RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 WIZO95785 1651 aa19.5■□□□□ 0.71
PARVB-201ENST00000338758 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
PARVB-201ENST00000338758 ATAD2BQ9ULI0 1458 aa19.49■□□□□ 0.71
PARVB-201ENST00000338758 EIF4G1Q04637 1599 aaKnown RBP19.47■□□□□ 0.71
PARVB-201ENST00000338758 HIRIP3Q9BW71 556 aaPredicted RBP19.47■□□□□ 0.71
PARVB-201ENST00000338758 RGL3Q3MIN7 710 aa19.45■□□□□ 0.7
PARVB-201ENST00000338758 GTF3C3Q9Y5Q9 886 aa19.45■□□□□ 0.7
PARVB-201ENST00000338758 TOP2AP11388 1531 aaKnown RBP19.44■□□□□ 0.7
PARVB-201ENST00000338758 CANXP27824 592 aaKnown RBP19.43■□□□□ 0.7
PARVB-201ENST00000338758 FHAD1B1AJZ9 1412 aa19.41■□□□□ 0.7
PARVB-201ENST00000338758 ARID4BQ4LE39 1312 aaPredicted RBP19.4■□□□□ 0.7
PARVB-201ENST00000338758 BCL11AQ9H165 835 aa19.4■□□□□ 0.7
PARVB-201ENST00000338758 FAM9BQ8IZU0 186 aa19.38■□□□□ 0.69
PARVB-201ENST00000338758 ZBTB47Q9UFB7 747 aaPredicted RBP19.36■□□□□ 0.69
PARVB-201ENST00000338758 CCNB3Q8WWL7 1395 aa19.36■□□□□ 0.69
PARVB-201ENST00000338758 PPP1R15AO75807 674 aaPredicted RBP19.36■□□□□ 0.69
PARVB-201ENST00000338758 EIF4G2P78344 907 aaKnown RBP eCLIP19.34■□□□□ 0.691e-6■■■■■ 32.5
PARVB-201ENST00000338758 SALL2Q9Y467 1007 aaPredicted RBP19.34■□□□□ 0.69
PARVB-201ENST00000338758 HNRNPUQ00839 825 aaKnown RBP eCLIP19.33■□□□□ 0.69
PARVB-201ENST00000338758 SMARCA4P51532 1647 aa19.32■□□□□ 0.68
PARVB-201ENST00000338758 TMC1Q8TDI8 760 aa19.32■□□□□ 0.68
PARVB-201ENST00000338758 TRHP20396 242 aaPredicted RBP19.27■□□□□ 0.68
PARVB-201ENST00000338758 ACIN1Q9UKV3 1341 aaKnown RBP19.27■□□□□ 0.68
PARVB-201ENST00000338758 KANK4Q5T7N3 995 aaPredicted RBP19.27■□□□□ 0.67
PARVB-201ENST00000338758 CARMIL2Q6F5E8 1435 aa19.27■□□□□ 0.67
PARVB-201ENST00000338758 SIN3AQ96ST3 1273 aa19.26■□□□□ 0.67
PARVB-201ENST00000338758 VPS8Q8N3P4 1428 aa19.25■□□□□ 0.67
PARVB-201ENST00000338758 MRS2Q9HD23 443 aa19.24■□□□□ 0.67
PARVB-201ENST00000338758 FANCD2Q9BXW9 1451 aa19.2■□□□□ 0.66
PARVB-201ENST00000338758 PLEKHG5O94827 1062 aa19.19■□□□□ 0.66
PARVB-201ENST00000338758 SCAF1Q9H7N4 1312 aaKnown RBP19.18■□□□□ 0.66
PARVB-201ENST00000338758 C14orf37Q86TY3 774 aa19.18■□□□□ 0.66
PARVB-201ENST00000338758 WDR43Q15061 677 aaKnown RBP eCLIP19.17■□□□□ 0.66
PARVB-201ENST00000338758 JPH4Q96JJ6 628 aa19.17■□□□□ 0.66
PARVB-201ENST00000338758 MLECQ14165 292 aa19.17■□□□□ 0.66
PARVB-201ENST00000338758 CARD11Q9BXL7 1154 aa19.16■□□□□ 0.66
PARVB-201ENST00000338758 MIER1Q8N108 512 aa19.16■□□□□ 0.66
PARVB-201ENST00000338758 FMN1Q68DA7 1419 aa19.14■□□□□ 0.65
PARVB-201ENST00000338758 RAPGEF2Q9Y4G8 1499 aa19.14■□□□□ 0.65
PARVB-201ENST00000338758 GGT6Q6P531 493 aa19.11■□□□□ 0.65
PARVB-201ENST00000338758 FKBP8Q14318 412 aa19.1■□□□□ 0.65
PARVB-201ENST00000338758 FHOD3Q2V2M9 1422 aa19.1■□□□□ 0.65
PARVB-201ENST00000338758 EFCAB2Q5VUJ9 269 aa19.09■□□□□ 0.65
PARVB-201ENST00000338758 ARHGAP35Q9NRY4 1499 aa19.09■□□□□ 0.65
PARVB-201ENST00000338758 RUSC2Q8N2Y8 1516 aa19.09■□□□□ 0.65
PARVB-201ENST00000338758 RTL5Q5HYW3 569 aaPredicted RBP19.07■□□□□ 0.64
PARVB-201ENST00000338758 ZBTB7CA1YPR0 619 aa19.06■□□□□ 0.64
PARVB-201ENST00000338758 DCAF11Q8TEB1 546 aa19.06■□□□□ 0.64
PARVB-201ENST00000338758 NCAPD3P42695 1498 aa19.05■□□□□ 0.64
PARVB-201ENST00000338758 CDCA8Q53HL2 280 aa19.04■□□□□ 0.64
PARVB-201ENST00000338758 POGKQ9P215 609 aa19.03■□□□□ 0.64
PARVB-201ENST00000338758 KANK1Q14678 1352 aa19.02■□□□□ 0.64
PARVB-201ENST00000338758 PKD2Q13563 968 aa19.01■□□□□ 0.63
PARVB-201ENST00000338758 FOXD1Q16676 465 aa19.01■□□□□ 0.63
PARVB-201ENST00000338758 KNSTRNQ9Y448 316 aa19.01■□□□□ 0.63
PARVB-201ENST00000338758 SETD5Q9C0A6 1442 aa18.99■□□□□ 0.63
PARVB-201ENST00000338758 SENP3-EIF4A1A0A087X0R7 540 aa18.99■□□□□ 0.63
PARVB-201ENST00000338758 PPM1GO15355 546 aaPredicted RBP18.97■□□□□ 0.63
PARVB-201ENST00000338758 A0A0G2JS52 829 aa18.97■□□□□ 0.63
PARVB-201ENST00000338758 HNRNPMP52272 730 aaKnown RBP eCLIP18.97■□□□□ 0.63
PARVB-201ENST00000338758 FGD5Q6ZNL6 1462 aa18.96■□□□□ 0.63
PARVB-201ENST00000338758 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
PARVB-201ENST00000338758 IGF1RP08069 1367 aa18.94■□□□□ 0.62
PARVB-201ENST00000338758 NUP155O75694 1391 aa18.93■□□□□ 0.62
PARVB-201ENST00000338758 CYB5RLQ6IPT4 315 aa18.92■□□□□ 0.62
PARVB-201ENST00000338758 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.92■□□□□ 0.62
PARVB-201ENST00000338758 KIF3BO15066 747 aa18.92■□□□□ 0.62
PARVB-201ENST00000338758 LMOD2Q6P5Q4 547 aa18.91■□□□□ 0.62
PARVB-201ENST00000338758 OSCARQ8IYS5 282 aa18.91■□□□□ 0.62
PARVB-201ENST00000338758 CFAP53Q96M91 514 aa18.91■□□□□ 0.62
PARVB-201ENST00000338758 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
PARVB-201ENST00000338758 HAP1P54257 671 aaPredicted RBP18.9■□□□□ 0.62
PARVB-201ENST00000338758 MPHOSPH9Q99550 1183 aa18.9■□□□□ 0.62
PARVB-201ENST00000338758 PTPRGP23470 1445 aa18.9■□□□□ 0.62
PARVB-201ENST00000338758 ANKRD30AQ9BXX3 1397 aa18.9■□□□□ 0.62
PARVB-201ENST00000338758 NPM2Q86SE8 214 aaKnown RBP18.9■□□□□ 0.62
PARVB-201ENST00000338758 RAB3GAP2Q9H2M9 1393 aa18.89■□□□□ 0.62
PARVB-201ENST00000338758 CCDC136Q96JN2 1154 aa18.89■□□□□ 0.61
PARVB-201ENST00000338758 TIMELESSQ9UNS1 1208 aa18.89■□□□□ 0.61
PARVB-201ENST00000338758 SAFB2Q14151 953 aaKnown RBP eCLIP18.88■□□□□ 0.61
PARVB-201ENST00000338758 IRX6P78412 446 aaPredicted RBP18.88■□□□□ 0.61
PARVB-201ENST00000338758 TNNT2P45379 298 aaPredicted RBP18.87■□□□□ 0.61
PARVB-201ENST00000338758 SPAG9O60271 1321 aaKnown RBP18.87■□□□□ 0.61
PARVB-201ENST00000338758 HDGFP51858 240 aaKnown RBP18.86■□□□□ 0.61
PARVB-201ENST00000338758 CCDC18Q5T9S5 1454 aa18.84■□□□□ 0.61
PARVB-201ENST00000338758 AQRO60306 1485 aaKnown RBP eCLIP18.84■□□□□ 0.614e-8■■■■■ 34.1
PARVB-201ENST00000338758 TMF1P82094 1093 aa18.84■□□□□ 0.61
PARVB-201ENST00000338758 RSPH4AQ5TD94 716 aa18.83■□□□□ 0.6
PARVB-201ENST00000338758 ANP32AP39687 249 aaKnown RBP18.83■□□□□ 0.6
PARVB-201ENST00000338758 NEUROD2Q15784 382 aa18.83■□□□□ 0.6
PARVB-201ENST00000338758 CC2D1BQ5T0F9 858 aaKnown RBP18.82■□□□□ 0.6
PARVB-201ENST00000338758 STK26Q9P289 416 aa18.82■□□□□ 0.6
PARVB-201ENST00000338758 SRPK2P78362 688 aaKnown RBP18.8■□□□□ 0.6
PARVB-201ENST00000338758 MYT1Q01538 1121 aa18.8■□□□□ 0.6
PARVB-201ENST00000338758 NESP48681 1621 aa18.79■□□□□ 0.6
PARVB-201ENST00000338758 HSPA5P11021 654 aaKnown RBP18.77■□□□□ 0.6
PARVB-201ENST00000338758 WASHC2CQ9Y4E1 1318 aa18.76■□□□□ 0.59
PARVB-201ENST00000338758 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
PARVB-201ENST00000338758 CFTRP13569 1480 aa18.75■□□□□ 0.59
PARVB-201ENST00000338758 SOX12O15370 315 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms