RNA–Protein interactions for RNA: ENST00000335762.9

CACNA1C-202, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 6,968 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-202ENST00000335762 TPRNQ4KMQ1 711 aa13.76□□□□□ -0.21
CACNA1C-202ENST00000335762 SCAF1Q9H7N4 1312 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-202ENST00000335762 TULP1O00294 542 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-202ENST00000335762 PLEKHG5O94827 1062 aa13.72□□□□□ -0.21
CACNA1C-202ENST00000335762 NRDCO43847 1150 aa13.72□□□□□ -0.21
CACNA1C-202ENST00000335762 GOLGA6L6A8MZA4 724 aa13.71□□□□□ -0.21
CACNA1C-202ENST00000335762 CSRNP3Q8WYN3 585 aa13.71□□□□□ -0.22
CACNA1C-202ENST00000335762 CASC1Q6TDU7 716 aa13.7□□□□□ -0.22
CACNA1C-202ENST00000335762 AMER1Q5JTC6 1135 aaPredicted RBP13.7□□□□□ -0.22
CACNA1C-202ENST00000335762 MIER1Q8N108 512 aa13.68□□□□□ -0.22
CACNA1C-202ENST00000335762 LAS1LQ9Y4W2 734 aaKnown RBP13.68□□□□□ -0.22
CACNA1C-202ENST00000335762 CHAF1AQ13111 956 aaPredicted RBP13.67□□□□□ -0.22
CACNA1C-202ENST00000335762 KDM2AQ9Y2K7 1162 aa13.66□□□□□ -0.22
CACNA1C-202ENST00000335762 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.65□□□□□ -0.22
CACNA1C-202ENST00000335762 CHIC2Q9UKJ5 165 aa13.61□□□□□ -0.23
CACNA1C-202ENST00000335762 NOP58Q9Y2X3 529 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-202ENST00000335762 ZBTB7CA1YPR0 619 aa13.6□□□□□ -0.23
CACNA1C-202ENST00000335762 MSNP26038 577 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-202ENST00000335762 EIF4G2P78344 907 aaKnown RBP eCLIP13.6□□□□□ -0.23
CACNA1C-202ENST00000335762 FTSJ3Q8IY81 847 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-202ENST00000335762 HIRIP3Q9BW71 556 aaPredicted RBP13.59□□□□□ -0.23
CACNA1C-202ENST00000335762 HSP90AB1P08238 724 aaKnown RBP13.58□□□□□ -0.23
CACNA1C-202ENST00000335762 FGD1P98174 961 aa13.58□□□□□ -0.24
CACNA1C-202ENST00000335762 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
CACNA1C-202ENST00000335762 GOLGA6L4A6NEF3 574 aa13.58□□□□□ -0.24
CACNA1C-202ENST00000335762 TAOK2Q9UL54 1235 aa13.58□□□□□ -0.24
CACNA1C-202ENST00000335762 RGS3P49796 1198 aa13.58□□□□□ -0.24
CACNA1C-202ENST00000335762 SUPT16HQ9Y5B9 1047 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-202ENST00000335762 C14orf37Q86TY3 774 aa13.56□□□□□ -0.24
CACNA1C-202ENST00000335762 CFAP53Q96M91 514 aa13.56□□□□□ -0.24
CACNA1C-202ENST00000335762 L1TD1Q5T7N2 865 aaKnown RBP13.56□□□□□ -0.24
CACNA1C-202ENST00000335762 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
CACNA1C-202ENST00000335762 TSPY4P0CV99 314 aa13.55□□□□□ -0.24
CACNA1C-202ENST00000335762 TSPY10P0CW01 314 aa13.55□□□□□ -0.24
CACNA1C-202ENST00000335762 ARID4BQ4LE39 1312 aaPredicted RBP13.54□□□□□ -0.24
CACNA1C-202ENST00000335762 PPP4R2Q9NY27 417 aa13.53□□□□□ -0.24
CACNA1C-202ENST00000335762 TNNT3P45378 269 aaPredicted RBP13.53□□□□□ -0.24
CACNA1C-202ENST00000335762 KCNJ4P48050 445 aa13.52□□□□□ -0.25
CACNA1C-202ENST00000335762 PNNQ9H307 717 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-202ENST00000335762 SENP3-EIF4A1A0A087X0R7 540 aa13.51□□□□□ -0.25
CACNA1C-202ENST00000335762 NCBP3Q53F19 620 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-202ENST00000335762 DRC7Q8IY82 874 aa13.51□□□□□ -0.25
CACNA1C-202ENST00000335762 NAP1L2Q9ULW6 460 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-202ENST00000335762 DEKP35659 375 aaKnown RBP13.5□□□□□ -0.25
CACNA1C-202ENST00000335762 CHMP4BQ9H444 224 aaKnown RBP13.49□□□□□ -0.25
CACNA1C-202ENST00000335762 HSCBQ8IWL3 235 aa13.48□□□□□ -0.25
CACNA1C-202ENST00000335762 NEUROD2Q15784 382 aa13.48□□□□□ -0.25
CACNA1C-202ENST00000335762 FRAT1Q92837 279 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-202ENST00000335762 KNSTRNQ9Y448 316 aa13.47□□□□□ -0.25
CACNA1C-202ENST00000335762 OS9Q13438 667 aaPredicted RBP13.46□□□□□ -0.25
CACNA1C-202ENST00000335762 MAPK8IP3Q9UPT6 1336 aa13.45□□□□□ -0.26
CACNA1C-202ENST00000335762 PPP1R15AO75807 674 aaPredicted RBP13.45□□□□□ -0.26
CACNA1C-202ENST00000335762 CLSTN1O94985 981 aa13.45□□□□□ -0.26
CACNA1C-202ENST00000335762 MS4A1P11836 297 aa13.44□□□□□ -0.26
CACNA1C-202ENST00000335762 KIAA2012Q0VF49 1180 aa13.44□□□□□ -0.26
CACNA1C-202ENST00000335762 CDCA8Q53HL2 280 aa13.44□□□□□ -0.26
CACNA1C-202ENST00000335762 HAP1P54257 671 aaPredicted RBP13.43□□□□□ -0.26
CACNA1C-202ENST00000335762 ARID3AQ99856 593 aa13.43□□□□□ -0.26
CACNA1C-202ENST00000335762 NUDCQ9Y266 331 aa13.42□□□□□ -0.26
CACNA1C-202ENST00000335762 NOC3LQ8WTT2 800 aaKnown RBP13.41□□□□□ -0.26
CACNA1C-202ENST00000335762 MCCP23508 829 aa13.4□□□□□ -0.26
CACNA1C-202ENST00000335762 B4GALNT3Q6L9W6 998 aa13.39□□□□□ -0.27
CACNA1C-202ENST00000335762 NPHP1O15259 732 aa13.39□□□□□ -0.27
CACNA1C-202ENST00000335762 GOLGA2Q08379 1002 aa13.39□□□□□ -0.27
CACNA1C-202ENST00000335762 SPRYD3Q8NCJ5 442 aa13.38□□□□□ -0.27
CACNA1C-202ENST00000335762 RGL3Q3MIN7 710 aa13.38□□□□□ -0.27
CACNA1C-202ENST00000335762 MTUS2Q5JR59 1369 aa13.36□□□□□ -0.27
CACNA1C-202ENST00000335762 GOLGA6L1Q8N7Z2 621 aa13.35□□□□□ -0.27
CACNA1C-202ENST00000335762 GBP4Q96PP9 640 aa13.35□□□□□ -0.27
CACNA1C-202ENST00000335762 RRP7BPQ9NSQ0 103 aa13.35□□□□□ -0.27
CACNA1C-202ENST00000335762 GNL2Q13823 731 aaKnown RBP13.35□□□□□ -0.27
CACNA1C-202ENST00000335762 CFAP44Q96MT7 982 aa13.35□□□□□ -0.27
CACNA1C-202ENST00000335762 PTMSP20962 102 aa13.34□□□□□ -0.27
CACNA1C-202ENST00000335762 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.34□□□□□ -0.27
CACNA1C-202ENST00000335762 DCAF1Q9Y4B6 1507 aa13.33□□□□□ -0.28
CACNA1C-202ENST00000335762 A0A0U1RQG5 324 aaPredicted RBP13.32□□□□□ -0.28
CACNA1C-202ENST00000335762 CARD11Q9BXL7 1154 aa13.32□□□□□ -0.28
CACNA1C-202ENST00000335762 GZF1Q9H116 711 aaPredicted RBP13.32□□□□□ -0.28
CACNA1C-202ENST00000335762 ISY1Q9ULR0 285 aaKnown RBP13.31□□□□□ -0.28
CACNA1C-202ENST00000335762 U2SURPO15042 1029 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-202ENST00000335762 HTATSF1O43719 755 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-202ENST00000335762 RBM19Q9Y4C8 960 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-202ENST00000335762 SYAP1Q96A49 352 aaPredicted RBP13.29□□□□□ -0.28
CACNA1C-202ENST00000335762 PRM3Q9NNZ6 103 aa13.28□□□□□ -0.28
CACNA1C-202ENST00000335762 LMOD2Q6P5Q4 547 aa13.28□□□□□ -0.28
CACNA1C-202ENST00000335762 ABCC9O60706 1549 aa13.28□□□□□ -0.28
CACNA1C-202ENST00000335762 KIAA1211Q6ZU35 1233 aa13.28□□□□□ -0.28
CACNA1C-202ENST00000335762 USP35Q9P2H5 1018 aa13.27□□□□□ -0.28
CACNA1C-202ENST00000335762 TPM4P67936 248 aa13.27□□□□□ -0.28
CACNA1C-202ENST00000335762 GOLGA6L3A6NEY3 463 aa13.26□□□□□ -0.29
CACNA1C-202ENST00000335762 SLKQ9H2G2 1235 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-202ENST00000335762 TRHP20396 242 aaPredicted RBP13.24□□□□□ -0.29
CACNA1C-202ENST00000335762 AEBP2Q6ZN18 517 aaPredicted RBP13.24□□□□□ -0.29
CACNA1C-202ENST00000335762 CCDC34Q96HJ3 373 aa13.24□□□□□ -0.29
CACNA1C-202ENST00000335762 CC2D1BQ5T0F9 858 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-202ENST00000335762 POGKQ9P215 609 aa13.24□□□□□ -0.29
CACNA1C-202ENST00000335762 PDE4CQ08493 712 aa13.23□□□□□ -0.29
CACNA1C-202ENST00000335762 SETQ01105 290 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-202ENST00000335762 HSP90AA2PQ14568 343 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-202ENST00000335762 APBB1O00213 710 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms