RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 CHIC2Q9UKJ5 165 aa16.18■□□□□ 0.18
ZNF648-201ENST00000339948 TONSLQ96HA7 1378 aa16.17■□□□□ 0.18
ZNF648-201ENST00000339948 B4GALNT3Q6L9W6 998 aa16.15■□□□□ 0.18
ZNF648-201ENST00000339948 ARAP1Q96P48 1450 aa16.14■□□□□ 0.17
ZNF648-201ENST00000339948 BAZ1BQ9UIG0 1483 aaKnown RBP16.14■□□□□ 0.17
ZNF648-201ENST00000339948 MSH5O43196 834 aa16.12■□□□□ 0.17
ZNF648-201ENST00000339948 ZNF326Q5BKZ1 582 aaKnown RBP16.1■□□□□ 0.17
ZNF648-201ENST00000339948 RRP7BPQ9NSQ0 103 aa16.08■□□□□ 0.17
ZNF648-201ENST00000339948 BICRAQ9NZM4 1560 aa16.08■□□□□ 0.17
ZNF648-201ENST00000339948 PPP1R15AO75807 674 aaPredicted RBP16.08■□□□□ 0.16
ZNF648-201ENST00000339948 SETD5Q9C0A6 1442 aa16.08■□□□□ 0.16
ZNF648-201ENST00000339948 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
ZNF648-201ENST00000339948 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
ZNF648-201ENST00000339948 FOXD1Q16676 465 aa16.03■□□□□ 0.16
ZNF648-201ENST00000339948 NPM2Q86SE8 214 aaKnown RBP16.03■□□□□ 0.16
ZNF648-201ENST00000339948 WDR97A6NE52 1622 aa16.03■□□□□ 0.16
ZNF648-201ENST00000339948 SALL2Q9Y467 1007 aaPredicted RBP16.03■□□□□ 0.16
ZNF648-201ENST00000339948 PHLDB1Q86UU1 1377 aa16.01■□□□□ 0.15
ZNF648-201ENST00000339948 CCDC184Q52MB2 194 aa15.99■□□□□ 0.15
ZNF648-201ENST00000339948 CCER2I3L3R5 266 aa15.99■□□□□ 0.15
ZNF648-201ENST00000339948 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
ZNF648-201ENST00000339948 RRBP1Q9P2E9 1410 aaKnown RBP15.97■□□□□ 0.15
ZNF648-201ENST00000339948 HSPA5P11021 654 aaKnown RBP15.95■□□□□ 0.14
ZNF648-201ENST00000339948 DEKP35659 375 aaKnown RBP15.95■□□□□ 0.14
ZNF648-201ENST00000339948 CUX2O14529 1486 aa15.94■□□□□ 0.14
ZNF648-201ENST00000339948 ARHGAP35Q9NRY4 1499 aa15.93■□□□□ 0.14
ZNF648-201ENST00000339948 RTN4Q9NQC3 1192 aaKnown RBP15.93■□□□□ 0.14
ZNF648-201ENST00000339948 RTL5Q5HYW3 569 aaPredicted RBP15.91■□□□□ 0.14
ZNF648-201ENST00000339948 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
ZNF648-201ENST00000339948 CARMIL1Q5VZK9 1371 aa15.9■□□□□ 0.14
ZNF648-201ENST00000339948 PPP4R2Q9NY27 417 aa15.89■□□□□ 0.13
ZNF648-201ENST00000339948 PRXQ9BXM0 1461 aa15.89■□□□□ 0.13
ZNF648-201ENST00000339948 EIF4G2P78344 907 aaKnown RBP eCLIP15.89■□□□□ 0.13
ZNF648-201ENST00000339948 CCDC136Q96JN2 1154 aa15.89■□□□□ 0.13
ZNF648-201ENST00000339948 FHOD3Q2V2M9 1422 aa15.89■□□□□ 0.13
ZNF648-201ENST00000339948 MAPKBP1O60336 1514 aa15.88■□□□□ 0.13
ZNF648-201ENST00000339948 PRKCSHP14314 528 aaPredicted RBP15.86■□□□□ 0.13
ZNF648-201ENST00000339948 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
ZNF648-201ENST00000339948 PEG3Q9GZU2 1588 aa15.83■□□□□ 0.13
ZNF648-201ENST00000339948 ANP32AP39687 249 aaKnown RBP15.83■□□□□ 0.12
ZNF648-201ENST00000339948 NOP58Q9Y2X3 529 aaKnown RBP15.82■□□□□ 0.12
ZNF648-201ENST00000339948 WASHC2AQ641Q2 1341 aa15.82■□□□□ 0.12
ZNF648-201ENST00000339948 LAS1LQ9Y4W2 734 aaKnown RBP15.81■□□□□ 0.12
ZNF648-201ENST00000339948 IGF1RP08069 1367 aa15.8■□□□□ 0.12
ZNF648-201ENST00000339948 L3MBTL2Q969R5 705 aa15.79■□□□□ 0.12
ZNF648-201ENST00000339948 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
ZNF648-201ENST00000339948 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
ZNF648-201ENST00000339948 FANCIQ9NVI1 1328 aa15.78■□□□□ 0.12
ZNF648-201ENST00000339948 TIMELESSQ9UNS1 1208 aa15.77■□□□□ 0.12
ZNF648-201ENST00000339948 C11orf95C9JLR9 678 aaPredicted RBP15.76■□□□□ 0.11
ZNF648-201ENST00000339948 ZNF777Q9ULD5 760 aaPredicted RBP15.76■□□□□ 0.11
ZNF648-201ENST00000339948 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
ZNF648-201ENST00000339948 CUX1P39880 1505 aa15.76■□□□□ 0.11
ZNF648-201ENST00000339948 PRKRIP1Q9H875 184 aaPredicted RBP15.74■□□□□ 0.11
ZNF648-201ENST00000339948 KDM2AQ9Y2K7 1162 aa15.73■□□□□ 0.11
ZNF648-201ENST00000339948 TMC1Q8TDI8 760 aa15.73■□□□□ 0.11
ZNF648-201ENST00000339948 ERICH3Q5RHP9 1530 aa15.72■□□□□ 0.11
ZNF648-201ENST00000339948 SLC4A1APQ9BWU0 796 aaKnown RBP15.72■□□□□ 0.11
ZNF648-201ENST00000339948 FHAD1B1AJZ9 1412 aa15.71■□□□□ 0.11
ZNF648-201ENST00000339948 CCDC18Q5T9S5 1454 aa15.71■□□□□ 0.11
ZNF648-201ENST00000339948 MPHOSPH9Q99550 1183 aa15.68■□□□□ 0.1
ZNF648-201ENST00000339948 TIAM1Q13009 1591 aa15.67■□□□□ 0.1
ZNF648-201ENST00000339948 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.67■□□□□ 0.1
ZNF648-201ENST00000339948 AKNAQ7Z591 1439 aa15.66■□□□□ 0.1
ZNF648-201ENST00000339948 ANO8Q9HCE9 1232 aaPredicted RBP15.64■□□□□ 0.1
ZNF648-201ENST00000339948 SKAP1Q86WV1 359 aa15.63■□□□□ 0.09
ZNF648-201ENST00000339948 NBPF8Q3BBV2 869 aa15.63■□□□□ 0.09
ZNF648-201ENST00000339948 NEFMP07197 916 aa15.62■□□□□ 0.09
ZNF648-201ENST00000339948 FGD6Q6ZV73 1430 aa15.62■□□□□ 0.09
ZNF648-201ENST00000339948 IL27Q8NEV9 243 aa15.61■□□□□ 0.09
ZNF648-201ENST00000339948 TDRD9Q8NDG6 1382 aaKnown RBP15.61■□□□□ 0.09
ZNF648-201ENST00000339948 PTPRKQ15262 1439 aa15.61■□□□□ 0.09
ZNF648-201ENST00000339948 DAXXQ9UER7 740 aaPredicted RBP15.61■□□□□ 0.09
ZNF648-201ENST00000339948 AQRO60306 1485 aaKnown RBP eCLIP15.61■□□□□ 0.09
ZNF648-201ENST00000339948 RAD54L2Q9Y4B4 1467 aa15.61■□□□□ 0.09
ZNF648-201ENST00000339948 EIF5BO60841 1220 aaKnown RBP15.59■□□□□ 0.09
ZNF648-201ENST00000339948 KIF7Q2M1P5 1343 aa15.59■□□□□ 0.09
ZNF648-201ENST00000339948 ZBED9Q6R2W3 1325 aa15.59■□□□□ 0.09
ZNF648-201ENST00000339948 IPO9Q96P70 1041 aaKnown RBP15.58■□□□□ 0.09
ZNF648-201ENST00000339948 FGD5Q6ZNL6 1462 aa15.58■□□□□ 0.09
ZNF648-201ENST00000339948 SLC4A3P48751 1232 aa15.57■□□□□ 0.08
ZNF648-201ENST00000339948 FMN1Q68DA7 1419 aa15.57■□□□□ 0.08
ZNF648-201ENST00000339948 UACAQ9BZF9 1416 aa15.57■□□□□ 0.08
ZNF648-201ENST00000339948 PLIN1O60240 522 aa15.56■□□□□ 0.08
ZNF648-201ENST00000339948 EXOC6Q8TAG9 804 aa15.56■□□□□ 0.08
ZNF648-201ENST00000339948 CCDC7Q96M83 1385 aa15.56■□□□□ 0.08
ZNF648-201ENST00000339948 ZNF644Q9H582 1327 aaPredicted RBP15.56■□□□□ 0.08
ZNF648-201ENST00000339948 NUDCQ9Y266 331 aa15.56■□□□□ 0.08
ZNF648-201ENST00000339948 PCF11O94913 1555 aaKnown RBP15.55■□□□□ 0.08
ZNF648-201ENST00000339948 MYT1LQ9UL68 1186 aa15.55■□□□□ 0.08
ZNF648-201ENST00000339948 ARXQ96QS3 562 aa15.54■□□□□ 0.08
ZNF648-201ENST00000339948 CNTLNQ9NXG0 1405 aa15.53■□□□□ 0.08
ZNF648-201ENST00000339948 RGL3Q3MIN7 710 aa15.53■□□□□ 0.08
ZNF648-201ENST00000339948 FBLN2P98095 1184 aa15.52■□□□□ 0.07
ZNF648-201ENST00000339948 ERICH6BQ5W0A0 696 aa15.52■□□□□ 0.07
ZNF648-201ENST00000339948 CARD11Q9BXL7 1154 aa15.51■□□□□ 0.07
ZNF648-201ENST00000339948 NAIPQ13075 1403 aa15.51■□□□□ 0.07
ZNF648-201ENST00000339948 NCAPD3P42695 1498 aa15.51■□□□□ 0.07
ZNF648-201ENST00000339948 CFTRP13569 1480 aa15.51■□□□□ 0.07
ZNF648-201ENST00000339948 CC2D1BQ5T0F9 858 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms