RNA–Protein interactions for RNA: ENST00000346606.10

CSHL1-203, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-203ENST00000346606 FAM69CQ0P6D2 419 aa26.12■■□□□ 1.77
CSHL1-203ENST00000346606 ABCC10Q5T3U5 1492 aa26.08■■□□□ 1.77
CSHL1-203ENST00000346606 RUSC2Q8N2Y8 1516 aa26.04■■□□□ 1.76
CSHL1-203ENST00000346606 NPM1P06748 294 aaKnown RBP eCLIP26.03■■□□□ 1.76
CSHL1-203ENST00000346606 MAPKBP1O60336 1514 aa25.99■■□□□ 1.75
CSHL1-203ENST00000346606 ADCY10Q96PN6 1610 aa25.96■■□□□ 1.75
CSHL1-203ENST00000346606 DIP2BQ9P265 1576 aa25.95■■□□□ 1.74
CSHL1-203ENST00000346606 IGF1RP08069 1367 aa25.95■■□□□ 1.74
CSHL1-203ENST00000346606 KDM4FA0A1W2PPD8 638 aa25.92■■□□□ 1.74
CSHL1-203ENST00000346606 KIAA0586Q9BVV6 1533 aa25.92■■□□□ 1.74
CSHL1-203ENST00000346606 KIF27Q86VH2 1401 aa25.8■■□□□ 1.72
CSHL1-203ENST00000346606 KDM6BO15054 1643 aa25.8■■□□□ 1.72
CSHL1-203ENST00000346606 PTPRGP23470 1445 aa25.79■■□□□ 1.72
CSHL1-203ENST00000346606 TTBK1Q5TCY1 1321 aaPredicted RBP25.75■■□□□ 1.71
CSHL1-203ENST00000346606 CARMIL1Q5VZK9 1371 aa25.71■■□□□ 1.71
CSHL1-203ENST00000346606 CUL7Q14999 1698 aa25.71■■□□□ 1.71
CSHL1-203ENST00000346606 TSPOAP1O95153 1857 aa25.69■■□□□ 1.7
CSHL1-203ENST00000346606 TNIKQ9UKE5 1360 aa25.69■■□□□ 1.7
CSHL1-203ENST00000346606 ABCC2Q92887 1545 aa25.68■■□□□ 1.7
CSHL1-203ENST00000346606 ASXL2Q76L83 1435 aa25.66■■□□□ 1.7
CSHL1-203ENST00000346606 CARMIL2Q6F5E8 1435 aa25.63■■□□□ 1.69
CSHL1-203ENST00000346606 PLB1Q6P1J6 1458 aa25.6■■□□□ 1.69
CSHL1-203ENST00000346606 GLI2P10070 1586 aa25.58■■□□□ 1.69
CSHL1-203ENST00000346606 UHRF1BP1LA0JNW5 1464 aa25.58■■□□□ 1.69
CSHL1-203ENST00000346606 COL17A1Q9UMD9 1497 aaPredicted RBP25.58■■□□□ 1.69
CSHL1-203ENST00000346606 UACAQ9BZF9 1416 aa25.56■■□□□ 1.68
CSHL1-203ENST00000346606 PPRC1Q5VV67 1664 aaKnown RBP25.56■■□□□ 1.68
CSHL1-203ENST00000346606 DISP1Q96F81 1524 aa25.55■■□□□ 1.68
CSHL1-203ENST00000346606 IQGAP2Q13576 1575 aa25.54■■□□□ 1.68
CSHL1-203ENST00000346606 ILDR1Q86SU0 546 aaPredicted RBP25.54■■□□□ 1.68
CSHL1-203ENST00000346606 ADGRL1O94910 1474 aa25.5■■□□□ 1.67
CSHL1-203ENST00000346606 EPRSP07814 1512 aaKnown RBP25.49■■□□□ 1.67
CSHL1-203ENST00000346606 KDM5BQ9UGL1 1544 aa25.48■■□□□ 1.67
CSHL1-203ENST00000346606 UGGT2Q9NYU1 1516 aa25.42■■□□□ 1.66
CSHL1-203ENST00000346606 MAP3K4Q9Y6R4 1608 aa25.4■■□□□ 1.66
CSHL1-203ENST00000346606 RAPGEF2Q9Y4G8 1499 aa25.39■■□□□ 1.65
CSHL1-203ENST00000346606 TEX14Q8IWB6 1497 aa25.36■■□□□ 1.65
CSHL1-203ENST00000346606 ZCCHC11Q5TAX3 1644 aaKnown RBP25.34■■□□□ 1.65
CSHL1-203ENST00000346606 KIAA0556O60303 1618 aa25.33■■□□□ 1.65
CSHL1-203ENST00000346606 WDR7Q9Y4E6 1490 aa25.3■■□□□ 1.64
CSHL1-203ENST00000346606 HECW2Q9P2P5 1572 aa25.27■■□□□ 1.64
CSHL1-203ENST00000346606 CD109Q6YHK3 1445 aa25.23■■□□□ 1.63
CSHL1-203ENST00000346606 KCNH8Q96L42 1107 aa25.22■■□□□ 1.63
CSHL1-203ENST00000346606 MAGI3Q5TCQ9 1506 aa25.21■■□□□ 1.63
CSHL1-203ENST00000346606 ABCA8O94911 1581 aa25.17■■□□□ 1.62
CSHL1-203ENST00000346606 GOLGA3Q08378 1498 aa25.12■■□□□ 1.61
CSHL1-203ENST00000346606 CFAP43Q8NDM7 1665 aa25.08■■□□□ 1.61
CSHL1-203ENST00000346606 ARID3CA6NKF2 412 aa25.06■■□□□ 1.6
CSHL1-203ENST00000346606 PRXQ9BXM0 1461 aa25.06■■□□□ 1.6
CSHL1-203ENST00000346606 CTTNBP2Q8WZ74 1663 aa25.04■■□□□ 1.6
CSHL1-203ENST00000346606 ARAP3Q8WWN8 1544 aa25.02■■□□□ 1.6
CSHL1-203ENST00000346606 ATP10BO94823 1461 aa25.02■■□□□ 1.6
CSHL1-203ENST00000346606 P3H3Q8IVL6 736 aa25.01■■□□□ 1.59
CSHL1-203ENST00000346606 KIF21BO75037 1637 aa24.99■■□□□ 1.59
CSHL1-203ENST00000346606 RAPGEF3O95398 923 aa24.95■■□□□ 1.58
CSHL1-203ENST00000346606 PHLDB1Q86UU1 1377 aa24.9■■□□□ 1.58
CSHL1-203ENST00000346606 PTPRMP28827 1452 aa24.89■■□□□ 1.58
CSHL1-203ENST00000346606 FBXO41Q8TF61 875 aa24.88■■□□□ 1.57
CSHL1-203ENST00000346606 ABCA9Q8IUA7 1624 aa24.87■■□□□ 1.57
CSHL1-203ENST00000346606 ADAMTSL3P82987 1691 aa24.85■■□□□ 1.57
CSHL1-203ENST00000346606 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
CSHL1-203ENST00000346606 NEO1Q92859 1461 aa24.83■■□□□ 1.56
CSHL1-203ENST00000346606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.79■■□□□ 1.56
CSHL1-203ENST00000346606 HNRNPUL2Q1KMD3 747 aaKnown RBP24.79■■□□□ 1.56
CSHL1-203ENST00000346606 SAMD9Q5K651 1589 aa24.78■■□□□ 1.56
CSHL1-203ENST00000346606 FRMPD1Q5SYB0 1578 aa24.78■■□□□ 1.56
CSHL1-203ENST00000346606 CSRNP3Q8WYN3 585 aa24.77■■□□□ 1.56
CSHL1-203ENST00000346606 ARID4BQ4LE39 1312 aaPredicted RBP24.76■■□□□ 1.55
CSHL1-203ENST00000346606 NUP153P49790 1475 aaKnown RBP24.76■■□□□ 1.55
CSHL1-203ENST00000346606 RAPGEF6Q8TEU7 1601 aa24.75■■□□□ 1.55
CSHL1-203ENST00000346606 LMTK3Q96Q04 1460 aa24.72■■□□□ 1.55
CSHL1-203ENST00000346606 BCORL1Q5H9F3 1711 aa24.72■■□□□ 1.55
CSHL1-203ENST00000346606 MADDQ8WXG6 1647 aa24.71■■□□□ 1.55
CSHL1-203ENST00000346606 PCF11O94913 1555 aaKnown RBP24.7■■□□□ 1.54
CSHL1-203ENST00000346606 RANGAP1P46060 587 aaPredicted RBP24.69■■□□□ 1.54
CSHL1-203ENST00000346606 FHOD3Q2V2M9 1422 aa24.68■■□□□ 1.54
CSHL1-203ENST00000346606 DENND4BO75064 1496 aaPredicted RBP24.66■■□□□ 1.54
CSHL1-203ENST00000346606 PLEKHD1A6NEE1 506 aa24.66■■□□□ 1.54
CSHL1-203ENST00000346606 AKNAQ7Z591 1439 aa24.65■■□□□ 1.54
CSHL1-203ENST00000346606 ARHGEF40Q8TER5 1519 aa24.63■■□□□ 1.53
CSHL1-203ENST00000346606 HSPA2P54652 639 aa24.63■■□□□ 1.53
CSHL1-203ENST00000346606 FANCAO15360 1455 aa24.61■■□□□ 1.53
CSHL1-203ENST00000346606 YEATS2Q9ULM3 1422 aa24.59■■□□□ 1.53
CSHL1-203ENST00000346606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.58■■□□□ 1.53
CSHL1-203ENST00000346606 PLPPR3Q6T4P5 718 aa24.58■■□□□ 1.53
CSHL1-203ENST00000346606 RICTORQ6R327 1708 aa24.57■■□□□ 1.52
CSHL1-203ENST00000346606 RIMS1Q86UR5 1692 aaKnown RBP24.56■■□□□ 1.52
CSHL1-203ENST00000346606 SIGLEC1Q9BZZ2 1709 aa24.53■■□□□ 1.52
CSHL1-203ENST00000346606 ZMYM4Q5VZL5 1548 aa24.52■■□□□ 1.52
CSHL1-203ENST00000346606 POGZQ7Z3K3 1410 aa24.52■■□□□ 1.52
CSHL1-203ENST00000346606 TTC37Q6PGP7 1564 aa24.51■■□□□ 1.51
CSHL1-203ENST00000346606 MLECQ14165 292 aa24.51■■□□□ 1.51
CSHL1-203ENST00000346606 ZFYVE16Q7Z3T8 1539 aa24.5■■□□□ 1.51
CSHL1-203ENST00000346606 EEA1Q15075 1411 aa24.48■■□□□ 1.51
CSHL1-203ENST00000346606 MAGI2Q86UL8 1455 aa24.47■■□□□ 1.51
CSHL1-203ENST00000346606 SCAPERQ9BY12 1400 aa24.46■■□□□ 1.51
CSHL1-203ENST00000346606 CFAP74Q9C0B2 1584 aa24.46■■□□□ 1.51
CSHL1-203ENST00000346606 EFCAB5A4FU69 1503 aa24.45■■□□□ 1.51
CSHL1-203ENST00000346606 CDK13Q14004 1512 aaKnown RBP24.45■■□□□ 1.51
CSHL1-203ENST00000346606 PLCH2O75038 1416 aa24.45■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms