RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 FHAD1B1AJZ9 1412 aa34.85■■■■□ 3.17
TNFRSF10B-202ENST00000347739 EFCAB5A4FU69 1503 aa34.83■■■■□ 3.17
TNFRSF10B-202ENST00000347739 EIF4G3O43432 1585 aaKnown RBP34.8■■■■□ 3.16
TNFRSF10B-202ENST00000347739 APLP2Q06481 763 aa34.79■■■■□ 3.16
TNFRSF10B-202ENST00000347739 HRCP23327 699 aa34.77■■■■□ 3.16
TNFRSF10B-202ENST00000347739 TTBK1Q5TCY1 1321 aaPredicted RBP34.65■■■■□ 3.14
TNFRSF10B-202ENST00000347739 SAMD9Q5K651 1589 aa34.65■■■■□ 3.14
TNFRSF10B-202ENST00000347739 SNAPC4Q5SXM2 1469 aa34.62■■■■□ 3.13
TNFRSF10B-202ENST00000347739 MAP3K1Q13233 1512 aa34.61■■■■□ 3.13
TNFRSF10B-202ENST00000347739 MAGI1Q96QZ7 1491 aaPredicted RBP34.6■■■■□ 3.13
TNFRSF10B-202ENST00000347739 FHOD3Q2V2M9 1422 aa34.55■■■■□ 3.12
TNFRSF10B-202ENST00000347739 IQGAP2Q13576 1575 aa34.54■■■■□ 3.12
TNFRSF10B-202ENST00000347739 PCF11O94913 1555 aaKnown RBP34.52■■■■□ 3.12
TNFRSF10B-202ENST00000347739 TIAM1Q13009 1591 aa34.5■■■■□ 3.11
TNFRSF10B-202ENST00000347739 GRIN2AQ12879 1464 aa34.49■■■■□ 3.11
TNFRSF10B-202ENST00000347739 FYCO1Q9BQS8 1478 aa34.48■■■■□ 3.11
TNFRSF10B-202ENST00000347739 FMN1Q68DA7 1419 aa34.48■■■■□ 3.11
TNFRSF10B-202ENST00000347739 P3H3Q8IVL6 736 aa34.46■■■■□ 3.11
TNFRSF10B-202ENST00000347739 CFAP43Q8NDM7 1665 aa34.45■■■■□ 3.11
TNFRSF10B-202ENST00000347739 CASKIN1Q8WXD9 1431 aa34.45■■■■□ 3.11
TNFRSF10B-202ENST00000347739 SYNJ2O15056 1496 aa34.44■■■■□ 3.1
TNFRSF10B-202ENST00000347739 KANK4Q5T7N3 995 aaPredicted RBP34.43■■■■□ 3.1
TNFRSF10B-202ENST00000347739 KIAA0586Q9BVV6 1533 aa34.4■■■■□ 3.1
TNFRSF10B-202ENST00000347739 UGGT2Q9NYU1 1516 aa34.39■■■■□ 3.1
TNFRSF10B-202ENST00000347739 LRRC9Q6ZRR7 1453 aa34.32■■■■□ 3.08
TNFRSF10B-202ENST00000347739 CEP170Q5SW79 1584 aa34.27■■■■□ 3.08
TNFRSF10B-202ENST00000347739 CHMP7Q8WUX9 453 aaPredicted RBP34.27■■■■□ 3.08
TNFRSF10B-202ENST00000347739 RRBP1Q9P2E9 1410 aaKnown RBP34.24■■■■□ 3.07
TNFRSF10B-202ENST00000347739 NUP160Q12769 1436 aa34.24■■■■□ 3.07
TNFRSF10B-202ENST00000347739 ZEB1P37275 1124 aaPredicted RBP34.22■■■■□ 3.07
TNFRSF10B-202ENST00000347739 KIAA0556O60303 1618 aa34.19■■■■□ 3.06
TNFRSF10B-202ENST00000347739 DISP1Q96F81 1524 aa34.17■■■■□ 3.06
TNFRSF10B-202ENST00000347739 LRRIQ1Q96JM4 1722 aa34.17■■■■□ 3.06
TNFRSF10B-202ENST00000347739 ATP1B4Q9UN42 357 aaPredicted RBP34.12■■■■□ 3.05
TNFRSF10B-202ENST00000347739 HECW1Q76N89 1606 aa34.11■■■■□ 3.05
TNFRSF10B-202ENST00000347739 FBLN2P98095 1184 aa34.07■■■■□ 3.05
TNFRSF10B-202ENST00000347739 CCDC18Q5T9S5 1454 aa34.07■■■■□ 3.05
TNFRSF10B-202ENST00000347739 CCNB3Q8WWL7 1395 aa34.06■■■■□ 3.04
TNFRSF10B-202ENST00000347739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.01■■■■□ 3.04
TNFRSF10B-202ENST00000347739 HNRNPUL2Q1KMD3 747 aaKnown RBP34.01■■■■□ 3.04
TNFRSF10B-202ENST00000347739 PHLDB1Q86UU1 1377 aa33.99■■■■□ 3.03
TNFRSF10B-202ENST00000347739 CHD1O14646 1710 aa33.98■■■■□ 3.03
TNFRSF10B-202ENST00000347739 EHBP1L1Q8N3D4 1523 aa33.96■■■■□ 3.03
TNFRSF10B-202ENST00000347739 CCER1Q8TC90 406 aaPredicted RBP33.95■■■■□ 3.03
TNFRSF10B-202ENST00000347739 MTUS2Q5JR59 1369 aa33.94■■■■□ 3.02
TNFRSF10B-202ENST00000347739 EPRSP07814 1512 aaKnown RBP33.94■■■■□ 3.02
TNFRSF10B-202ENST00000347739 CARMIL2Q6F5E8 1435 aa33.93■■■■□ 3.02
TNFRSF10B-202ENST00000347739 JPH4Q96JJ6 628 aa33.91■■■■□ 3.02
TNFRSF10B-202ENST00000347739 RAPGEF6Q8TEU7 1601 aa33.9■■■■□ 3.02
TNFRSF10B-202ENST00000347739 SUPT6HQ7KZ85 1726 aaKnown RBP33.88■■■■□ 3.01
TNFRSF10B-202ENST00000347739 MAGI3Q5TCQ9 1506 aa33.84■■■■□ 3.01
TNFRSF10B-202ENST00000347739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.83■■■■□ 3.01
TNFRSF10B-202ENST00000347739 ARHGEF11O15085 1522 aa33.81■■■■□ 3
TNFRSF10B-202ENST00000347739 NUP153P49790 1475 aaKnown RBP33.8■■■■□ 3
TNFRSF10B-202ENST00000347739 NCOA2Q15596 1464 aa33.8■■■■□ 3
TNFRSF10B-202ENST00000347739 CDK13Q14004 1512 aaKnown RBP33.8■■■■□ 3
TNFRSF10B-202ENST00000347739 SHROOM2Q13796 1616 aa33.76■■■□□ 2.99
TNFRSF10B-202ENST00000347739 FGD6Q6ZV73 1430 aa33.75■■■□□ 2.99
TNFRSF10B-202ENST00000347739 MYOM3Q5VTT5 1437 aa33.71■■■□□ 2.99
TNFRSF10B-202ENST00000347739 PLB1Q6P1J6 1458 aa33.69■■■□□ 2.98
TNFRSF10B-202ENST00000347739 PRG4Q92954 1404 aaPredicted RBP33.69■■■□□ 2.98
TNFRSF10B-202ENST00000347739 ABCA8O94911 1581 aa33.67■■■□□ 2.98
TNFRSF10B-202ENST00000347739 FAM50AQ14320 339 aaKnown RBP33.63■■■□□ 2.97
TNFRSF10B-202ENST00000347739 CLASP1Q7Z460 1538 aa33.6■■■□□ 2.97
TNFRSF10B-202ENST00000347739 ITGAEP38570 1179 aa33.57■■■□□ 2.96
TNFRSF10B-202ENST00000347739 PTPN23Q9H3S7 1636 aa33.57■■■□□ 2.96
TNFRSF10B-202ENST00000347739 CDK11AQ9UQ88 783 aaPredicted RBP33.56■■■□□ 2.96
TNFRSF10B-202ENST00000347739 TCOF1Q13428 1488 aaKnown RBP33.54■■■□□ 2.96
TNFRSF10B-202ENST00000347739 MIA2Q96PC5 1412 aa33.52■■■□□ 2.96
TNFRSF10B-202ENST00000347739 ARID3CA6NKF2 412 aa33.52■■■□□ 2.96
TNFRSF10B-202ENST00000347739 PTPRGP23470 1445 aa33.52■■■□□ 2.96
TNFRSF10B-202ENST00000347739 TROQ12816 1431 aaPredicted RBP33.51■■■□□ 2.95
TNFRSF10B-202ENST00000347739 ADCY10Q96PN6 1610 aa33.5■■■□□ 2.95
TNFRSF10B-202ENST00000347739 SETD5Q9C0A6 1442 aa33.5■■■□□ 2.95
TNFRSF10B-202ENST00000347739 DHX57Q6P158 1386 aaKnown RBP33.49■■■□□ 2.95
TNFRSF10B-202ENST00000347739 CLSPNQ9HAW4 1339 aa33.49■■■□□ 2.95
TNFRSF10B-202ENST00000347739 RAB3GAP2Q9H2M9 1393 aa33.46■■■□□ 2.95
TNFRSF10B-202ENST00000347739 ATP10BO94823 1461 aa33.42■■■□□ 2.94
TNFRSF10B-202ENST00000347739 ERCC6L2Q5T890 1561 aa33.4■■■□□ 2.94
TNFRSF10B-202ENST00000347739 UACAQ9BZF9 1416 aa33.36■■■□□ 2.93
TNFRSF10B-202ENST00000347739 PTPRKQ15262 1439 aa33.36■■■□□ 2.93
TNFRSF10B-202ENST00000347739 ITSN2Q9NZM3 1697 aa33.35■■■□□ 2.93
TNFRSF10B-202ENST00000347739 KIF14Q15058 1648 aa33.33■■■□□ 2.93
TNFRSF10B-202ENST00000347739 HFM1A2PYH4 1435 aa33.32■■■□□ 2.92
TNFRSF10B-202ENST00000347739 ABCC2Q92887 1545 aa33.29■■■□□ 2.92
TNFRSF10B-202ENST00000347739 PLEKHD1A6NEE1 506 aa33.27■■■□□ 2.92
TNFRSF10B-202ENST00000347739 AKNAQ7Z591 1439 aa33.24■■■□□ 2.91
TNFRSF10B-202ENST00000347739 GPATCH8Q9UKJ3 1502 aaKnown RBP33.23■■■□□ 2.91
TNFRSF10B-202ENST00000347739 ABCC10Q5T3U5 1492 aa33.22■■■□□ 2.91
TNFRSF10B-202ENST00000347739 DNMT1P26358 1616 aaKnown RBP33.21■■■□□ 2.91
TNFRSF10B-202ENST00000347739 NAIPQ13075 1403 aa33.21■■■□□ 2.91
TNFRSF10B-202ENST00000347739 GCC2Q8IWJ2 1684 aa33.19■■■□□ 2.9
TNFRSF10B-202ENST00000347739 UHRF1BP1LA0JNW5 1464 aa33.19■■■□□ 2.9
TNFRSF10B-202ENST00000347739 CDC42BPAQ5VT25 1732 aa33.17■■■□□ 2.9
TNFRSF10B-202ENST00000347739 MAPKBP1O60336 1514 aa33.17■■■□□ 2.9
TNFRSF10B-202ENST00000347739 DAPK1P53355 1430 aa33.14■■■□□ 2.9
TNFRSF10B-202ENST00000347739 CAMSAP2Q08AD1 1489 aa33.13■■■□□ 2.89
TNFRSF10B-202ENST00000347739 CFDP1Q9UEE9 299 aaPredicted RBP33.11■■■□□ 2.89
TNFRSF10B-202ENST00000347739 ABCC5O15440 1437 aa33.09■■■□□ 2.89
TNFRSF10B-202ENST00000347739 ROCK1Q13464 1354 aa33.08■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms