RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 TRIM52Q96A61 297 aa16.8■□□□□ 0.28
BRPF3-201ENST00000339717 BECN1Q14457 450 aa16.78■□□□□ 0.28
BRPF3-201ENST00000339717 AMER1Q5JTC6 1135 aaPredicted RBP16.75■□□□□ 0.27
BRPF3-201ENST00000339717 IPO9Q96P70 1041 aaKnown RBP16.73■□□□□ 0.27
BRPF3-201ENST00000339717 CANXP27824 592 aaKnown RBP16.72■□□□□ 0.27
BRPF3-201ENST00000339717 IRX6P78412 446 aaPredicted RBP16.71■□□□□ 0.27
BRPF3-201ENST00000339717 TNNT3P45378 269 aaPredicted RBP16.67■□□□□ 0.26
BRPF3-201ENST00000339717 RRP9O43818 475 aaKnown RBP16.66■□□□□ 0.26
BRPF3-201ENST00000339717 GSE1Q14687 1217 aa16.65■□□□□ 0.26
BRPF3-201ENST00000339717 MSNP26038 577 aaKnown RBP16.65■□□□□ 0.26
BRPF3-201ENST00000339717 PDIA4P13667 645 aaKnown RBP16.64■□□□□ 0.25
BRPF3-201ENST00000339717 DDX10Q13206 875 aaKnown RBP16.63■□□□□ 0.25
BRPF3-201ENST00000339717 ARID4BQ4LE39 1312 aaPredicted RBP16.62■□□□□ 0.25
BRPF3-201ENST00000339717 DNTTIP2Q5QJE6 756 aaKnown RBP16.62■□□□□ 0.25
BRPF3-201ENST00000339717 ZMYND15Q9H091 742 aa16.62■□□□□ 0.25
BRPF3-201ENST00000339717 ABCC9O60706 1549 aa16.62■□□□□ 0.25
BRPF3-201ENST00000339717 PLEKHG5O94827 1062 aa16.62■□□□□ 0.25
BRPF3-201ENST00000339717 IL27Q8NEV9 243 aa16.6■□□□□ 0.25
BRPF3-201ENST00000339717 MAP7D2Q96T17 732 aa16.6■□□□□ 0.25
BRPF3-201ENST00000339717 APPP05067 770 aa16.59■□□□□ 0.25
BRPF3-201ENST00000339717 GOLGA6L22H0YM25 854 aa16.58■□□□□ 0.24
BRPF3-201ENST00000339717 FAM43AQ8N2R8 423 aa16.57■□□□□ 0.24
BRPF3-201ENST00000339717 TAF7LQ5H9L4 462 aa16.53■□□□□ 0.24
BRPF3-201ENST00000339717 PTMAP06454 111 aaKnown RBP16.53■□□□□ 0.24
BRPF3-201ENST00000339717 MTERF4Q7Z6M4 381 aaKnown RBP16.52■□□□□ 0.23
BRPF3-201ENST00000339717 MYO15BQ96JP2 1530 aa16.51■□□□□ 0.23
BRPF3-201ENST00000339717 GOLGA6L3A6NEY3 463 aa16.48■□□□□ 0.23
BRPF3-201ENST00000339717 CHAF1AQ13111 956 aaPredicted RBP16.48■□□□□ 0.23
BRPF3-201ENST00000339717 TPM2P07951 284 aa16.47■□□□□ 0.23
BRPF3-201ENST00000339717 B4GALNT3Q6L9W6 998 aa16.46■□□□□ 0.23
BRPF3-201ENST00000339717 FAM9BQ8IZU0 186 aa16.46■□□□□ 0.23
BRPF3-201ENST00000339717 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.42■□□□□ 0.22
BRPF3-201ENST00000339717 CCER2I3L3R5 266 aa16.41■□□□□ 0.22
BRPF3-201ENST00000339717 TCERG1O14776 1098 aaKnown RBP16.39■□□□□ 0.21
BRPF3-201ENST00000339717 MYH16Q9H6N6 1097 aa16.39■□□□□ 0.21
BRPF3-201ENST00000339717 ARID3AQ99856 593 aa16.37■□□□□ 0.21
BRPF3-201ENST00000339717 TAF3Q5VWG9 929 aa16.36■□□□□ 0.21
BRPF3-201ENST00000339717 CALRP27797 417 aaKnown RBP16.36■□□□□ 0.21
BRPF3-201ENST00000339717 RBM10P98175 930 aaKnown RBP16.35■□□□□ 0.21
BRPF3-201ENST00000339717 MRS2Q9HD23 443 aa16.35■□□□□ 0.21
BRPF3-201ENST00000339717 BRPF3Q9ULD4 1205 aa16.34■□□□□ 0.21
BRPF3-201ENST00000339717 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.31■□□□□ 0.2
BRPF3-201ENST00000339717 PABPN1Q86U42 306 aaKnown RBP eCLIP16.31■□□□□ 0.2
BRPF3-201ENST00000339717 ZNF771Q7L3S4 317 aaPredicted RBP16.31■□□□□ 0.2
BRPF3-201ENST00000339717 BBXQ8WY36 941 aaPredicted RBP16.3■□□□□ 0.2
BRPF3-201ENST00000339717 FAM13BQ9NYF5 915 aa16.29■□□□□ 0.2
BRPF3-201ENST00000339717 KIAA2012Q0VF49 1180 aa16.25■□□□□ 0.19
BRPF3-201ENST00000339717 CCDC66A2RUB6 948 aa16.25■□□□□ 0.19
BRPF3-201ENST00000339717 PDCL3Q9H2J4 239 aa16.24■□□□□ 0.19
BRPF3-201ENST00000339717 HOMEZQ8IX15 550 aa16.22■□□□□ 0.19
BRPF3-201ENST00000339717 GOLGA6L6A8MZA4 724 aa16.22■□□□□ 0.19
BRPF3-201ENST00000339717 CSPP1Q1MSJ5 1256 aa16.22■□□□□ 0.19
BRPF3-201ENST00000339717 GOLGA6L1Q8N7Z2 621 aa16.21■□□□□ 0.19
BRPF3-201ENST00000339717 TONSLQ96HA7 1378 aa16.21■□□□□ 0.19
BRPF3-201ENST00000339717 HAP1P54257 671 aaPredicted RBP16.2■□□□□ 0.18
BRPF3-201ENST00000339717 MSH5O43196 834 aa16.19■□□□□ 0.18
BRPF3-201ENST00000339717 TMC1Q8TDI8 760 aa16.17■□□□□ 0.18
BRPF3-201ENST00000339717 EEA1Q15075 1411 aa16.17■□□□□ 0.18
BRPF3-201ENST00000339717 FRAT1Q92837 279 aaPredicted RBP16.17■□□□□ 0.18
BRPF3-201ENST00000339717 GBP4Q96PP9 640 aa16.17■□□□□ 0.18
BRPF3-201ENST00000339717 BCL11BQ9C0K0 894 aaPredicted RBP16.16■□□□□ 0.18
BRPF3-201ENST00000339717 FGD1P98174 961 aa16.16■□□□□ 0.18
BRPF3-201ENST00000339717 FAM50AQ14320 339 aaKnown RBP16.15■□□□□ 0.18
BRPF3-201ENST00000339717 GZF1Q9H116 711 aaPredicted RBP16.14■□□□□ 0.17
BRPF3-201ENST00000339717 NFKBIBQ15653 356 aa16.12■□□□□ 0.17
BRPF3-201ENST00000339717 ZCCHC6Q5VYS8 1495 aaKnown RBP16.12■□□□□ 0.17
BRPF3-201ENST00000339717 NAP1L2Q9ULW6 460 aaPredicted RBP16.12■□□□□ 0.17
BRPF3-201ENST00000339717 PATL2C9JE40 543 aaKnown RBP16.12■□□□□ 0.17
BRPF3-201ENST00000339717 TSPYL1Q9H0U9 437 aa16.11■□□□□ 0.17
BRPF3-201ENST00000339717 SETQ01105 290 aaPredicted RBP16.1■□□□□ 0.17
BRPF3-201ENST00000339717 BRD2P25440 801 aaKnown RBP16.09■□□□□ 0.17
BRPF3-201ENST00000339717 HSCBQ8IWL3 235 aa16.09■□□□□ 0.17
BRPF3-201ENST00000339717 C11orf95C9JLR9 678 aaPredicted RBP16.09■□□□□ 0.17
BRPF3-201ENST00000339717 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
BRPF3-201ENST00000339717 DDX11L8A8MPP1 907 aa16.08■□□□□ 0.17
BRPF3-201ENST00000339717 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
BRPF3-201ENST00000339717 CALD1Q05682 793 aaKnown RBP16.07■□□□□ 0.16
BRPF3-201ENST00000339717 MS4A1P11836 297 aa16.07■□□□□ 0.16
BRPF3-201ENST00000339717 IRX3P78415 501 aaPredicted RBP16.07■□□□□ 0.16
BRPF3-201ENST00000339717 MRE11P49959 708 aa16.07■□□□□ 0.16
BRPF3-201ENST00000339717 C14orf37Q86TY3 774 aa16.06■□□□□ 0.16
BRPF3-201ENST00000339717 NOM1Q5C9Z4 860 aaKnown RBP16.06■□□□□ 0.16
BRPF3-201ENST00000339717 PDE4AP27815 886 aa16.05■□□□□ 0.16
BRPF3-201ENST00000339717 PAK3O75914 559 aaPredicted RBP16.05■□□□□ 0.16
BRPF3-201ENST00000339717 HSP90AB1P08238 724 aaKnown RBP16.04■□□□□ 0.16
BRPF3-201ENST00000339717 NRDCO43847 1150 aa16.04■□□□□ 0.16
BRPF3-201ENST00000339717 SKOR2Q2VWA4 1001 aaPredicted RBP16.03■□□□□ 0.16
BRPF3-201ENST00000339717 SLKQ9H2G2 1235 aaPredicted RBP16.02■□□□□ 0.16
BRPF3-201ENST00000339717 RGS3P49796 1198 aa16.01■□□□□ 0.15
BRPF3-201ENST00000339717 TEX35Q5T0J7 233 aa15.99■□□□□ 0.15
BRPF3-201ENST00000339717 R3HCC1Q9Y3T6 440 aaKnown RBP15.99■□□□□ 0.15
BRPF3-201ENST00000339717 HMGB1P09429 215 aaKnown RBP15.99■□□□□ 0.15
BRPF3-201ENST00000339717 ISY1Q9ULR0 285 aaKnown RBP15.99■□□□□ 0.15
BRPF3-201ENST00000339717 HSP90B1P14625 803 aaKnown RBP15.97■□□□□ 0.15
BRPF3-201ENST00000339717 AAMPQ13685 434 aa15.97■□□□□ 0.15
BRPF3-201ENST00000339717 HTATSF1O43719 755 aaKnown RBP15.97■□□□□ 0.15
BRPF3-201ENST00000339717 PLCB2Q00722 1185 aa15.97■□□□□ 0.15
BRPF3-201ENST00000339717 CC2D1BQ5T0F9 858 aaKnown RBP15.97■□□□□ 0.15
BRPF3-201ENST00000339717 GPS2Q13227 327 aa15.96■□□□□ 0.15
BRPF3-201ENST00000339717 KIAA1211Q6ZU35 1233 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms