RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 CADPSQ9ULU8 1353 aa26.86■■□□□ 1.89
SEMA6C-201ENST00000341697 EIF4G1Q04637 1599 aaKnown RBP26.86■■□□□ 1.89
SEMA6C-201ENST00000341697 ABCC8Q09428 1581 aa26.85■■□□□ 1.89
SEMA6C-201ENST00000341697 FHAD1B1AJZ9 1412 aa26.85■■□□□ 1.89
SEMA6C-201ENST00000341697 CANXP27824 592 aaKnown RBP26.8■■□□□ 1.88
SEMA6C-201ENST00000341697 DDX10Q13206 875 aaKnown RBP26.78■■□□□ 1.88
SEMA6C-201ENST00000341697 SMARCA4P51532 1647 aa26.77■■□□□ 1.88
SEMA6C-201ENST00000341697 ZBTB47Q9UFB7 747 aaPredicted RBP26.77■■□□□ 1.88
SEMA6C-201ENST00000341697 TDRD9Q8NDG6 1382 aaKnown RBP26.76■■□□□ 1.87
SEMA6C-201ENST00000341697 CCNB3Q8WWL7 1395 aa26.69■■□□□ 1.86
SEMA6C-201ENST00000341697 GTF3C3Q9Y5Q9 886 aa26.65■■□□□ 1.86
SEMA6C-201ENST00000341697 ARID4BQ4LE39 1312 aaPredicted RBP26.64■■□□□ 1.86
SEMA6C-201ENST00000341697 CARMIL2Q6F5E8 1435 aa26.64■■□□□ 1.85
SEMA6C-201ENST00000341697 PPP1R15AO75807 674 aaPredicted RBP26.63■■□□□ 1.85
SEMA6C-201ENST00000341697 EIF4G2P78344 907 aaKnown RBP eCLIP26.61■■□□□ 1.85
SEMA6C-201ENST00000341697 RGL3Q3MIN7 710 aa26.59■■□□□ 1.85
SEMA6C-201ENST00000341697 FAM9BQ8IZU0 186 aa26.55■■□□□ 1.84
SEMA6C-201ENST00000341697 TMC1Q8TDI8 760 aa26.55■■□□□ 1.84
SEMA6C-201ENST00000341697 VPS8Q8N3P4 1428 aa26.53■■□□□ 1.84
SEMA6C-201ENST00000341697 HNRNPUQ00839 825 aaKnown RBP eCLIP26.52■■□□□ 1.84
SEMA6C-201ENST00000341697 HIRIP3Q9BW71 556 aaPredicted RBP26.49■■□□□ 1.83
SEMA6C-201ENST00000341697 FANCD2Q9BXW9 1451 aa26.48■■□□□ 1.83
SEMA6C-201ENST00000341697 SENP3Q9H4L4 574 aaPredicted RBP26.48■■□□□ 1.83
SEMA6C-201ENST00000341697 FMN1Q68DA7 1419 aa26.46■■□□□ 1.83
SEMA6C-201ENST00000341697 BCL11AQ9H165 835 aa26.46■■□□□ 1.83
SEMA6C-201ENST00000341697 RAPGEF2Q9Y4G8 1499 aa26.44■■□□□ 1.82
SEMA6C-201ENST00000341697 WDR43Q15061 677 aaKnown RBP eCLIP26.43■■□□□ 1.82
SEMA6C-201ENST00000341697 MRS2Q9HD23 443 aa26.41■■□□□ 1.82
SEMA6C-201ENST00000341697 ARHGAP35Q9NRY4 1499 aa26.39■■□□□ 1.81
SEMA6C-201ENST00000341697 SALL2Q9Y467 1007 aaPredicted RBP26.39■■□□□ 1.81
SEMA6C-201ENST00000341697 TRHP20396 242 aaPredicted RBP26.38■■□□□ 1.81
SEMA6C-201ENST00000341697 RTL5Q5HYW3 569 aaPredicted RBP26.36■■□□□ 1.81
SEMA6C-201ENST00000341697 KANK4Q5T7N3 995 aaPredicted RBP26.34■■□□□ 1.81
SEMA6C-201ENST00000341697 C14orf37Q86TY3 774 aa26.34■■□□□ 1.81
SEMA6C-201ENST00000341697 CDCA8Q53HL2 280 aa26.34■■□□□ 1.81
SEMA6C-201ENST00000341697 CARD11Q9BXL7 1154 aa26.34■■□□□ 1.81
SEMA6C-201ENST00000341697 KANK1Q14678 1352 aa26.32■■□□□ 1.8
SEMA6C-201ENST00000341697 SIN3AQ96ST3 1273 aa26.31■■□□□ 1.8
SEMA6C-201ENST00000341697 NCAPD3P42695 1498 aa26.31■■□□□ 1.8
SEMA6C-201ENST00000341697 SCAF1Q9H7N4 1312 aaKnown RBP26.31■■□□□ 1.8
SEMA6C-201ENST00000341697 MYT1Q01538 1121 aa26.29■■□□□ 1.8
SEMA6C-201ENST00000341697 JPH4Q96JJ6 628 aa26.28■■□□□ 1.8
SEMA6C-201ENST00000341697 EFCAB2Q5VUJ9 269 aa26.26■■□□□ 1.79
SEMA6C-201ENST00000341697 FHOD3Q2V2M9 1422 aa26.23■■□□□ 1.79
SEMA6C-201ENST00000341697 FKBP8Q14318 412 aa26.21■■□□□ 1.79
SEMA6C-201ENST00000341697 MIER1Q8N108 512 aa26.21■■□□□ 1.79
SEMA6C-201ENST00000341697 SETD5Q9C0A6 1442 aa26.2■■□□□ 1.79
SEMA6C-201ENST00000341697 MLECQ14165 292 aa26.19■■□□□ 1.78
SEMA6C-201ENST00000341697 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.18■■□□□ 1.78
SEMA6C-201ENST00000341697 KNSTRNQ9Y448 316 aa26.18■■□□□ 1.78
SEMA6C-201ENST00000341697 POGKQ9P215 609 aa26.17■■□□□ 1.78
SEMA6C-201ENST00000341697 GGT6Q6P531 493 aa26.15■■□□□ 1.78
SEMA6C-201ENST00000341697 ZBTB7CA1YPR0 619 aa26.14■■□□□ 1.77
SEMA6C-201ENST00000341697 DCAF11Q8TEB1 546 aa26.14■■□□□ 1.77
SEMA6C-201ENST00000341697 FGD5Q6ZNL6 1462 aa26.13■■□□□ 1.77
SEMA6C-201ENST00000341697 TIMELESSQ9UNS1 1208 aa26.12■■□□□ 1.77
SEMA6C-201ENST00000341697 PLEKHG5O94827 1062 aa26.12■■□□□ 1.77
SEMA6C-201ENST00000341697 RUSC2Q8N2Y8 1516 aa26.12■■□□□ 1.77
SEMA6C-201ENST00000341697 HDGFP51858 240 aaKnown RBP26.1■■□□□ 1.77
SEMA6C-201ENST00000341697 CFAP53Q96M91 514 aa26.1■■□□□ 1.77
SEMA6C-201ENST00000341697 ANKRD30AQ9BXX3 1397 aa26.09■■□□□ 1.77
SEMA6C-201ENST00000341697 PKD2Q13563 968 aa26.08■■□□□ 1.77
SEMA6C-201ENST00000341697 GAPVD1Q14C86 1478 aa26.07■■□□□ 1.76
SEMA6C-201ENST00000341697 CCDC18Q5T9S5 1454 aa26.07■■□□□ 1.76
SEMA6C-201ENST00000341697 RSPH4AQ5TD94 716 aa26.03■■□□□ 1.76
SEMA6C-201ENST00000341697 RAD54L2Q9Y4B4 1467 aa26.02■■□□□ 1.76
SEMA6C-201ENST00000341697 ANP32AP39687 249 aaKnown RBP26.01■■□□□ 1.75
SEMA6C-201ENST00000341697 IGF1RP08069 1367 aa26.01■■□□□ 1.75
SEMA6C-201ENST00000341697 PTPRGP23470 1445 aa26■■□□□ 1.75
SEMA6C-201ENST00000341697 HAP1P54257 671 aaPredicted RBP26■■□□□ 1.75
SEMA6C-201ENST00000341697 NUP155O75694 1391 aa26■■□□□ 1.75
SEMA6C-201ENST00000341697 HNRNPMP52272 730 aaKnown RBP eCLIP26■■□□□ 1.75
SEMA6C-201ENST00000341697 OSCARQ8IYS5 282 aa25.99■■□□□ 1.75
SEMA6C-201ENST00000341697 CCDC136Q96JN2 1154 aa25.98■■□□□ 1.75
SEMA6C-201ENST00000341697 PPM1GO15355 546 aaPredicted RBP25.97■■□□□ 1.75
SEMA6C-201ENST00000341697 TMF1P82094 1093 aa25.97■■□□□ 1.75
SEMA6C-201ENST00000341697 RAB3GAP2Q9H2M9 1393 aa25.97■■□□□ 1.75
SEMA6C-201ENST00000341697 MPHOSPH9Q99550 1183 aa25.96■■□□□ 1.75
SEMA6C-201ENST00000341697 A0A0G2JS52 829 aa25.95■■□□□ 1.75
SEMA6C-201ENST00000341697 SPAG9O60271 1321 aaKnown RBP25.94■■□□□ 1.74
SEMA6C-201ENST00000341697 FOXD1Q16676 465 aa25.94■■□□□ 1.74
SEMA6C-201ENST00000341697 KIF3BO15066 747 aa25.93■■□□□ 1.74
SEMA6C-201ENST00000341697 NPM2Q86SE8 214 aaKnown RBP25.92■■□□□ 1.74
SEMA6C-201ENST00000341697 UPF2Q9HAU5 1272 aaKnown RBP25.9■■□□□ 1.74
SEMA6C-201ENST00000341697 NUDCQ9Y266 331 aa25.88■■□□□ 1.73
SEMA6C-201ENST00000341697 CFTRP13569 1480 aa25.88■■□□□ 1.73
SEMA6C-201ENST00000341697 LMOD2Q6P5Q4 547 aa25.88■■□□□ 1.73
SEMA6C-201ENST00000341697 AQRO60306 1485 aaKnown RBP eCLIP25.86■■□□□ 1.73
SEMA6C-201ENST00000341697 CC2D2AQ9P2K1 1620 aa25.85■■□□□ 1.73
SEMA6C-201ENST00000341697 CYB5RLQ6IPT4 315 aa25.84■■□□□ 1.73
SEMA6C-201ENST00000341697 SRPK2P78362 688 aaKnown RBP25.83■■□□□ 1.72
SEMA6C-201ENST00000341697 CC2D1BQ5T0F9 858 aaKnown RBP25.82■■□□□ 1.72
SEMA6C-201ENST00000341697 MYH16Q9H6N6 1097 aa25.82■■□□□ 1.72
SEMA6C-201ENST00000341697 MAPK8IP3Q9UPT6 1336 aa25.81■■□□□ 1.72
SEMA6C-201ENST00000341697 TNNT2P45379 298 aaPredicted RBP25.8■■□□□ 1.72
SEMA6C-201ENST00000341697 HMGXB3Q12766 1538 aa25.8■■□□□ 1.72
SEMA6C-201ENST00000341697 SAFB2Q14151 953 aaKnown RBP eCLIP25.79■■□□□ 1.72
SEMA6C-201ENST00000341697 HSPA5P11021 654 aaKnown RBP25.78■■□□□ 1.72
SEMA6C-201ENST00000341697 WASHC2CQ9Y4E1 1318 aa25.77■■□□□ 1.72
SEMA6C-201ENST00000341697 STK26Q9P289 416 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms