RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 TDRD9Q8NDG6 1382 aaKnown RBP20.6■□□□□ 0.89
PCDHB13-201ENST00000341948 ZBTB47Q9UFB7 747 aaPredicted RBP20.6■□□□□ 0.89
PCDHB13-201ENST00000341948 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
PCDHB13-201ENST00000341948 RTL5Q5HYW3 569 aaPredicted RBP20.59■□□□□ 0.89
PCDHB13-201ENST00000341948 PPP1R15AO75807 674 aaPredicted RBP20.59■□□□□ 0.89
PCDHB13-201ENST00000341948 EIF4G1Q04637 1599 aaKnown RBP20.59■□□□□ 0.89
PCDHB13-201ENST00000341948 SOGA1O94964 1423 aa20.58■□□□□ 0.88
PCDHB13-201ENST00000341948 ACIN1Q9UKV3 1341 aaKnown RBP20.58■□□□□ 0.88
PCDHB13-201ENST00000341948 CADPSQ9ULU8 1353 aa20.57■□□□□ 0.88
PCDHB13-201ENST00000341948 DDX10Q13206 875 aaKnown RBP20.54■□□□□ 0.88
PCDHB13-201ENST00000341948 BCL11AQ9H165 835 aa20.54■□□□□ 0.88
PCDHB13-201ENST00000341948 RGL3Q3MIN7 710 aa20.53■□□□□ 0.88
PCDHB13-201ENST00000341948 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
PCDHB13-201ENST00000341948 FHAD1B1AJZ9 1412 aa20.46■□□□□ 0.87
PCDHB13-201ENST00000341948 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
PCDHB13-201ENST00000341948 SCAF1Q9H7N4 1312 aaKnown RBP20.46■□□□□ 0.87
PCDHB13-201ENST00000341948 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
PCDHB13-201ENST00000341948 C14orf37Q86TY3 774 aa20.45■□□□□ 0.86
PCDHB13-201ENST00000341948 WIZO95785 1651 aa20.45■□□□□ 0.86
PCDHB13-201ENST00000341948 TOP2AP11388 1531 aaKnown RBP20.43■□□□□ 0.86
PCDHB13-201ENST00000341948 CARMIL2Q6F5E8 1435 aa20.42■□□□□ 0.86
PCDHB13-201ENST00000341948 HIRIP3Q9BW71 556 aaPredicted RBP20.4■□□□□ 0.86
PCDHB13-201ENST00000341948 FAM9BQ8IZU0 186 aa20.39■□□□□ 0.85
PCDHB13-201ENST00000341948 PLEKHG5O94827 1062 aa20.38■□□□□ 0.85
PCDHB13-201ENST00000341948 EIF4G2P78344 907 aaKnown RBP eCLIP20.37■□□□□ 0.85
PCDHB13-201ENST00000341948 TMC1Q8TDI8 760 aa20.37■□□□□ 0.85
PCDHB13-201ENST00000341948 HNRNPUQ00839 825 aaKnown RBP eCLIP20.37■□□□□ 0.85
PCDHB13-201ENST00000341948 SALL2Q9Y467 1007 aaPredicted RBP20.36■□□□□ 0.85
PCDHB13-201ENST00000341948 MLECQ14165 292 aa20.35■□□□□ 0.85
PCDHB13-201ENST00000341948 SMARCA4P51532 1647 aa20.32■□□□□ 0.84
PCDHB13-201ENST00000341948 ZBTB7CA1YPR0 619 aa20.29■□□□□ 0.84
PCDHB13-201ENST00000341948 WDR43Q15061 677 aaKnown RBP eCLIP20.28■□□□□ 0.84
PCDHB13-201ENST00000341948 FKBP8Q14318 412 aa20.27■□□□□ 0.84
PCDHB13-201ENST00000341948 FANCD2Q9BXW9 1451 aa20.25■□□□□ 0.83
PCDHB13-201ENST00000341948 JPH4Q96JJ6 628 aa20.24■□□□□ 0.83
PCDHB13-201ENST00000341948 MRS2Q9HD23 443 aa20.24■□□□□ 0.83
PCDHB13-201ENST00000341948 A0A0G2JS52 829 aa20.23■□□□□ 0.83
PCDHB13-201ENST00000341948 GGT6Q6P531 493 aa20.23■□□□□ 0.83
PCDHB13-201ENST00000341948 CARD11Q9BXL7 1154 aa20.22■□□□□ 0.83
PCDHB13-201ENST00000341948 EFCAB2Q5VUJ9 269 aa20.21■□□□□ 0.83
PCDHB13-201ENST00000341948 KANK1Q14678 1352 aa20.19■□□□□ 0.82
PCDHB13-201ENST00000341948 ANP32AP39687 249 aaKnown RBP20.19■□□□□ 0.82
PCDHB13-201ENST00000341948 HAP1P54257 671 aaPredicted RBP20.18■□□□□ 0.82
PCDHB13-201ENST00000341948 SIN3AQ96ST3 1273 aa20.18■□□□□ 0.82
PCDHB13-201ENST00000341948 POGKQ9P215 609 aa20.18■□□□□ 0.82
PCDHB13-201ENST00000341948 FMN1Q68DA7 1419 aa20.18■□□□□ 0.82
PCDHB13-201ENST00000341948 MIER1Q8N108 512 aa20.18■□□□□ 0.82
PCDHB13-201ENST00000341948 VPS8Q8N3P4 1428 aa20.18■□□□□ 0.82
PCDHB13-201ENST00000341948 CDCA8Q53HL2 280 aa20.17■□□□□ 0.82
PCDHB13-201ENST00000341948 KANK4Q5T7N3 995 aaPredicted RBP20.17■□□□□ 0.82
PCDHB13-201ENST00000341948 RAPGEF2Q9Y4G8 1499 aa20.16■□□□□ 0.82
PCDHB13-201ENST00000341948 ARHGAP35Q9NRY4 1499 aa20.11■□□□□ 0.81
PCDHB13-201ENST00000341948 LMOD2Q6P5Q4 547 aa20.1■□□□□ 0.81
PCDHB13-201ENST00000341948 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
PCDHB13-201ENST00000341948 HDGFP51858 240 aaKnown RBP20.1■□□□□ 0.81
PCDHB13-201ENST00000341948 KNSTRNQ9Y448 316 aa20.1■□□□□ 0.81
PCDHB13-201ENST00000341948 DCAF11Q8TEB1 546 aa20.09■□□□□ 0.81
PCDHB13-201ENST00000341948 CYB5RLQ6IPT4 315 aa20.09■□□□□ 0.81
PCDHB13-201ENST00000341948 PPM1GO15355 546 aaPredicted RBP20.08■□□□□ 0.81
PCDHB13-201ENST00000341948 NPM2Q86SE8 214 aaKnown RBP20.08■□□□□ 0.8
PCDHB13-201ENST00000341948 FHOD3Q2V2M9 1422 aa20.08■□□□□ 0.8
PCDHB13-201ENST00000341948 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
PCDHB13-201ENST00000341948 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.04■□□□□ 0.8
PCDHB13-201ENST00000341948 CFAP53Q96M91 514 aa20.04■□□□□ 0.8
PCDHB13-201ENST00000341948 PKD2Q13563 968 aa20.03■□□□□ 0.8
PCDHB13-201ENST00000341948 CCDC136Q96JN2 1154 aa20.02■□□□□ 0.8
PCDHB13-201ENST00000341948 HNRNPMP52272 730 aaKnown RBP eCLIP20.01■□□□□ 0.79
PCDHB13-201ENST00000341948 KIF3BO15066 747 aa20■□□□□ 0.79
PCDHB13-201ENST00000341948 PTPRGP23470 1445 aa19.98■□□□□ 0.79
PCDHB13-201ENST00000341948 SETD5Q9C0A6 1442 aa19.96■□□□□ 0.79
PCDHB13-201ENST00000341948 FOXD1Q16676 465 aa19.96■□□□□ 0.79
PCDHB13-201ENST00000341948 SPAG9O60271 1321 aaKnown RBP19.96■□□□□ 0.79
PCDHB13-201ENST00000341948 ANKRD30AQ9BXX3 1397 aa19.96■□□□□ 0.79
PCDHB13-201ENST00000341948 NUP155O75694 1391 aa19.95■□□□□ 0.78
PCDHB13-201ENST00000341948 SAFB2Q14151 953 aaKnown RBP eCLIP19.95■□□□□ 0.78
PCDHB13-201ENST00000341948 UPF2Q9HAU5 1272 aaKnown RBP19.95■□□□□ 0.78
PCDHB13-201ENST00000341948 FGD5Q6ZNL6 1462 aa19.95■□□□□ 0.78
PCDHB13-201ENST00000341948 GAPVD1Q14C86 1478 aa19.94■□□□□ 0.78
PCDHB13-201ENST00000341948 RAD54L2Q9Y4B4 1467 aa19.94■□□□□ 0.78
PCDHB13-201ENST00000341948 RUSC2Q8N2Y8 1516 aa19.93■□□□□ 0.78
PCDHB13-201ENST00000341948 TNNT2P45379 298 aaPredicted RBP19.92■□□□□ 0.78
PCDHB13-201ENST00000341948 RSPH4AQ5TD94 716 aa19.92■□□□□ 0.78
PCDHB13-201ENST00000341948 STK26Q9P289 416 aa19.91■□□□□ 0.78
PCDHB13-201ENST00000341948 SRPK2P78362 688 aaKnown RBP19.91■□□□□ 0.78
PCDHB13-201ENST00000341948 SENP3-EIF4A1A0A087X0R7 540 aa19.91■□□□□ 0.78
PCDHB13-201ENST00000341948 TMF1P82094 1093 aa19.9■□□□□ 0.78
PCDHB13-201ENST00000341948 CCDC18Q5T9S5 1454 aa19.9■□□□□ 0.78
PCDHB13-201ENST00000341948 MPHOSPH9Q99550 1183 aa19.88■□□□□ 0.77
PCDHB13-201ENST00000341948 IGF1RP08069 1367 aa19.88■□□□□ 0.77
PCDHB13-201ENST00000341948 NUDCQ9Y266 331 aa19.87■□□□□ 0.77
PCDHB13-201ENST00000341948 IRX6P78412 446 aaPredicted RBP19.87■□□□□ 0.77
PCDHB13-201ENST00000341948 WASHC2CQ9Y4E1 1318 aa19.87■□□□□ 0.77
PCDHB13-201ENST00000341948 HSP90AA1P07900 732 aaKnown RBP19.86■□□□□ 0.77
PCDHB13-201ENST00000341948 NEUROD2Q15784 382 aa19.86■□□□□ 0.77
PCDHB13-201ENST00000341948 AQRO60306 1485 aaKnown RBP eCLIP19.86■□□□□ 0.77
PCDHB13-201ENST00000341948 TIMELESSQ9UNS1 1208 aa19.85■□□□□ 0.77
PCDHB13-201ENST00000341948 CC2D1BQ5T0F9 858 aaKnown RBP19.84■□□□□ 0.77
PCDHB13-201ENST00000341948 ARXQ96QS3 562 aa19.84■□□□□ 0.77
PCDHB13-201ENST00000341948 SOX12O15370 315 aa19.83■□□□□ 0.77
PCDHB13-201ENST00000341948 MAPK8IP3Q9UPT6 1336 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms