RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 PBRM1Q86U86 1689 aa21.48■■□□□ 1.03
CDK5RAP1-202ENST00000346416 IFT140Q96RY7 1462 aa21.47■■□□□ 1.03
CDK5RAP1-202ENST00000346416 P3H3Q8IVL6 736 aa21.47■■□□□ 1.03
CDK5RAP1-202ENST00000346416 EFCAB5A4FU69 1503 aa21.47■■□□□ 1.03
CDK5RAP1-202ENST00000346416 CCER1Q8TC90 406 aaPredicted RBP21.46■■□□□ 1.03
CDK5RAP1-202ENST00000346416 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
CDK5RAP1-202ENST00000346416 FHOD3Q2V2M9 1422 aa21.43■■□□□ 1.02
CDK5RAP1-202ENST00000346416 ZNF608Q9ULD9 1512 aaPredicted RBP21.42■■□□□ 1.02
CDK5RAP1-202ENST00000346416 GRIN2BQ13224 1484 aa21.41■■□□□ 1.02
CDK5RAP1-202ENST00000346416 HNRNPUL2Q1KMD3 747 aaKnown RBP21.41■■□□□ 1.02
CDK5RAP1-202ENST00000346416 MAP3K1Q13233 1512 aa21.4■■□□□ 1.02
CDK5RAP1-202ENST00000346416 THOC2Q8NI27 1593 aaKnown RBP21.4■■□□□ 1.02
CDK5RAP1-202ENST00000346416 ADAMTS12P58397 1594 aa21.39■■□□□ 1.01
CDK5RAP1-202ENST00000346416 TIAM1Q13009 1591 aa21.39■■□□□ 1.01
CDK5RAP1-202ENST00000346416 PCF11O94913 1555 aaKnown RBP21.37■■□□□ 1.01
CDK5RAP1-202ENST00000346416 SAMD9Q5K651 1589 aa21.34■■□□□ 1.01
CDK5RAP1-202ENST00000346416 FYCO1Q9BQS8 1478 aa21.32■■□□□ 1
CDK5RAP1-202ENST00000346416 FMN1Q68DA7 1419 aa21.31■■□□□ 1
CDK5RAP1-202ENST00000346416 CASKIN1Q8WXD9 1431 aa21.31■■□□□ 1
CDK5RAP1-202ENST00000346416 RRBP1Q9P2E9 1410 aaKnown RBP21.31■■□□□ 1
CDK5RAP1-202ENST00000346416 EIF4G3O43432 1585 aaKnown RBP21.3■■□□□ 1
CDK5RAP1-202ENST00000346416 LRRC9Q6ZRR7 1453 aa21.3■■□□□ 1
CDK5RAP1-202ENST00000346416 ATP1B4Q9UN42 357 aaPredicted RBP21.3■■□□□ 1
CDK5RAP1-202ENST00000346416 CFAP43Q8NDM7 1665 aa21.29■■□□□ 1
CDK5RAP1-202ENST00000346416 SNAPC4Q5SXM2 1469 aa21.25■□□□□ 0.99
CDK5RAP1-202ENST00000346416 IQGAP2Q13576 1575 aa21.25■□□□□ 0.99
CDK5RAP1-202ENST00000346416 CCNB3Q8WWL7 1395 aa21.24■□□□□ 0.99
CDK5RAP1-202ENST00000346416 GRIN2AQ12879 1464 aa21.17■□□□□ 0.98
CDK5RAP1-202ENST00000346416 MAGI1Q96QZ7 1491 aaPredicted RBP21.17■□□□□ 0.98
CDK5RAP1-202ENST00000346416 PHLDB1Q86UU1 1377 aa21.16■□□□□ 0.98
CDK5RAP1-202ENST00000346416 KIAA0586Q9BVV6 1533 aa21.14■□□□□ 0.98
CDK5RAP1-202ENST00000346416 UGGT2Q9NYU1 1516 aa21.13■□□□□ 0.97
CDK5RAP1-202ENST00000346416 LRRIQ1Q96JM4 1722 aa21.12■□□□□ 0.97
CDK5RAP1-202ENST00000346416 SYNJ2O15056 1496 aa21.11■□□□□ 0.97
CDK5RAP1-202ENST00000346416 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
CDK5RAP1-202ENST00000346416 ITGAEP38570 1179 aa21.08■□□□□ 0.96
CDK5RAP1-202ENST00000346416 MTUS2Q5JR59 1369 aa21.08■□□□□ 0.96
CDK5RAP1-202ENST00000346416 FBLN2P98095 1184 aa21.05■□□□□ 0.96
CDK5RAP1-202ENST00000346416 DISP1Q96F81 1524 aa21.04■□□□□ 0.96
CDK5RAP1-202ENST00000346416 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
CDK5RAP1-202ENST00000346416 KIAA0556O60303 1618 aa21.02■□□□□ 0.96
CDK5RAP1-202ENST00000346416 HECW1Q76N89 1606 aa21.02■□□□□ 0.96
CDK5RAP1-202ENST00000346416 FAM50AQ14320 339 aaKnown RBP21.02■□□□□ 0.96
CDK5RAP1-202ENST00000346416 CCDC18Q5T9S5 1454 aa21.02■□□□□ 0.96
CDK5RAP1-202ENST00000346416 DHX57Q6P158 1386 aaKnown RBP20.98■□□□□ 0.95
CDK5RAP1-202ENST00000346416 NUP160Q12769 1436 aa20.98■□□□□ 0.95
CDK5RAP1-202ENST00000346416 EHBP1L1Q8N3D4 1523 aa20.98■□□□□ 0.95
CDK5RAP1-202ENST00000346416 EPRSP07814 1512 aaKnown RBP20.97■□□□□ 0.95
CDK5RAP1-202ENST00000346416 NCOA2Q15596 1464 aa20.96■□□□□ 0.95
CDK5RAP1-202ENST00000346416 FGD6Q6ZV73 1430 aa20.96■□□□□ 0.95
CDK5RAP1-202ENST00000346416 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.96■□□□□ 0.95
CDK5RAP1-202ENST00000346416 MAGI3Q5TCQ9 1506 aa20.95■□□□□ 0.94
CDK5RAP1-202ENST00000346416 SUPT6HQ7KZ85 1726 aaKnown RBP20.95■□□□□ 0.94
CDK5RAP1-202ENST00000346416 CLSPNQ9HAW4 1339 aa20.93■□□□□ 0.94
CDK5RAP1-202ENST00000346416 CDK13Q14004 1512 aaKnown RBP20.92■□□□□ 0.94
CDK5RAP1-202ENST00000346416 RAB3GAP2Q9H2M9 1393 aa20.91■□□□□ 0.94
CDK5RAP1-202ENST00000346416 MYOM3Q5VTT5 1437 aa20.9■□□□□ 0.94
CDK5RAP1-202ENST00000346416 JPH4Q96JJ6 628 aa20.9■□□□□ 0.94
CDK5RAP1-202ENST00000346416 SETD5Q9C0A6 1442 aa20.89■□□□□ 0.94
CDK5RAP1-202ENST00000346416 ARID3CA6NKF2 412 aa20.89■□□□□ 0.94
CDK5RAP1-202ENST00000346416 ARHGEF11O15085 1522 aa20.89■□□□□ 0.93
CDK5RAP1-202ENST00000346416 RAPGEF6Q8TEU7 1601 aa20.87■□□□□ 0.93
CDK5RAP1-202ENST00000346416 CARMIL2Q6F5E8 1435 aa20.87■□□□□ 0.93
CDK5RAP1-202ENST00000346416 NUP153P49790 1475 aaKnown RBP20.86■□□□□ 0.93
CDK5RAP1-202ENST00000346416 PTPN23Q9H3S7 1636 aa20.8■□□□□ 0.92
CDK5RAP1-202ENST00000346416 PLB1Q6P1J6 1458 aa20.8■□□□□ 0.92
CDK5RAP1-202ENST00000346416 CHD1O14646 1710 aa20.77■□□□□ 0.92
CDK5RAP1-202ENST00000346416 PTPRKQ15262 1439 aa20.77■□□□□ 0.92
CDK5RAP1-202ENST00000346416 CDK11AQ9UQ88 783 aaPredicted RBP20.76■□□□□ 0.91
CDK5RAP1-202ENST00000346416 TCOF1Q13428 1488 aaKnown RBP20.74■□□□□ 0.91
CDK5RAP1-202ENST00000346416 MIA2Q96PC5 1412 aa20.73■□□□□ 0.91
CDK5RAP1-202ENST00000346416 ZNF316A6NFI3 1004 aaPredicted RBP20.72■□□□□ 0.91
CDK5RAP1-202ENST00000346416 MAPKBP1O60336 1514 aa20.72■□□□□ 0.91
CDK5RAP1-202ENST00000346416 HFM1A2PYH4 1435 aa20.71■□□□□ 0.91
CDK5RAP1-202ENST00000346416 PRG4Q92954 1404 aaPredicted RBP20.71■□□□□ 0.91
CDK5RAP1-202ENST00000346416 ABCA8O94911 1581 aa20.68■□□□□ 0.9
CDK5RAP1-202ENST00000346416 TROQ12816 1431 aaPredicted RBP20.68■□□□□ 0.9
CDK5RAP1-202ENST00000346416 DIEXFQ68CQ4 756 aaKnown RBP20.66■□□□□ 0.9
CDK5RAP1-202ENST00000346416 NAIPQ13075 1403 aa20.66■□□□□ 0.9
CDK5RAP1-202ENST00000346416 PTPRGP23470 1445 aa20.63■□□□□ 0.89
CDK5RAP1-202ENST00000346416 SHROOM2Q13796 1616 aa20.62■□□□□ 0.89
CDK5RAP1-202ENST00000346416 CHIC2Q9UKJ5 165 aa20.61■□□□□ 0.89
CDK5RAP1-202ENST00000346416 ATP10BO94823 1461 aa20.61■□□□□ 0.89
CDK5RAP1-202ENST00000346416 ADCY10Q96PN6 1610 aa20.6■□□□□ 0.89
CDK5RAP1-202ENST00000346416 KIF14Q15058 1648 aa20.59■□□□□ 0.89
CDK5RAP1-202ENST00000346416 RRP7BPQ9NSQ0 103 aa20.58■□□□□ 0.89
CDK5RAP1-202ENST00000346416 UACAQ9BZF9 1416 aa20.58■□□□□ 0.88
CDK5RAP1-202ENST00000346416 PLEKHD1A6NEE1 506 aa20.57■□□□□ 0.88
CDK5RAP1-202ENST00000346416 AKNAQ7Z591 1439 aa20.57■□□□□ 0.88
CDK5RAP1-202ENST00000346416 ZNF644Q9H582 1327 aaPredicted RBP20.57■□□□□ 0.88
CDK5RAP1-202ENST00000346416 GCC2Q8IWJ2 1684 aa20.55■□□□□ 0.88
CDK5RAP1-202ENST00000346416 GPATCH8Q9UKJ3 1502 aaKnown RBP20.55■□□□□ 0.88
CDK5RAP1-202ENST00000346416 SIN3AQ96ST3 1273 aa20.54■□□□□ 0.88
CDK5RAP1-202ENST00000346416 ITSN2Q9NZM3 1697 aa20.54■□□□□ 0.88
CDK5RAP1-202ENST00000346416 DAPK1P53355 1430 aa20.54■□□□□ 0.88
CDK5RAP1-202ENST00000346416 CFDP1Q9UEE9 299 aaPredicted RBP20.54■□□□□ 0.88
CDK5RAP1-202ENST00000346416 DNMT1P26358 1616 aaKnown RBP20.53■□□□□ 0.88
CDK5RAP1-202ENST00000346416 NEUROD1Q13562 356 aa20.52■□□□□ 0.88
CDK5RAP1-202ENST00000346416 ABCC5O15440 1437 aa20.52■□□□□ 0.88
CDK5RAP1-202ENST00000346416 ERCC6L2Q5T890 1561 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms