RNA–Protein interactions for RNA: ENST00000339600.5

NDUFA4-201, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA4, Length 2,130 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-201ENST00000339600 PAK3O75914 559 aaPredicted RBP9.96□□□□□ -0.82
NDUFA4-201ENST00000339600 BCL11BQ9C0K0 894 aaPredicted RBP9.95□□□□□ -0.82
NDUFA4-201ENST00000339600 THOC2Q8NI27 1593 aaKnown RBP9.94□□□□□ -0.82
NDUFA4-201ENST00000339600 KLHL34Q8N239 644 aa9.93□□□□□ -0.82
NDUFA4-201ENST00000339600 RANGAP1P46060 587 aaPredicted RBP9.91□□□□□ -0.82
NDUFA4-201ENST00000339600 TAF7LQ5H9L4 462 aa9.91□□□□□ -0.82
NDUFA4-201ENST00000339600 ARXQ96QS3 562 aa9.9□□□□□ -0.82
NDUFA4-201ENST00000339600 USP35Q9P2H5 1018 aa9.89□□□□□ -0.83
NDUFA4-201ENST00000339600 BRPF3Q9ULD4 1205 aa9.88□□□□□ -0.83
NDUFA4-201ENST00000339600 HMGXB3Q12766 1538 aa9.88□□□□□ -0.83
NDUFA4-201ENST00000339600 FAM43AQ8N2R8 423 aa9.88□□□□□ -0.83
NDUFA4-201ENST00000339600 NESP48681 1621 aa9.86□□□□□ -0.83
NDUFA4-201ENST00000339600 RRP9O43818 475 aaKnown RBP9.86□□□□□ -0.83
NDUFA4-201ENST00000339600 ATAD2BQ9ULI0 1458 aa9.85□□□□□ -0.83
NDUFA4-201ENST00000339600 PHF23Q9BUL5 403 aaPredicted RBP9.85□□□□□ -0.83
NDUFA4-201ENST00000339600 IPO9Q96P70 1041 aaKnown RBP9.84□□□□□ -0.83
NDUFA4-201ENST00000339600 WRNQ14191 1432 aaPredicted RBP eCLIP9.83□□□□□ -0.84
NDUFA4-201ENST00000339600 KCNH8Q96L42 1107 aa9.83□□□□□ -0.84
NDUFA4-201ENST00000339600 LAMC3Q9Y6N6 1575 aa9.83□□□□□ -0.84
NDUFA4-201ENST00000339600 SMARCA2P51531 1590 aa9.82□□□□□ -0.84
NDUFA4-201ENST00000339600 HSP90AA2PQ14568 343 aaPredicted RBP9.81□□□□□ -0.84
NDUFA4-201ENST00000339600 NEFMP07197 916 aa9.79□□□□□ -0.84
NDUFA4-201ENST00000339600 ZBTB47Q9UFB7 747 aaPredicted RBP9.79□□□□□ -0.84
NDUFA4-201ENST00000339600 PRDM4Q9UKN5 801 aa9.77□□□□□ -0.84
NDUFA4-201ENST00000339600 PDS5BQ9NTI5 1447 aa9.76□□□□□ -0.85
NDUFA4-201ENST00000339600 ANP32AP39687 249 aaKnown RBP9.76□□□□□ -0.85
NDUFA4-201ENST00000339600 RSPH4AQ5TD94 716 aa9.76□□□□□ -0.85
NDUFA4-201ENST00000339600 PPP4R2Q9NY27 417 aa9.76□□□□□ -0.85
NDUFA4-201ENST00000339600 GSE1Q14687 1217 aa9.75□□□□□ -0.85
NDUFA4-201ENST00000339600 BAZ1AQ9NRL2 1556 aaPredicted RBP9.75□□□□□ -0.85
NDUFA4-201ENST00000339600 CALD1Q05682 793 aaKnown RBP9.74□□□□□ -0.85
NDUFA4-201ENST00000339600 KIF21AQ7Z4S6 1674 aa9.74□□□□□ -0.85
NDUFA4-201ENST00000339600 CENPJQ9HC77 1338 aaPredicted RBP9.73□□□□□ -0.85
NDUFA4-201ENST00000339600 WDR62O43379 1518 aa9.72□□□□□ -0.85
NDUFA4-201ENST00000339600 OSCARQ8IYS5 282 aa9.71□□□□□ -0.85
NDUFA4-201ENST00000339600 SMARCA4P51532 1647 aa9.71□□□□□ -0.85
NDUFA4-201ENST00000339600 PPM1GO15355 546 aaPredicted RBP9.71□□□□□ -0.86
NDUFA4-201ENST00000339600 HSP90AA1P07900 732 aaKnown RBP9.71□□□□□ -0.86
NDUFA4-201ENST00000339600 MRC2Q9UBG0 1479 aa9.7□□□□□ -0.86
NDUFA4-201ENST00000339600 NAP1L2Q9ULW6 460 aaPredicted RBP9.7□□□□□ -0.86
NDUFA4-201ENST00000339600 PEG3Q9GZU2 1588 aa9.7□□□□□ -0.86
NDUFA4-201ENST00000339600 BAZ1BQ9UIG0 1483 aaKnown RBP9.7□□□□□ -0.86
NDUFA4-201ENST00000339600 ZNF326Q5BKZ1 582 aaKnown RBP9.7□□□□□ -0.86
NDUFA4-201ENST00000339600 CCER2I3L3R5 266 aa9.68□□□□□ -0.86
NDUFA4-201ENST00000339600 EEA1Q15075 1411 aa9.66□□□□□ -0.86
NDUFA4-201ENST00000339600 GTF2E1P29083 439 aaPredicted RBP9.66□□□□□ -0.86
NDUFA4-201ENST00000339600 PAXIP1Q6ZW49 1069 aaPredicted RBP9.66□□□□□ -0.86
NDUFA4-201ENST00000339600 IPO4Q8TEX9 1081 aaKnown RBP9.65□□□□□ -0.86
NDUFA4-201ENST00000339600 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
NDUFA4-201ENST00000339600 FRAT1Q92837 279 aaPredicted RBP9.65□□□□□ -0.86
NDUFA4-201ENST00000339600 RIMBP3CA6NJZ7 1639 aa9.65□□□□□ -0.87
NDUFA4-201ENST00000339600 RIMBP3BA6NNM3 1639 aa9.65□□□□□ -0.87
NDUFA4-201ENST00000339600 RIMBP3Q9UFD9 1639 aa9.65□□□□□ -0.87
NDUFA4-201ENST00000339600 TRIM52Q96A61 297 aa9.64□□□□□ -0.87
NDUFA4-201ENST00000339600 RRAGDQ9NQL2 400 aaPredicted RBP9.64□□□□□ -0.87
NDUFA4-201ENST00000339600 BRD2P25440 801 aaKnown RBP9.62□□□□□ -0.87
NDUFA4-201ENST00000339600 RGS3P49796 1198 aa9.62□□□□□ -0.87
NDUFA4-201ENST00000339600 CADPSQ9ULU8 1353 aa9.62□□□□□ -0.87
NDUFA4-201ENST00000339600 IRX6P78412 446 aaPredicted RBP9.62□□□□□ -0.87
NDUFA4-201ENST00000339600 DCAF11Q8TEB1 546 aa9.62□□□□□ -0.87
NDUFA4-201ENST00000339600 NAP1L5Q96NT1 182 aaPredicted RBP9.62□□□□□ -0.87
NDUFA4-201ENST00000339600 LAS1LQ9Y4W2 734 aaKnown RBP9.62□□□□□ -0.87
NDUFA4-201ENST00000339600 STAC3Q96MF2 364 aa9.61□□□□□ -0.87
NDUFA4-201ENST00000339600 PDCL3Q9H2J4 239 aa9.61□□□□□ -0.87
NDUFA4-201ENST00000339600 CHMP4BQ9H444 224 aaKnown RBP9.6□□□□□ -0.87
NDUFA4-201ENST00000339600 B4GALNT3Q6L9W6 998 aa9.58□□□□□ -0.88
NDUFA4-201ENST00000339600 ARHGEF11O15085 1522 aa9.58□□□□□ -0.88
NDUFA4-201ENST00000339600 CANXP27824 592 aaKnown RBP9.58□□□□□ -0.88
NDUFA4-201ENST00000339600 DHX57Q6P158 1386 aaKnown RBP9.58□□□□□ -0.88
NDUFA4-201ENST00000339600 CLCN1P35523 988 aa9.57□□□□□ -0.88
NDUFA4-201ENST00000339600 EHMT2Q96KQ7 1210 aa9.56□□□□□ -0.88
NDUFA4-201ENST00000339600 PNNQ9H307 717 aaKnown RBP9.56□□□□□ -0.88
NDUFA4-201ENST00000339600 NFKBIBQ15653 356 aa9.55□□□□□ -0.88
NDUFA4-201ENST00000339600 CHMP4AQ9BY43 222 aa9.55□□□□□ -0.88
NDUFA4-201ENST00000339600 CEP164Q9UPV0 1460 aa9.55□□□□□ -0.88
NDUFA4-201ENST00000339600 PPP1R15AO75807 674 aaPredicted RBP9.55□□□□□ -0.88
NDUFA4-201ENST00000339600 HNRNPUL2Q1KMD3 747 aaKnown RBP9.53□□□□□ -0.88
NDUFA4-201ENST00000339600 DHX37Q8IY37 1157 aaKnown RBP9.53□□□□□ -0.88
NDUFA4-201ENST00000339600 CEP162Q5TB80 1403 aa9.52□□□□□ -0.88
NDUFA4-201ENST00000339600 CHRM1P11229 460 aaPredicted RBP9.52□□□□□ -0.89
NDUFA4-201ENST00000339600 CNGB1Q14028 1251 aaPredicted RBP9.52□□□□□ -0.89
NDUFA4-201ENST00000339600 TPM2P07951 284 aa9.51□□□□□ -0.89
NDUFA4-201ENST00000339600 SMAP1Q8IYB5 467 aaPredicted RBP9.51□□□□□ -0.89
NDUFA4-201ENST00000339600 NCLP19338 710 aaKnown RBP9.5□□□□□ -0.89
NDUFA4-201ENST00000339600 TEX2Q8IWB9 1127 aa9.5□□□□□ -0.89
NDUFA4-201ENST00000339600 FTSJ3Q8IY81 847 aaKnown RBP9.5□□□□□ -0.89
NDUFA4-201ENST00000339600 DDX10Q13206 875 aaKnown RBP9.49□□□□□ -0.89
NDUFA4-201ENST00000339600 HOMEZQ8IX15 550 aa9.49□□□□□ -0.89
NDUFA4-201ENST00000339600 ZFP91Q96JP5 570 aaPredicted RBP9.49□□□□□ -0.89
NDUFA4-201ENST00000339600 FANCD2Q9BXW9 1451 aa9.49□□□□□ -0.89
NDUFA4-201ENST00000339600 ANP32CO43423 234 aa9.48□□□□□ -0.89
NDUFA4-201ENST00000339600 FOXD1Q16676 465 aa9.47□□□□□ -0.89
NDUFA4-201ENST00000339600 SAMD1Q6SPF0 538 aaPredicted RBP9.47□□□□□ -0.89
NDUFA4-201ENST00000339600 TRHP20396 242 aaPredicted RBP9.47□□□□□ -0.89
NDUFA4-201ENST00000339600 UTP14CQ5TAP6 766 aaKnown RBP9.46□□□□□ -0.89
NDUFA4-201ENST00000339600 TMEM51Q9NW97 253 aa9.46□□□□□ -0.89
NDUFA4-201ENST00000339600 HNRNPUQ00839 825 aaKnown RBP eCLIP9.46□□□□□ -0.9
NDUFA4-201ENST00000339600 DDRGK1Q96HY6 314 aa9.46□□□□□ -0.9
NDUFA4-201ENST00000339600 ARAP1Q96P48 1450 aa9.45□□□□□ -0.9
NDUFA4-201ENST00000339600 MROH2BQ7Z745 1585 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms