RNA–Protein interactions for RNA: ENST00000348911.10

SBF1-201, Transcript of SET binding factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SBF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-201ENST00000348911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.43■□□□□ 0.864e-8■■■□□ 16.4
SBF1-201ENST00000348911 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.86
SBF1-201ENST00000348911 CEP164Q9UPV0 1460 aa20.41■□□□□ 0.86
SBF1-201ENST00000348911 ARXQ96QS3 562 aa20.4■□□□□ 0.86
SBF1-201ENST00000348911 GLIPR1L2Q4G1C9 344 aa20.4■□□□□ 0.86
SBF1-201ENST00000348911 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
SBF1-201ENST00000348911 DDRGK1Q96HY6 314 aa20.37■□□□□ 0.85
SBF1-201ENST00000348911 TSPY4P0CV99 314 aa20.37■□□□□ 0.85
SBF1-201ENST00000348911 TSPY10P0CW01 314 aa20.37■□□□□ 0.85
SBF1-201ENST00000348911 SIN3AQ96ST3 1273 aa20.3■□□□□ 0.84
SBF1-201ENST00000348911 PPP4R2Q9NY27 417 aa20.29■□□□□ 0.84
SBF1-201ENST00000348911 SENP3-EIF4A1A0A087X0R7 540 aa20.27■□□□□ 0.84
SBF1-201ENST00000348911 STAG3Q9UJ98 1225 aa20.25■□□□□ 0.83
SBF1-201ENST00000348911 BECN1Q14457 450 aa20.25■□□□□ 0.83
SBF1-201ENST00000348911 KIF27Q86VH2 1401 aa20.24■□□□□ 0.83
SBF1-201ENST00000348911 NOP58Q9Y2X3 529 aaKnown RBP20.19■□□□□ 0.82
SBF1-201ENST00000348911 CCNB3Q8WWL7 1395 aa20.18■□□□□ 0.82
SBF1-201ENST00000348911 PPM1GO15355 546 aaPredicted RBP20.17■□□□□ 0.82
SBF1-201ENST00000348911 SOGA1O94964 1423 aa20.17■□□□□ 0.82
SBF1-201ENST00000348911 BAZ1BQ9UIG0 1483 aaKnown RBP20.16■□□□□ 0.82
SBF1-201ENST00000348911 NACADO15069 1562 aa20.15■□□□□ 0.82
SBF1-201ENST00000348911 ESF1Q9H501 851 aaKnown RBP20.15■□□□□ 0.82
SBF1-201ENST00000348911 MYH16Q9H6N6 1097 aa20.14■□□□□ 0.82
SBF1-201ENST00000348911 CARD11Q9BXL7 1154 aa20.14■□□□□ 0.81
SBF1-201ENST00000348911 B4GALNT3Q6L9W6 998 aa20.13■□□□□ 0.81
SBF1-201ENST00000348911 LAS1LQ9Y4W2 734 aaKnown RBP20.13■□□□□ 0.81
SBF1-201ENST00000348911 RGL3Q3MIN7 710 aa20.12■□□□□ 0.81
SBF1-201ENST00000348911 CHMP7Q8WUX9 453 aaPredicted RBP20.12■□□□□ 0.81
SBF1-201ENST00000348911 CCER2I3L3R5 266 aa20.11■□□□□ 0.81
SBF1-201ENST00000348911 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
SBF1-201ENST00000348911 RBM19Q9Y4C8 960 aaKnown RBP20.09■□□□□ 0.81
SBF1-201ENST00000348911 CECR2Q9BXF3 1484 aa20.09■□□□□ 0.81
SBF1-201ENST00000348911 TRIM44Q96DX7 344 aaPredicted RBP20.09■□□□□ 0.81
SBF1-201ENST00000348911 KNSTRNQ9Y448 316 aa20.08■□□□□ 0.81
SBF1-201ENST00000348911 TIMELESSQ9UNS1 1208 aa20.07■□□□□ 0.8
SBF1-201ENST00000348911 NPM1P06748 294 aaKnown RBP eCLIP20.06■□□□□ 0.8
SBF1-201ENST00000348911 CFDP1Q9UEE9 299 aaPredicted RBP20.06■□□□□ 0.8
SBF1-201ENST00000348911 VPS8Q8N3P4 1428 aa20.05■□□□□ 0.8
SBF1-201ENST00000348911 PLEKHD1A6NEE1 506 aa20.05■□□□□ 0.8
SBF1-201ENST00000348911 CDCA8Q53HL2 280 aa20.03■□□□□ 0.8
SBF1-201ENST00000348911 GOLGA6L22H0YM25 854 aa20.02■□□□□ 0.8
SBF1-201ENST00000348911 RTN4Q9NQC3 1192 aaKnown RBP20.02■□□□□ 0.8
SBF1-201ENST00000348911 SETD5Q9C0A6 1442 aa20.02■□□□□ 0.8
SBF1-201ENST00000348911 FHAD1B1AJZ9 1412 aa20.01■□□□□ 0.79
SBF1-201ENST00000348911 RGS3P49796 1198 aa20■□□□□ 0.79
SBF1-201ENST00000348911 CFAP53Q96M91 514 aa19.99■□□□□ 0.79
SBF1-201ENST00000348911 ERICH6BQ5W0A0 696 aa19.97■□□□□ 0.79
SBF1-201ENST00000348911 ABCC8Q09428 1581 aa19.96■□□□□ 0.79
SBF1-201ENST00000348911 DEKP35659 375 aaKnown RBP19.96■□□□□ 0.79
SBF1-201ENST00000348911 FTSJ3Q8IY81 847 aaKnown RBP19.96■□□□□ 0.79
SBF1-201ENST00000348911 NCLP19338 710 aaKnown RBP19.95■□□□□ 0.78
SBF1-201ENST00000348911 CC2D1BQ5T0F9 858 aaKnown RBP19.95■□□□□ 0.78
SBF1-201ENST00000348911 KANK4Q5T7N3 995 aaPredicted RBP19.95■□□□□ 0.78
SBF1-201ENST00000348911 KCNH8Q96L42 1107 aa19.95■□□□□ 0.78
SBF1-201ENST00000348911 HSPA5P11021 654 aaKnown RBP19.94■□□□□ 0.78
SBF1-201ENST00000348911 TSHZ2Q9NRE2 1034 aa19.94■□□□□ 0.78
SBF1-201ENST00000348911 NEUROD2Q15784 382 aa19.92■□□□□ 0.78
SBF1-201ENST00000348911 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
SBF1-201ENST00000348911 PLPPR3Q6T4P5 718 aa19.92■□□□□ 0.78
SBF1-201ENST00000348911 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
SBF1-201ENST00000348911 FRAT1Q92837 279 aaPredicted RBP19.89■□□□□ 0.78
SBF1-201ENST00000348911 CARMIL1Q5VZK9 1371 aa19.89■□□□□ 0.77
SBF1-201ENST00000348911 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
SBF1-201ENST00000348911 RAB3GAP2Q9H2M9 1393 aa19.88■□□□□ 0.77
SBF1-201ENST00000348911 ARHGAP35Q9NRY4 1499 aa19.88■□□□□ 0.77
SBF1-201ENST00000348911 NAP1L5Q96NT1 182 aaPredicted RBP19.86■□□□□ 0.77
SBF1-201ENST00000348911 CASC1Q6TDU7 716 aa19.85■□□□□ 0.77
SBF1-201ENST00000348911 CUX2O14529 1486 aa19.85■□□□□ 0.77
SBF1-201ENST00000348911 PTMAP06454 111 aaKnown RBP19.84■□□□□ 0.77
SBF1-201ENST00000348911 DCAF11Q8TEB1 546 aa19.83■□□□□ 0.77
SBF1-201ENST00000348911 MAPK8IP3Q9UPT6 1336 aa19.82■□□□□ 0.76
SBF1-201ENST00000348911 TMF1P82094 1093 aa19.81■□□□□ 0.76
SBF1-201ENST00000348911 TNNT2P45379 298 aaPredicted RBP19.78■□□□□ 0.76
SBF1-201ENST00000348911 NUDCQ9Y266 331 aa19.78■□□□□ 0.76
SBF1-201ENST00000348911 PPP1R15AO75807 674 aaPredicted RBP19.78■□□□□ 0.76
SBF1-201ENST00000348911 HSP90AB1P08238 724 aaKnown RBP19.77■□□□□ 0.76
SBF1-201ENST00000348911 EIF4G1Q04637 1599 aaKnown RBP19.76■□□□□ 0.75
SBF1-201ENST00000348911 DNTTIP2Q5QJE6 756 aaKnown RBP19.76■□□□□ 0.75
SBF1-201ENST00000348911 MS4A1P11836 297 aa19.75■□□□□ 0.75
SBF1-201ENST00000348911 FOXD1Q16676 465 aa19.75■□□□□ 0.75
SBF1-201ENST00000348911 TPRNQ4KMQ1 711 aa19.73■□□□□ 0.75
SBF1-201ENST00000348911 KTN1Q86UP2 1357 aaKnown RBP19.72■□□□□ 0.75
SBF1-201ENST00000348911 RCAN3Q9UKA8 241 aa19.72■□□□□ 0.75
SBF1-201ENST00000348911 ZBTB7CA1YPR0 619 aa19.71■□□□□ 0.75
SBF1-201ENST00000348911 L1TD1Q5T7N2 865 aaKnown RBP19.71■□□□□ 0.75
SBF1-201ENST00000348911 CHMP4BQ9H444 224 aaKnown RBP19.71■□□□□ 0.75
SBF1-201ENST00000348911 HSCBQ8IWL3 235 aa19.71■□□□□ 0.75
SBF1-201ENST00000348911 TCERG1O14776 1098 aaKnown RBP19.7■□□□□ 0.74
SBF1-201ENST00000348911 MPHOSPH9Q99550 1183 aa19.68■□□□□ 0.74
SBF1-201ENST00000348911 U2SURPO15042 1029 aaKnown RBP19.68■□□□□ 0.74
SBF1-201ENST00000348911 C14orf37Q86TY3 774 aa19.68■□□□□ 0.74
SBF1-201ENST00000348911 PKD2Q13563 968 aa19.68■□□□□ 0.74
SBF1-201ENST00000348911 WIZO95785 1651 aa19.66■□□□□ 0.74
SBF1-201ENST00000348911 SPRYD3Q8NCJ5 442 aa19.66■□□□□ 0.74
SBF1-201ENST00000348911 RALBP1Q15311 655 aa19.66■□□□□ 0.74
SBF1-201ENST00000348911 DHX57Q6P158 1386 aaKnown RBP19.66■□□□□ 0.74
SBF1-201ENST00000348911 IPO9Q96P70 1041 aaKnown RBP19.65■□□□□ 0.74
SBF1-201ENST00000348911 TOP2AP11388 1531 aaKnown RBP19.63■□□□□ 0.73
SBF1-201ENST00000348911 POGKQ9P215 609 aa19.63■□□□□ 0.73
SBF1-201ENST00000348911 ZRSR1Q15695 479 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms