15-203ENST00000353364 AMER1Q5JTC6 1135 aaPredicted RBP4.16□□□□□ -1.74
USP15-203ENST00000353364 WWC2Q6AWC2 1192 aa4.16□□□□□ -1.74
USP15-203ENST00000353364 PRKCSHP14314 528 aaPredicted RBP4.16□□□□□ -1.74
USP15-203ENST00000353364 NOL10Q9BSC4 688 aaKnown RBP4.16□□□□□ -1.74
USP15-203ENST00000353364 RB1CC1Q8TDY2 1594 aa4.16□□□□□ -1.74
USP15-203ENST00000353364 UQCRHLA0A096LP55 91 aa4.15□□□□□ -1.74
USP15-203ENST00000353364 RAD21O60216 631 aa4.15□□□□□ -1.74
USP15-203ENST00000353364 PABPN1Q86U42 306 aaKnown RBP eCLIP4.15□□□□□ -1.75
USP15-203ENST00000353364 FRAT2O75474 233 aaPredicted RBP4.14□□□□□ -1.75
USP15-203ENST00000353364 KCNJ4P48050 445 aa4.14□□□□□ -1.75
USP15-203ENST00000353364 A0A0U1RQG5 324 aaPredicted RBP4.14□□□□□ -1.75
USP15-203ENST00000353364 HDGFP51858 240 aaKnown RBP4.14□□□□□ -1.75
USP15-203ENST00000353364 TPRNQ4KMQ1 711 aa4.14□□□□□ -1.75
USP15-203ENST00000353364 CASC1Q6TDU7 716 aa4.14□□□□□ -1.75
USP15-203ENST00000353364 PAK3O75914 559 aaPredicted RBP4.14□□□□□ -1.75
USP15-203ENST00000353364 BEGAINQ9BUH8 593 aa4.14□□□□□ -1.75
USP15-203ENST00000353364 CA8P35219 290 aa4.14□□□□□ -1.75
USP15-203ENST00000353364 CBX1P83916 185 aa4.14□□□□□ -1.75
USP15-203ENST00000353364 SRPK2P78362 688 aaKnown RBP4.14□□□□□ -1.75
USP15-203ENST00000353364 BBXQ8WY36 941 aaPredicted RBP4.14□□□□□ -1.75
USP15-203ENST00000353364 UQCRHP07919 91 aa4.14□□□□□ -1.75
USP15-203ENST00000353364 RASSF8Q8NHQ8 419 aa4.14□□□□□ -1.75
USP15-203ENST00000353364 R3HCC1Q9Y3T6 440 aaKnown RBP4.14□□□□□ -1.75
USP15-203ENST00000353364 PTMAP06454 111 aaKnown RBP4.14□□□□□ -1.75
USP15-203ENST00000353364 AMOTL1Q8IY63 956 aa4.13□□□□□ -1.75
USP15-203ENST00000353364 POGKQ9P215 609 aa4.13□□□□□ -1.75
USP15-203ENST00000353364 MARCH6O60337 910 aa4.13□□□□□ -1.75
USP15-203ENST00000353364 KANK1Q14678 1352 aa4.13□□□□□ -1.75
USP15-203ENST00000353364 KCNA4P22459 653 aa4.13□□□□□ -1.75
USP15-203ENST00000353364 RSPH4AQ5TD94 716 aa4.13□□□□□ -1.75
USP15-203ENST00000353364 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.13□□□□□ -1.75
USP15-203ENST00000353364 WDR43Q15061 677 aaKnown RBP eCLIP4.13□□□□□ -1.75
USP15-203ENST00000353364 IPO9Q96P70 1041 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms