RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 NACADO15069 1562 aa20■□□□□ 0.79
RRP1B-201ENST00000340648 SENP3-EIF4A1A0A087X0R7 540 aa19.99■□□□□ 0.79
RRP1B-201ENST00000340648 TSHZ2Q9NRE2 1034 aa19.98■□□□□ 0.79
RRP1B-201ENST00000340648 VPS8Q8N3P4 1428 aa19.98■□□□□ 0.79
RRP1B-201ENST00000340648 CCNB3Q8WWL7 1395 aa19.97■□□□□ 0.79
RRP1B-201ENST00000340648 RBM19Q9Y4C8 960 aaKnown RBP19.96■□□□□ 0.79
RRP1B-201ENST00000340648 BCL11AQ9H165 835 aa19.95■□□□□ 0.78
RRP1B-201ENST00000340648 KANK4Q5T7N3 995 aaPredicted RBP19.92■□□□□ 0.78
RRP1B-201ENST00000340648 KIF27Q86VH2 1401 aa19.9■□□□□ 0.78
RRP1B-201ENST00000340648 PPP4R2Q9NY27 417 aa19.9■□□□□ 0.78
RRP1B-201ENST00000340648 KDM2AQ9Y2K7 1162 aa19.89■□□□□ 0.77
RRP1B-201ENST00000340648 B4GALNT3Q6L9W6 998 aa19.86■□□□□ 0.77
RRP1B-201ENST00000340648 BAZ1BQ9UIG0 1483 aaKnown RBP19.86■□□□□ 0.77
RRP1B-201ENST00000340648 CCER2I3L3R5 266 aa19.83■□□□□ 0.77
RRP1B-201ENST00000340648 WIZO95785 1651 aa19.81■□□□□ 0.76
RRP1B-201ENST00000340648 NOP58Q9Y2X3 529 aaKnown RBP19.8■□□□□ 0.76
RRP1B-201ENST00000340648 KCNH8Q96L42 1107 aa19.77■□□□□ 0.76
RRP1B-201ENST00000340648 ARXQ96QS3 562 aa19.77■□□□□ 0.76
RRP1B-201ENST00000340648 SETD5Q9C0A6 1442 aa19.77■□□□□ 0.76
RRP1B-201ENST00000340648 UPF2Q9HAU5 1272 aaKnown RBP19.76■□□□□ 0.75
RRP1B-201ENST00000340648 RAB3GAP2Q9H2M9 1393 aa19.76■□□□□ 0.75
RRP1B-201ENST00000340648 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.74■□□□□ 0.75
RRP1B-201ENST00000340648 TIMELESSQ9UNS1 1208 aa19.74■□□□□ 0.75
RRP1B-201ENST00000340648 WDR43Q15061 677 aaKnown RBP eCLIP19.74■□□□□ 0.75
RRP1B-201ENST00000340648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.73■□□□□ 0.752e-8■■■■□ 20.5
RRP1B-201ENST00000340648 LAS1LQ9Y4W2 734 aaKnown RBP19.72■□□□□ 0.75
RRP1B-201ENST00000340648 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
RRP1B-201ENST00000340648 DHX57Q6P158 1386 aaKnown RBP19.7■□□□□ 0.74
RRP1B-201ENST00000340648 DEKP35659 375 aaKnown RBP19.69■□□□□ 0.74
RRP1B-201ENST00000340648 RTN4Q9NQC3 1192 aaKnown RBP19.69■□□□□ 0.74
RRP1B-201ENST00000340648 DDRGK1Q96HY6 314 aa19.68■□□□□ 0.74
RRP1B-201ENST00000340648 TSPY4P0CV99 314 aa19.67■□□□□ 0.74
RRP1B-201ENST00000340648 TSPY10P0CW01 314 aa19.67■□□□□ 0.74
RRP1B-201ENST00000340648 HSP90AA1P07900 732 aaKnown RBP19.66■□□□□ 0.74
RRP1B-201ENST00000340648 HSPA5P11021 654 aaKnown RBP19.65■□□□□ 0.74
RRP1B-201ENST00000340648 NEFMP07197 916 aa19.64■□□□□ 0.74
RRP1B-201ENST00000340648 FHAD1B1AJZ9 1412 aa19.64■□□□□ 0.73
RRP1B-201ENST00000340648 TOP2AP11388 1531 aaKnown RBP19.63■□□□□ 0.73
RRP1B-201ENST00000340648 RAPGEF2Q9Y4G8 1499 aa19.61■□□□□ 0.73
RRP1B-201ENST00000340648 PPP1R15AO75807 674 aaPredicted RBP19.61■□□□□ 0.73
RRP1B-201ENST00000340648 CARD11Q9BXL7 1154 aa19.61■□□□□ 0.73
RRP1B-201ENST00000340648 CARMIL1Q5VZK9 1371 aa19.6■□□□□ 0.73
RRP1B-201ENST00000340648 PPM1GO15355 546 aaPredicted RBP19.6■□□□□ 0.73
RRP1B-201ENST00000340648 CUX2O14529 1486 aa19.58■□□□□ 0.73
RRP1B-201ENST00000340648 CHGAP10645 457 aaKnown RBP19.58■□□□□ 0.73
RRP1B-201ENST00000340648 ANP32BQ92688 251 aaKnown RBP19.58■□□□□ 0.73
RRP1B-201ENST00000340648 RGL3Q3MIN7 710 aa19.58■□□□□ 0.72
RRP1B-201ENST00000340648 ARHGAP35Q9NRY4 1499 aa19.55■□□□□ 0.72
RRP1B-201ENST00000340648 ERICH6BQ5W0A0 696 aa19.52■□□□□ 0.72
RRP1B-201ENST00000340648 GLIPR1L2Q4G1C9 344 aa19.52■□□□□ 0.72
RRP1B-201ENST00000340648 FOXD1Q16676 465 aa19.51■□□□□ 0.71
RRP1B-201ENST00000340648 CFDP1Q9UEE9 299 aaPredicted RBP19.51■□□□□ 0.71
RRP1B-201ENST00000340648 BECN1Q14457 450 aa19.49■□□□□ 0.71
RRP1B-201ENST00000340648 SLC24A1O60721 1099 aa19.49■□□□□ 0.71
RRP1B-201ENST00000340648 RGS3P49796 1198 aa19.49■□□□□ 0.71
RRP1B-201ENST00000340648 CC2D1BQ5T0F9 858 aaKnown RBP19.44■□□□□ 0.7
RRP1B-201ENST00000340648 KNSTRNQ9Y448 316 aa19.42■□□□□ 0.7
RRP1B-201ENST00000340648 CHMP7Q8WUX9 453 aaPredicted RBP19.41■□□□□ 0.7
RRP1B-201ENST00000340648 PLEKHD1A6NEE1 506 aa19.39■□□□□ 0.69
RRP1B-201ENST00000340648 MPHOSPH9Q99550 1183 aa19.37■□□□□ 0.69
RRP1B-201ENST00000340648 DCAF11Q8TEB1 546 aa19.36■□□□□ 0.69
RRP1B-201ENST00000340648 L3MBTL2Q969R5 705 aa19.35■□□□□ 0.69
RRP1B-201ENST00000340648 IPO9Q96P70 1041 aaKnown RBP19.35■□□□□ 0.69
RRP1B-201ENST00000340648 NUDCQ9Y266 331 aa19.34■□□□□ 0.69
RRP1B-201ENST00000340648 NEUROD2Q15784 382 aa19.33■□□□□ 0.69
RRP1B-201ENST00000340648 SMARCA4P51532 1647 aa19.32■□□□□ 0.68
RRP1B-201ENST00000340648 RCAN3Q9UKA8 241 aa19.32■□□□□ 0.68
RRP1B-201ENST00000340648 FMN1Q68DA7 1419 aa19.31■□□□□ 0.68
RRP1B-201ENST00000340648 TRIM44Q96DX7 344 aaPredicted RBP19.31■□□□□ 0.68
RRP1B-201ENST00000340648 FHOD3Q2V2M9 1422 aa19.31■□□□□ 0.68
RRP1B-201ENST00000340648 EIF4G1Q04637 1599 aaKnown RBP19.3■□□□□ 0.68
RRP1B-201ENST00000340648 FRAT1Q92837 279 aaPredicted RBP19.3■□□□□ 0.68
RRP1B-201ENST00000340648 FANCIQ9NVI1 1328 aa19.29■□□□□ 0.68
RRP1B-201ENST00000340648 SMARCA2P51531 1590 aa19.29■□□□□ 0.68
RRP1B-201ENST00000340648 TCERG1O14776 1098 aaKnown RBP19.28■□□□□ 0.68
RRP1B-201ENST00000340648 PKD2Q13563 968 aa19.28■□□□□ 0.68
RRP1B-201ENST00000340648 CDCA8Q53HL2 280 aa19.27■□□□□ 0.68
RRP1B-201ENST00000340648 KIF21BO75037 1637 aa19.26■□□□□ 0.67
RRP1B-201ENST00000340648 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
RRP1B-201ENST00000340648 PRKRIP1Q9H875 184 aaPredicted RBP19.24■□□□□ 0.67
RRP1B-201ENST00000340648 NAP1L5Q96NT1 182 aaPredicted RBP19.23■□□□□ 0.67
RRP1B-201ENST00000340648 FTSJ3Q8IY81 847 aaKnown RBP19.23■□□□□ 0.67
RRP1B-201ENST00000340648 KTN1Q86UP2 1357 aaKnown RBP19.22■□□□□ 0.67
RRP1B-201ENST00000340648 MYH16Q9H6N6 1097 aa19.22■□□□□ 0.67
RRP1B-201ENST00000340648 STAG3Q9UJ98 1225 aa19.22■□□□□ 0.67
RRP1B-201ENST00000340648 TMF1P82094 1093 aa19.21■□□□□ 0.67
RRP1B-201ENST00000340648 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.2■□□□□ 0.66
RRP1B-201ENST00000340648 TNNT2P45379 298 aaPredicted RBP19.2■□□□□ 0.66
RRP1B-201ENST00000340648 CFAP53Q96M91 514 aa19.19■□□□□ 0.66
RRP1B-201ENST00000340648 ZBED9Q6R2W3 1325 aa19.19■□□□□ 0.66
RRP1B-201ENST00000340648 RALBP1Q15311 655 aa19.18■□□□□ 0.66
RRP1B-201ENST00000340648 GOLGA6L22H0YM25 854 aa19.18■□□□□ 0.66
RRP1B-201ENST00000340648 NCLP19338 710 aaKnown RBP19.17■□□□□ 0.66
RRP1B-201ENST00000340648 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
RRP1B-201ENST00000340648 CCDC18Q5T9S5 1454 aa19.16■□□□□ 0.66
RRP1B-201ENST00000340648 SPRYD3Q8NCJ5 442 aa19.15■□□□□ 0.66
RRP1B-201ENST00000340648 TDRD9Q8NDG6 1382 aaKnown RBP19.12■□□□□ 0.65
RRP1B-201ENST00000340648 ROCK2O75116 1388 aaKnown RBP19.12■□□□□ 0.65
RRP1B-201ENST00000340648 PHLDB1Q86UU1 1377 aa19.11■□□□□ 0.65
RRP1B-201ENST00000340648 SLKQ9H2G2 1235 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms