RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 TOP2BQ02880 1626 aa32.23■■■□□ 2.75
MUC1-204ENST00000343256 KDM4FA0A1W2PPD8 638 aa32.21■■■□□ 2.75
MUC1-204ENST00000343256 NPM1P06748 294 aaKnown RBP eCLIP32.19■■■□□ 2.74
MUC1-204ENST00000343256 DIP2BQ9P265 1576 aa32.19■■■□□ 2.74
MUC1-204ENST00000343256 MAPKBP1O60336 1514 aa32.16■■■□□ 2.74
MUC1-204ENST00000343256 KDM6BO15054 1643 aa32.13■■■□□ 2.73
MUC1-204ENST00000343256 RUSC2Q8N2Y8 1516 aa32.12■■■□□ 2.73
MUC1-204ENST00000343256 ADCY10Q96PN6 1610 aa32.11■■■□□ 2.73
MUC1-204ENST00000343256 ILDR1Q86SU0 546 aaPredicted RBP32.08■■■□□ 2.73
MUC1-204ENST00000343256 SUPT5HO00267 1087 aaKnown RBP32.07■■■□□ 2.72
MUC1-204ENST00000343256 TSPOAP1O95153 1857 aa32.07■■■□□ 2.72
MUC1-204ENST00000343256 KIAA0586Q9BVV6 1533 aa31.85■■■□□ 2.69
MUC1-204ENST00000343256 TTBK1Q5TCY1 1321 aaPredicted RBP31.81■■■□□ 2.68
MUC1-204ENST00000343256 ADGRL1O94910 1474 aa31.74■■■□□ 2.67
MUC1-204ENST00000343256 PTPRGP23470 1445 aa31.74■■■□□ 2.67
MUC1-204ENST00000343256 PPRC1Q5VV67 1664 aaKnown RBP31.71■■■□□ 2.67
MUC1-204ENST00000343256 IGF1RP08069 1367 aa31.7■■■□□ 2.67
MUC1-204ENST00000343256 ASXL2Q76L83 1435 aa31.66■■■□□ 2.66
MUC1-204ENST00000343256 ABCC2Q92887 1545 aa31.66■■■□□ 2.66
MUC1-204ENST00000343256 CUL7Q14999 1698 aa31.64■■■□□ 2.65
MUC1-204ENST00000343256 GLI2P10070 1586 aa31.62■■■□□ 2.65
MUC1-204ENST00000343256 PLB1Q6P1J6 1458 aa31.6■■■□□ 2.65
MUC1-204ENST00000343256 TNIKQ9UKE5 1360 aa31.6■■■□□ 2.65
MUC1-204ENST00000343256 COL17A1Q9UMD9 1497 aaPredicted RBP31.59■■■□□ 2.65
MUC1-204ENST00000343256 KIF27Q86VH2 1401 aa31.58■■■□□ 2.65
MUC1-204ENST00000343256 HECW2Q9P2P5 1572 aa31.57■■■□□ 2.64
MUC1-204ENST00000343256 CARMIL2Q6F5E8 1435 aa31.55■■■□□ 2.64
MUC1-204ENST00000343256 UHRF1BP1LA0JNW5 1464 aa31.48■■■□□ 2.63
MUC1-204ENST00000343256 CARMIL1Q5VZK9 1371 aa31.48■■■□□ 2.63
MUC1-204ENST00000343256 EPRSP07814 1512 aaKnown RBP31.47■■■□□ 2.63
MUC1-204ENST00000343256 UACAQ9BZF9 1416 aa31.47■■■□□ 2.63
MUC1-204ENST00000343256 MAP3K4Q9Y6R4 1608 aa31.45■■■□□ 2.62
MUC1-204ENST00000343256 IQGAP2Q13576 1575 aa31.44■■■□□ 2.62
MUC1-204ENST00000343256 TEX14Q8IWB6 1497 aa31.39■■■□□ 2.62
MUC1-204ENST00000343256 DISP1Q96F81 1524 aa31.38■■■□□ 2.61
MUC1-204ENST00000343256 KDM5BQ9UGL1 1544 aa31.37■■■□□ 2.61
MUC1-204ENST00000343256 ZCCHC11Q5TAX3 1644 aaKnown RBP31.35■■■□□ 2.61
MUC1-204ENST00000343256 WDR7Q9Y4E6 1490 aa31.2■■■□□ 2.58
MUC1-204ENST00000343256 UGGT2Q9NYU1 1516 aa31.19■■■□□ 2.58
MUC1-204ENST00000343256 KIAA0556O60303 1618 aa31.19■■■□□ 2.58
MUC1-204ENST00000343256 CD109Q6YHK3 1445 aa31.12■■■□□ 2.57
MUC1-204ENST00000343256 FBXO41Q8TF61 875 aa31.1■■■□□ 2.57
MUC1-204ENST00000343256 KCNH8Q96L42 1107 aa31.1■■■□□ 2.57
MUC1-204ENST00000343256 KIF21BO75037 1637 aa31.09■■■□□ 2.57
MUC1-204ENST00000343256 MAGI3Q5TCQ9 1506 aa31.08■■■□□ 2.57
MUC1-204ENST00000343256 RAPGEF2Q9Y4G8 1499 aa31.08■■■□□ 2.57
MUC1-204ENST00000343256 CFAP43Q8NDM7 1665 aa31.06■■■□□ 2.56
MUC1-204ENST00000343256 ABCA8O94911 1581 aa30.95■■■□□ 2.54
MUC1-204ENST00000343256 PTPRMP28827 1452 aa30.89■■■□□ 2.53
MUC1-204ENST00000343256 CTTNBP2Q8WZ74 1663 aa30.88■■■□□ 2.53
MUC1-204ENST00000343256 ARAP3Q8WWN8 1544 aa30.87■■■□□ 2.53
MUC1-204ENST00000343256 ARID3CA6NKF2 412 aa30.85■■■□□ 2.53
MUC1-204ENST00000343256 ADAMTSL3P82987 1691 aa30.84■■■□□ 2.53
MUC1-204ENST00000343256 GOLGA3Q08378 1498 aa30.84■■■□□ 2.53
MUC1-204ENST00000343256 RAPGEF3O95398 923 aa30.76■■■□□ 2.51
MUC1-204ENST00000343256 PCF11O94913 1555 aaKnown RBP30.72■■■□□ 2.51
MUC1-204ENST00000343256 ATP10BO94823 1461 aa30.7■■■□□ 2.51
MUC1-204ENST00000343256 MADDQ8WXG6 1647 aa30.7■■■□□ 2.51
MUC1-204ENST00000343256 BCORL1Q5H9F3 1711 aa30.7■■■□□ 2.5
MUC1-204ENST00000343256 ARID4BQ4LE39 1312 aaPredicted RBP30.69■■■□□ 2.5
MUC1-204ENST00000343256 LMTK3Q96Q04 1460 aa30.69■■■□□ 2.5
MUC1-204ENST00000343256 ABCA9Q8IUA7 1624 aa30.69■■■□□ 2.5
MUC1-204ENST00000343256 P3H3Q8IVL6 736 aa30.67■■■□□ 2.5
MUC1-204ENST00000343256 PHLDB1Q86UU1 1377 aa30.66■■■□□ 2.5
MUC1-204ENST00000343256 FRMPD1Q5SYB0 1578 aa30.62■■■□□ 2.49
MUC1-204ENST00000343256 NEO1Q92859 1461 aa30.59■■■□□ 2.49
MUC1-204ENST00000343256 RIMS1Q86UR5 1692 aaKnown RBP30.58■■■□□ 2.49
MUC1-204ENST00000343256 HSPA2P54652 639 aa30.57■■■□□ 2.48
MUC1-204ENST00000343256 PLPPR3Q6T4P5 718 aa30.56■■■□□ 2.48
MUC1-204ENST00000343256 PRXQ9BXM0 1461 aa30.55■■■□□ 2.48
MUC1-204ENST00000343256 FAM9AQ8IZU1 332 aaPredicted RBP30.54■■■□□ 2.48
MUC1-204ENST00000343256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.52■■■□□ 2.48
MUC1-204ENST00000343256 HNRNPUL2Q1KMD3 747 aaKnown RBP30.52■■■□□ 2.48
MUC1-204ENST00000343256 ARHGEF40Q8TER5 1519 aa30.48■■■□□ 2.47
MUC1-204ENST00000343256 RAPGEF6Q8TEU7 1601 aa30.46■■■□□ 2.47
MUC1-204ENST00000343256 CERKQ8TCT0 537 aa30.43■■■□□ 2.46
MUC1-204ENST00000343256 DENND4BO75064 1496 aaPredicted RBP30.41■■■□□ 2.46
MUC1-204ENST00000343256 RICTORQ6R327 1708 aa30.41■■■□□ 2.46
MUC1-204ENST00000343256 SAMD9Q5K651 1589 aa30.39■■■□□ 2.46
MUC1-204ENST00000343256 SIGLEC1Q9BZZ2 1709 aa30.36■■■□□ 2.45
MUC1-204ENST00000343256 AKNAQ7Z591 1439 aa30.35■■■□□ 2.45
MUC1-204ENST00000343256 NUP153P49790 1475 aaKnown RBP30.35■■■□□ 2.45
MUC1-204ENST00000343256 FANCAO15360 1455 aa30.33■■■□□ 2.45
MUC1-204ENST00000343256 FHOD3Q2V2M9 1422 aa30.33■■■□□ 2.45
MUC1-204ENST00000343256 MLECQ14165 292 aa30.33■■■□□ 2.45
MUC1-204ENST00000343256 POGZQ7Z3K3 1410 aa30.32■■■□□ 2.44
MUC1-204ENST00000343256 YEATS2Q9ULM3 1422 aa30.3■■■□□ 2.44
MUC1-204ENST00000343256 ILDR2Q71H61 639 aa30.3■■■□□ 2.44
MUC1-204ENST00000343256 RANGAP1P46060 587 aaPredicted RBP30.28■■■□□ 2.44
MUC1-204ENST00000343256 ZFYVE16Q7Z3T8 1539 aa30.27■■■□□ 2.44
MUC1-204ENST00000343256 DISP3Q9P2K9 1392 aa30.27■■■□□ 2.44
MUC1-204ENST00000343256 ZMYM4Q5VZL5 1548 aa30.26■■■□□ 2.43
MUC1-204ENST00000343256 CFAP74Q9C0B2 1584 aa30.25■■■□□ 2.43
MUC1-204ENST00000343256 PLEKHD1A6NEE1 506 aa30.25■■■□□ 2.43
MUC1-204ENST00000343256 FER1L4A9Z1Z3 1794 aa30.25■■■□□ 2.43
MUC1-204ENST00000343256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.24■■■□□ 2.43
MUC1-204ENST00000343256 EFCAB5A4FU69 1503 aa30.23■■■□□ 2.43
MUC1-204ENST00000343256 TTC37Q6PGP7 1564 aa30.21■■■□□ 2.43
MUC1-204ENST00000343256 HECW1Q76N89 1606 aa30.19■■■□□ 2.42
MUC1-204ENST00000343256 SOCS7O14512 581 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms