RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 FAM9BQ8IZU0 186 aa21.34■■□□□ 1.01
CARMIL3-201ENST00000342740 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
CARMIL3-201ENST00000342740 NEFMP07197 916 aa21.33■■□□□ 1.01
CARMIL3-201ENST00000342740 MIER1Q8N108 512 aa21.33■■□□□ 1.01
CARMIL3-201ENST00000342740 CANXP27824 592 aaKnown RBP21.3■■□□□ 1
CARMIL3-201ENST00000342740 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
CARMIL3-201ENST00000342740 EIF4G2P78344 907 aaKnown RBP eCLIP21.29■■□□□ 1
CARMIL3-201ENST00000342740 TMC1Q8TDI8 760 aa21.24■□□□□ 0.99
CARMIL3-201ENST00000342740 ATAD2BQ9ULI0 1458 aa21.24■□□□□ 0.99
CARMIL3-201ENST00000342740 CCNB3Q8WWL7 1395 aa21.24■□□□□ 0.99
CARMIL3-201ENST00000342740 FKBP8Q14318 412 aa21.24■□□□□ 0.99
CARMIL3-201ENST00000342740 VPS8Q8N3P4 1428 aa21.23■□□□□ 0.99
CARMIL3-201ENST00000342740 RTL5Q5HYW3 569 aaPredicted RBP21.23■□□□□ 0.99
CARMIL3-201ENST00000342740 PLPPR3Q6T4P5 718 aa21.22■□□□□ 0.99
CARMIL3-201ENST00000342740 PDS5BQ9NTI5 1447 aa21.21■□□□□ 0.99
CARMIL3-201ENST00000342740 SLC24A1O60721 1099 aa21.2■□□□□ 0.98
CARMIL3-201ENST00000342740 MRS2Q9HD23 443 aa21.2■□□□□ 0.98
CARMIL3-201ENST00000342740 TDRD9Q8NDG6 1382 aaKnown RBP21.2■□□□□ 0.98
CARMIL3-201ENST00000342740 SALL2Q9Y467 1007 aaPredicted RBP21.19■□□□□ 0.98
CARMIL3-201ENST00000342740 CADPSQ9ULU8 1353 aa21.19■□□□□ 0.98
CARMIL3-201ENST00000342740 ZBTB47Q9UFB7 747 aaPredicted RBP21.19■□□□□ 0.98
CARMIL3-201ENST00000342740 SIN3AQ96ST3 1273 aa21.18■□□□□ 0.98
CARMIL3-201ENST00000342740 RGL3Q3MIN7 710 aa21.18■□□□□ 0.98
CARMIL3-201ENST00000342740 KANK4Q5T7N3 995 aaPredicted RBP21.17■□□□□ 0.98
CARMIL3-201ENST00000342740 EIF4G1Q04637 1599 aaKnown RBP21.16■□□□□ 0.98
CARMIL3-201ENST00000342740 SMARCA4P51532 1647 aa21.16■□□□□ 0.98
CARMIL3-201ENST00000342740 BCL11AQ9H165 835 aa21.11■□□□□ 0.97
CARMIL3-201ENST00000342740 WDR43Q15061 677 aaKnown RBP eCLIP21.03■□□□□ 0.96
CARMIL3-201ENST00000342740 SENP3Q9H4L4 574 aaPredicted RBP21.01■□□□□ 0.95
CARMIL3-201ENST00000342740 CARD11Q9BXL7 1154 aa20.99■□□□□ 0.95
CARMIL3-201ENST00000342740 RAPGEF2Q9Y4G8 1499 aa20.98■□□□□ 0.95
CARMIL3-201ENST00000342740 RUSC2Q8N2Y8 1516 aa20.97■□□□□ 0.95
CARMIL3-201ENST00000342740 FMN1Q68DA7 1419 aa20.97■□□□□ 0.95
CARMIL3-201ENST00000342740 ARHGAP35Q9NRY4 1499 aa20.96■□□□□ 0.95
CARMIL3-201ENST00000342740 SETD5Q9C0A6 1442 aa20.95■□□□□ 0.94
CARMIL3-201ENST00000342740 ANP32AP39687 249 aaKnown RBP20.94■□□□□ 0.94
CARMIL3-201ENST00000342740 SCAF1Q9H7N4 1312 aaKnown RBP20.94■□□□□ 0.94
CARMIL3-201ENST00000342740 TIMELESSQ9UNS1 1208 aa20.93■□□□□ 0.94
CARMIL3-201ENST00000342740 CARMIL2Q6F5E8 1435 aa20.92■□□□□ 0.94
CARMIL3-201ENST00000342740 CCDC136Q96JN2 1154 aa20.92■□□□□ 0.94
CARMIL3-201ENST00000342740 PPP1R15AO75807 674 aaPredicted RBP20.91■□□□□ 0.94
CARMIL3-201ENST00000342740 NPM2Q86SE8 214 aaKnown RBP20.9■□□□□ 0.94
CARMIL3-201ENST00000342740 IRX6P78412 446 aaPredicted RBP20.88■□□□□ 0.93
CARMIL3-201ENST00000342740 FHOD3Q2V2M9 1422 aa20.87■□□□□ 0.93
CARMIL3-201ENST00000342740 CDCA8Q53HL2 280 aa20.86■□□□□ 0.93
CARMIL3-201ENST00000342740 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
CARMIL3-201ENST00000342740 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.86■□□□□ 0.93
CARMIL3-201ENST00000342740 RAB3GAP2Q9H2M9 1393 aa20.84■□□□□ 0.93
CARMIL3-201ENST00000342740 DCAF11Q8TEB1 546 aa20.83■□□□□ 0.93
CARMIL3-201ENST00000342740 KNSTRNQ9Y448 316 aa20.83■□□□□ 0.92
CARMIL3-201ENST00000342740 ARID4BQ4LE39 1312 aaPredicted RBP20.82■□□□□ 0.92
CARMIL3-201ENST00000342740 SENP3-EIF4A1A0A087X0R7 540 aa20.8■□□□□ 0.92
CARMIL3-201ENST00000342740 FOXD1Q16676 465 aa20.79■□□□□ 0.92
CARMIL3-201ENST00000342740 PKD2Q13563 968 aa20.79■□□□□ 0.92
CARMIL3-201ENST00000342740 JPH4Q96JJ6 628 aa20.77■□□□□ 0.92
CARMIL3-201ENST00000342740 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
CARMIL3-201ENST00000342740 MPHOSPH9Q99550 1183 aa20.74■□□□□ 0.91
CARMIL3-201ENST00000342740 IGF1RP08069 1367 aa20.72■□□□□ 0.91
CARMIL3-201ENST00000342740 EFCAB2Q5VUJ9 269 aa20.71■□□□□ 0.91
CARMIL3-201ENST00000342740 KANK1Q14678 1352 aa20.7■□□□□ 0.9
CARMIL3-201ENST00000342740 CFAP53Q96M91 514 aa20.69■□□□□ 0.9
CARMIL3-201ENST00000342740 HSPA5P11021 654 aaKnown RBP20.68■□□□□ 0.9
CARMIL3-201ENST00000342740 UPF2Q9HAU5 1272 aaKnown RBP20.68■□□□□ 0.9
CARMIL3-201ENST00000342740 SUPT16HQ9Y5B9 1047 aaKnown RBP20.68■□□□□ 0.9
CARMIL3-201ENST00000342740 NUP155O75694 1391 aa20.67■□□□□ 0.9
CARMIL3-201ENST00000342740 FGD5Q6ZNL6 1462 aa20.67■□□□□ 0.9
CARMIL3-201ENST00000342740 ANKRD30AQ9BXX3 1397 aa20.66■□□□□ 0.9
CARMIL3-201ENST00000342740 GGT6Q6P531 493 aa20.66■□□□□ 0.9
CARMIL3-201ENST00000342740 POGKQ9P215 609 aa20.66■□□□□ 0.9
CARMIL3-201ENST00000342740 TMF1P82094 1093 aa20.65■□□□□ 0.9
CARMIL3-201ENST00000342740 C14orf37Q86TY3 774 aa20.64■□□□□ 0.89
CARMIL3-201ENST00000342740 HNRNPMP52272 730 aaKnown RBP eCLIP20.63■□□□□ 0.89
CARMIL3-201ENST00000342740 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
CARMIL3-201ENST00000342740 PPM1GO15355 546 aaPredicted RBP20.62■□□□□ 0.89
CARMIL3-201ENST00000342740 PLEKHG5O94827 1062 aa20.62■□□□□ 0.89
CARMIL3-201ENST00000342740 CCDC18Q5T9S5 1454 aa20.61■□□□□ 0.89
CARMIL3-201ENST00000342740 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
CARMIL3-201ENST00000342740 MLECQ14165 292 aa20.59■□□□□ 0.89
CARMIL3-201ENST00000342740 NEUROD2Q15784 382 aa20.58■□□□□ 0.89
CARMIL3-201ENST00000342740 HSP90AA1P07900 732 aaKnown RBP20.58■□□□□ 0.88
CARMIL3-201ENST00000342740 TNNT2P45379 298 aaPredicted RBP20.58■□□□□ 0.88
CARMIL3-201ENST00000342740 GAPVD1Q14C86 1478 aa20.58■□□□□ 0.88
CARMIL3-201ENST00000342740 L3MBTL2Q969R5 705 aa20.57■□□□□ 0.88
CARMIL3-201ENST00000342740 ZBTB7CA1YPR0 619 aa20.57■□□□□ 0.88
CARMIL3-201ENST00000342740 CCER2I3L3R5 266 aa20.56■□□□□ 0.88
CARMIL3-201ENST00000342740 RSPH4AQ5TD94 716 aa20.56■□□□□ 0.88
CARMIL3-201ENST00000342740 DHX57Q6P158 1386 aaKnown RBP20.52■□□□□ 0.88
CARMIL3-201ENST00000342740 KIF3BO15066 747 aa20.52■□□□□ 0.87
CARMIL3-201ENST00000342740 NUDCQ9Y266 331 aa20.52■□□□□ 0.87
CARMIL3-201ENST00000342740 PTPRGP23470 1445 aa20.49■□□□□ 0.87
CARMIL3-201ENST00000342740 SPAG9O60271 1321 aaKnown RBP20.49■□□□□ 0.87
CARMIL3-201ENST00000342740 MYH16Q9H6N6 1097 aa20.48■□□□□ 0.87
CARMIL3-201ENST00000342740 CFTRP13569 1480 aa20.48■□□□□ 0.87
CARMIL3-201ENST00000342740 SAFB2Q14151 953 aaKnown RBP eCLIP20.48■□□□□ 0.87
CARMIL3-201ENST00000342740 MAPK8IP3Q9UPT6 1336 aa20.47■□□□□ 0.87
CARMIL3-201ENST00000342740 TRHP20396 242 aaPredicted RBP20.47■□□□□ 0.87
CARMIL3-201ENST00000342740 ROCK2O75116 1388 aaKnown RBP20.46■□□□□ 0.87
CARMIL3-201ENST00000342740 SRPK2P78362 688 aaKnown RBP20.45■□□□□ 0.86
CARMIL3-201ENST00000342740 U2SURPO15042 1029 aaKnown RBP20.44■□□□□ 0.86
CARMIL3-201ENST00000342740 HDGFP51858 240 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms