RNA–Protein interactions for RNA: ENST00000335110.5

FAT4-201, Transcript of FAT atypical cadherin 4, humanhuman

TSL 1 (best) BASIC

Gene FAT4, Length 9,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAT4-201ENST00000335110 STAG3Q9UJ98 1225 aa13.14□□□□□ -0.31
FAT4-201ENST00000335110 MSNP26038 577 aaKnown RBP13.13□□□□□ -0.31
FAT4-201ENST00000335110 FBLN2P98095 1184 aa13.12□□□□□ -0.31
FAT4-201ENST00000335110 MIER1Q8N108 512 aa13.12□□□□□ -0.31
FAT4-201ENST00000335110 FTSJ3Q8IY81 847 aaKnown RBP13.1□□□□□ -0.31
FAT4-201ENST00000335110 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
FAT4-201ENST00000335110 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
FAT4-201ENST00000335110 P3H3Q8IVL6 736 aa13.07□□□□□ -0.32
FAT4-201ENST00000335110 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
FAT4-201ENST00000335110 HSP90AB1P08238 724 aaKnown RBP13.05□□□□□ -0.32
FAT4-201ENST00000335110 CHGAP10645 457 aaKnown RBP13.05□□□□□ -0.32
FAT4-201ENST00000335110 EIF4G2P78344 907 aaKnown RBP eCLIP13.04□□□□□ -0.32
FAT4-201ENST00000335110 CHMP4BQ9H444 224 aaKnown RBP13.04□□□□□ -0.32
FAT4-201ENST00000335110 SCRIBQ14160 1630 aa13.03□□□□□ -0.32
FAT4-201ENST00000335110 PPP4R2Q9NY27 417 aa13.03□□□□□ -0.32
FAT4-201ENST00000335110 PTMSP20962 102 aa13.03□□□□□ -0.32
FAT4-201ENST00000335110 DEKP35659 375 aaKnown RBP13.02□□□□□ -0.33
FAT4-201ENST00000335110 HSCBQ8IWL3 235 aa13.01□□□□□ -0.33
FAT4-201ENST00000335110 PLCB2Q00722 1185 aa13.01□□□□□ -0.33
FAT4-201ENST00000335110 TPRNQ4KMQ1 711 aa13□□□□□ -0.33
FAT4-201ENST00000335110 CFAP53Q96M91 514 aa13□□□□□ -0.33
FAT4-201ENST00000335110 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
FAT4-201ENST00000335110 DRC7Q8IY82 874 aa12.98□□□□□ -0.33
FAT4-201ENST00000335110 GOLGA6L4A6NEF3 574 aa12.97□□□□□ -0.33
FAT4-201ENST00000335110 TNNT3P45378 269 aaPredicted RBP12.97□□□□□ -0.33
FAT4-201ENST00000335110 SUPT16HQ9Y5B9 1047 aaKnown RBP12.97□□□□□ -0.33
FAT4-201ENST00000335110 MS4A1P11836 297 aa12.96□□□□□ -0.33
FAT4-201ENST00000335110 CDCA8Q53HL2 280 aa12.96□□□□□ -0.34
FAT4-201ENST00000335110 MTUS2Q5JR59 1369 aa12.95□□□□□ -0.34
FAT4-201ENST00000335110 KIAA2012Q0VF49 1180 aa12.95□□□□□ -0.34
FAT4-201ENST00000335110 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
FAT4-201ENST00000335110 FGD1P98174 961 aa12.94□□□□□ -0.34
FAT4-201ENST00000335110 KNSTRNQ9Y448 316 aa12.94□□□□□ -0.34
FAT4-201ENST00000335110 KDM2AQ9Y2K7 1162 aa12.94□□□□□ -0.34
FAT4-201ENST00000335110 CLIP1P30622 1438 aa12.93□□□□□ -0.34
FAT4-201ENST00000335110 RGS3P49796 1198 aa12.93□□□□□ -0.34
FAT4-201ENST00000335110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.34
FAT4-201ENST00000335110 MCCP23508 829 aa12.92□□□□□ -0.34
FAT4-201ENST00000335110 ABCC9O60706 1549 aa12.91□□□□□ -0.34
FAT4-201ENST00000335110 PNNQ9H307 717 aaKnown RBP12.9□□□□□ -0.34
FAT4-201ENST00000335110 NOC3LQ8WTT2 800 aaKnown RBP12.9□□□□□ -0.34
FAT4-201ENST00000335110 GBP4Q96PP9 640 aa12.9□□□□□ -0.34
FAT4-201ENST00000335110 USP35Q9P2H5 1018 aa12.9□□□□□ -0.34
FAT4-201ENST00000335110 GOLGA6L1Q8N7Z2 621 aa12.9□□□□□ -0.35
FAT4-201ENST00000335110 KCNJ4P48050 445 aa12.89□□□□□ -0.35
FAT4-201ENST00000335110 RSF1Q96T23 1441 aaPredicted RBP12.89□□□□□ -0.35
FAT4-201ENST00000335110 CHIC2Q9UKJ5 165 aa12.89□□□□□ -0.35
FAT4-201ENST00000335110 SYAP1Q96A49 352 aaPredicted RBP12.89□□□□□ -0.35
FAT4-201ENST00000335110 TULP1O00294 542 aaPredicted RBP12.88□□□□□ -0.35
FAT4-201ENST00000335110 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
FAT4-201ENST00000335110 TSPY4P0CV99 314 aa12.87□□□□□ -0.35
FAT4-201ENST00000335110 TSPY10P0CW01 314 aa12.87□□□□□ -0.35
FAT4-201ENST00000335110 PABPN1Q86U42 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
FAT4-201ENST00000335110 ARID4BQ4LE39 1312 aaPredicted RBP12.86□□□□□ -0.35
FAT4-201ENST00000335110 A0A0G2JS52 829 aa12.85□□□□□ -0.35
FAT4-201ENST00000335110 OS9Q13438 667 aaPredicted RBP12.85□□□□□ -0.35
FAT4-201ENST00000335110 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
FAT4-201ENST00000335110 HIRIP3Q9BW71 556 aaPredicted RBP12.84□□□□□ -0.35
FAT4-201ENST00000335110 SETQ01105 290 aaPredicted RBP12.84□□□□□ -0.35
FAT4-201ENST00000335110 RSPH6AQ9H0K4 717 aa12.83□□□□□ -0.36
FAT4-201ENST00000335110 NAP1L2Q9ULW6 460 aaPredicted RBP12.83□□□□□ -0.36
FAT4-201ENST00000335110 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.82□□□□□ -0.36
FAT4-201ENST00000335110 GNL2Q13823 731 aaKnown RBP12.81□□□□□ -0.36
FAT4-201ENST00000335110 EEA1Q15075 1411 aa12.81□□□□□ -0.36
FAT4-201ENST00000335110 C14orf37Q86TY3 774 aa12.81□□□□□ -0.36
FAT4-201ENST00000335110 FRAT1Q92837 279 aaPredicted RBP12.8□□□□□ -0.36
FAT4-201ENST00000335110 NUDCQ9Y266 331 aa12.8□□□□□ -0.36
FAT4-201ENST00000335110 HTATSF1O43719 755 aaKnown RBP12.8□□□□□ -0.36
FAT4-201ENST00000335110 HSP90AA2PQ14568 343 aaPredicted RBP12.8□□□□□ -0.36
FAT4-201ENST00000335110 ZCCHC6Q5VYS8 1495 aaKnown RBP12.79□□□□□ -0.36
FAT4-201ENST00000335110 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
FAT4-201ENST00000335110 RBM19Q9Y4C8 960 aaKnown RBP12.79□□□□□ -0.36
FAT4-201ENST00000335110 PHF14O94880 888 aa12.79□□□□□ -0.36
FAT4-201ENST00000335110 TPM4P67936 248 aa12.79□□□□□ -0.36
FAT4-201ENST00000335110 B4GALNT3Q6L9W6 998 aa12.79□□□□□ -0.36
FAT4-201ENST00000335110 PPP1R15AO75807 674 aaPredicted RBP12.79□□□□□ -0.36
FAT4-201ENST00000335110 ARID3AQ99856 593 aa12.79□□□□□ -0.36
FAT4-201ENST00000335110 CLSTN1O94985 981 aa12.78□□□□□ -0.36
FAT4-201ENST00000335110 CEP162Q5TB80 1403 aa12.78□□□□□ -0.36
FAT4-201ENST00000335110 GOLGA6L3A6NEY3 463 aa12.78□□□□□ -0.36
FAT4-201ENST00000335110 GOLGA2Q08379 1002 aa12.77□□□□□ -0.36
FAT4-201ENST00000335110 ZBTB7CA1YPR0 619 aa12.77□□□□□ -0.37
FAT4-201ENST00000335110 TAOK2Q9UL54 1235 aa12.76□□□□□ -0.37
FAT4-201ENST00000335110 A0A0U1RQG5 324 aaPredicted RBP12.76□□□□□ -0.37
FAT4-201ENST00000335110 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
FAT4-201ENST00000335110 CALRP27797 417 aaKnown RBP12.74□□□□□ -0.37
FAT4-201ENST00000335110 KIAA1211Q6ZU35 1233 aa12.74□□□□□ -0.37
FAT4-201ENST00000335110 CSPP1Q1MSJ5 1256 aa12.74□□□□□ -0.37
FAT4-201ENST00000335110 SPRYD3Q8NCJ5 442 aa12.74□□□□□ -0.37
FAT4-201ENST00000335110 CCDC34Q96HJ3 373 aa12.74□□□□□ -0.37
FAT4-201ENST00000335110 CARD11Q9BXL7 1154 aa12.74□□□□□ -0.37
FAT4-201ENST00000335110 RRP7BPQ9NSQ0 103 aa12.73□□□□□ -0.37
FAT4-201ENST00000335110 GZF1Q9H116 711 aaPredicted RBP12.72□□□□□ -0.37
FAT4-201ENST00000335110 NEUROD2Q15784 382 aa12.71□□□□□ -0.37
FAT4-201ENST00000335110 HAP1P54257 671 aaPredicted RBP12.71□□□□□ -0.38
FAT4-201ENST00000335110 CCER2I3L3R5 266 aa12.7□□□□□ -0.38
FAT4-201ENST00000335110 TCERG1O14776 1098 aaKnown RBP12.7□□□□□ -0.38
FAT4-201ENST00000335110 NPHP1O15259 732 aa12.69□□□□□ -0.38
FAT4-201ENST00000335110 DDX11L8A8MPP1 907 aa12.68□□□□□ -0.38
FAT4-201ENST00000335110 IPO9Q96P70 1041 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms