RNA–Protein interactions for RNA: ENST00000344836.8

USP7-201, Transcript of ubiquitin specific peptidase 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP7, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-201ENST00000344836 TSPY4P0CV99 314 aa23.29■■□□□ 1.32
USP7-201ENST00000344836 TSPY10P0CW01 314 aa23.29■■□□□ 1.32
USP7-201ENST00000344836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.29■■□□□ 1.326e-8■■□□□ 14.2
USP7-201ENST00000344836 SUPT16HQ9Y5B9 1047 aaKnown RBP23.26■■□□□ 1.31
USP7-201ENST00000344836 CEP164Q9UPV0 1460 aa23.23■■□□□ 1.31
USP7-201ENST00000344836 SIN3AQ96ST3 1273 aa23.17■■□□□ 1.3
USP7-201ENST00000344836 ARXQ96QS3 562 aa23.14■■□□□ 1.29
USP7-201ENST00000344836 RB1CC1Q8TDY2 1594 aa23.13■■□□□ 1.29
USP7-201ENST00000344836 SENP3-EIF4A1A0A087X0R7 540 aa23.1■■□□□ 1.29
USP7-201ENST00000344836 KIF27Q86VH2 1401 aa23.08■■□□□ 1.29
USP7-201ENST00000344836 DDRGK1Q96HY6 314 aa23.07■■□□□ 1.28
USP7-201ENST00000344836 PPP4R2Q9NY27 417 aa23.07■■□□□ 1.28
USP7-201ENST00000344836 STAG3Q9UJ98 1225 aa23.07■■□□□ 1.28
USP7-201ENST00000344836 GLIPR1L2Q4G1C9 344 aa23.05■■□□□ 1.28
USP7-201ENST00000344836 CCNB3Q8WWL7 1395 aa23.02■■□□□ 1.28
USP7-201ENST00000344836 SOGA1O94964 1423 aa22.99■■□□□ 1.27
USP7-201ENST00000344836 RGL3Q3MIN7 710 aa22.98■■□□□ 1.27
USP7-201ENST00000344836 CHMP7Q8WUX9 453 aaPredicted RBP22.98■■□□□ 1.27
USP7-201ENST00000344836 ESF1Q9H501 851 aaKnown RBP22.98■■□□□ 1.27
USP7-201ENST00000344836 BECN1Q14457 450 aa22.97■■□□□ 1.27
USP7-201ENST00000344836 CECR2Q9BXF3 1484 aa22.96■■□□□ 1.27
USP7-201ENST00000344836 BAZ1BQ9UIG0 1483 aaKnown RBP22.95■■□□□ 1.26
USP7-201ENST00000344836 CARD11Q9BXL7 1154 aa22.95■■□□□ 1.26
USP7-201ENST00000344836 TIMELESSQ9UNS1 1208 aa22.94■■□□□ 1.26
USP7-201ENST00000344836 NACADO15069 1562 aa22.94■■□□□ 1.26
USP7-201ENST00000344836 NPM1P06748 294 aaKnown RBP eCLIP22.92■■□□□ 1.26
USP7-201ENST00000344836 B4GALNT3Q6L9W6 998 aa22.92■■□□□ 1.26
USP7-201ENST00000344836 PLEKHD1A6NEE1 506 aa22.91■■□□□ 1.26
USP7-201ENST00000344836 PPM1GO15355 546 aaPredicted RBP22.91■■□□□ 1.26
USP7-201ENST00000344836 CFDP1Q9UEE9 299 aaPredicted RBP22.91■■□□□ 1.26
USP7-201ENST00000344836 CCER2I3L3R5 266 aa22.9■■□□□ 1.26
USP7-201ENST00000344836 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
USP7-201ENST00000344836 NOP58Q9Y2X3 529 aaKnown RBP22.89■■□□□ 1.26
USP7-201ENST00000344836 KNSTRNQ9Y448 316 aa22.87■■□□□ 1.25
USP7-201ENST00000344836 MYH16Q9H6N6 1097 aa22.87■■□□□ 1.25
USP7-201ENST00000344836 VPS8Q8N3P4 1428 aa22.86■■□□□ 1.25
USP7-201ENST00000344836 RBM19Q9Y4C8 960 aaKnown RBP22.84■■□□□ 1.25
USP7-201ENST00000344836 LAS1LQ9Y4W2 734 aaKnown RBP22.84■■□□□ 1.25
USP7-201ENST00000344836 CDCA8Q53HL2 280 aa22.83■■□□□ 1.24
USP7-201ENST00000344836 FHAD1B1AJZ9 1412 aa22.81■■□□□ 1.24
USP7-201ENST00000344836 KANK4Q5T7N3 995 aaPredicted RBP22.78■■□□□ 1.24
USP7-201ENST00000344836 KCNH8Q96L42 1107 aa22.78■■□□□ 1.24
USP7-201ENST00000344836 SETD5Q9C0A6 1442 aa22.78■■□□□ 1.24
USP7-201ENST00000344836 TRIM44Q96DX7 344 aaPredicted RBP22.77■■□□□ 1.24
USP7-201ENST00000344836 RGS3P49796 1198 aa22.76■■□□□ 1.23
USP7-201ENST00000344836 CFAP53Q96M91 514 aa22.76■■□□□ 1.23
USP7-201ENST00000344836 GOLGA6L22H0YM25 854 aa22.73■■□□□ 1.23
USP7-201ENST00000344836 CARMIL1Q5VZK9 1371 aa22.71■■□□□ 1.23
USP7-201ENST00000344836 NEUROD2Q15784 382 aa22.71■■□□□ 1.23
USP7-201ENST00000344836 CCDC88BA6NC98 1476 aa22.71■■□□□ 1.23
USP7-201ENST00000344836 HSPA5P11021 654 aaKnown RBP22.71■■□□□ 1.23
USP7-201ENST00000344836 ERICH6BQ5W0A0 696 aa22.7■■□□□ 1.22
USP7-201ENST00000344836 RTN4Q9NQC3 1192 aaKnown RBP22.69■■□□□ 1.22
USP7-201ENST00000344836 CC2D1BQ5T0F9 858 aaKnown RBP22.68■■□□□ 1.22
USP7-201ENST00000344836 FTSJ3Q8IY81 847 aaKnown RBP22.68■■□□□ 1.22
USP7-201ENST00000344836 ABCC8Q09428 1581 aa22.68■■□□□ 1.22
USP7-201ENST00000344836 SENP3Q9H4L4 574 aaPredicted RBP22.68■■□□□ 1.22
USP7-201ENST00000344836 PLPPR3Q6T4P5 718 aa22.67■■□□□ 1.22
USP7-201ENST00000344836 TSHZ2Q9NRE2 1034 aa22.67■■□□□ 1.22
USP7-201ENST00000344836 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
USP7-201ENST00000344836 RAB3GAP2Q9H2M9 1393 aa22.65■■□□□ 1.22
USP7-201ENST00000344836 FRAT1Q92837 279 aaPredicted RBP22.64■■□□□ 1.21
USP7-201ENST00000344836 CUX2O14529 1486 aa22.64■■□□□ 1.21
USP7-201ENST00000344836 DEKP35659 375 aaKnown RBP22.63■■□□□ 1.21
USP7-201ENST00000344836 NCLP19338 710 aaKnown RBP22.62■■□□□ 1.21
USP7-201ENST00000344836 DCAF11Q8TEB1 546 aa22.62■■□□□ 1.21
USP7-201ENST00000344836 PPP1R15AO75807 674 aaPredicted RBP22.58■■□□□ 1.21
USP7-201ENST00000344836 ARHGAP35Q9NRY4 1499 aa22.58■■□□□ 1.2
USP7-201ENST00000344836 TMF1P82094 1093 aa22.56■■□□□ 1.2
USP7-201ENST00000344836 MAPK8IP3Q9UPT6 1336 aa22.55■■□□□ 1.2
USP7-201ENST00000344836 NUDCQ9Y266 331 aa22.54■■□□□ 1.2
USP7-201ENST00000344836 TNNT2P45379 298 aaPredicted RBP22.53■■□□□ 1.2
USP7-201ENST00000344836 FOXD1Q16676 465 aa22.52■■□□□ 1.2
USP7-201ENST00000344836 PTMAP06454 111 aaKnown RBP22.49■■□□□ 1.19
USP7-201ENST00000344836 CASC1Q6TDU7 716 aa22.49■■□□□ 1.19
USP7-201ENST00000344836 MS4A1P11836 297 aa22.48■■□□□ 1.19
USP7-201ENST00000344836 NAP1L5Q96NT1 182 aaPredicted RBP22.48■■□□□ 1.19
USP7-201ENST00000344836 PKD2Q13563 968 aa22.46■■□□□ 1.19
USP7-201ENST00000344836 MPHOSPH9Q99550 1183 aa22.45■■□□□ 1.19
USP7-201ENST00000344836 RCAN3Q9UKA8 241 aa22.45■■□□□ 1.18
USP7-201ENST00000344836 U2SURPO15042 1029 aaKnown RBP22.43■■□□□ 1.18
USP7-201ENST00000344836 HSP90AB1P08238 724 aaKnown RBP22.42■■□□□ 1.18
USP7-201ENST00000344836 CHMP4BQ9H444 224 aaKnown RBP22.42■■□□□ 1.18
USP7-201ENST00000344836 KTN1Q86UP2 1357 aaKnown RBP22.41■■□□□ 1.18
USP7-201ENST00000344836 TCERG1O14776 1098 aaKnown RBP22.41■■□□□ 1.18
USP7-201ENST00000344836 DHX57Q6P158 1386 aaKnown RBP22.4■■□□□ 1.18
USP7-201ENST00000344836 DNTTIP2Q5QJE6 756 aaKnown RBP22.4■■□□□ 1.18
USP7-201ENST00000344836 C14orf37Q86TY3 774 aa22.4■■□□□ 1.18
USP7-201ENST00000344836 EIF4G1Q04637 1599 aaKnown RBP22.4■■□□□ 1.18
USP7-201ENST00000344836 ZBTB7CA1YPR0 619 aa22.38■■□□□ 1.17
USP7-201ENST00000344836 POGKQ9P215 609 aa22.38■■□□□ 1.17
USP7-201ENST00000344836 RALBP1Q15311 655 aa22.37■■□□□ 1.17
USP7-201ENST00000344836 L3MBTL2Q969R5 705 aa22.37■■□□□ 1.17
USP7-201ENST00000344836 TPRNQ4KMQ1 711 aa22.36■■□□□ 1.17
USP7-201ENST00000344836 HSCBQ8IWL3 235 aa22.36■■□□□ 1.17
USP7-201ENST00000344836 FMN1Q68DA7 1419 aa22.34■■□□□ 1.17
USP7-201ENST00000344836 PLEKHG5O94827 1062 aa22.34■■□□□ 1.17
USP7-201ENST00000344836 L1TD1Q5T7N2 865 aaKnown RBP22.33■■□□□ 1.17
USP7-201ENST00000344836 IPO9Q96P70 1041 aaKnown RBP22.32■■□□□ 1.16
USP7-201ENST00000344836 MORC1Q86VD1 984 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms