RNA–Protein interactions for RNA: ENST00000334211.12

ARAP1-201, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARAP1, Length 4,942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-201ENST00000334211 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.55■□□□□ 0.56
ARAP1-201ENST00000334211 WDR43Q15061 677 aaKnown RBP eCLIP18.54■□□□□ 0.56
ARAP1-201ENST00000334211 CFDP1Q9UEE9 299 aaPredicted RBP18.54■□□□□ 0.56
ARAP1-201ENST00000334211 MIER1Q8N108 512 aa18.53■□□□□ 0.56
ARAP1-201ENST00000334211 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.55
ARAP1-201ENST00000334211 BCL11AQ9H165 835 aa18.52■□□□□ 0.55
ARAP1-201ENST00000334211 FHAD1B1AJZ9 1412 aa18.51■□□□□ 0.55
ARAP1-201ENST00000334211 KCNH8Q96L42 1107 aa18.49■□□□□ 0.55
ARAP1-201ENST00000334211 SOGA1O94964 1423 aa18.49■□□□□ 0.55
ARAP1-201ENST00000334211 UPF2Q9HAU5 1272 aaKnown RBP18.47■□□□□ 0.55
ARAP1-201ENST00000334211 CCDC136Q96JN2 1154 aa18.47■□□□□ 0.55
ARAP1-201ENST00000334211 WIZO95785 1651 aa18.47■□□□□ 0.55
ARAP1-201ENST00000334211 SALL2Q9Y467 1007 aaPredicted RBP18.46■□□□□ 0.55
ARAP1-201ENST00000334211 CARMIL1Q5VZK9 1371 aa18.46■□□□□ 0.55
ARAP1-201ENST00000334211 NPM2Q86SE8 214 aaKnown RBP18.46■□□□□ 0.55
ARAP1-201ENST00000334211 HIRIP3Q9BW71 556 aaPredicted RBP18.43■□□□□ 0.54
ARAP1-201ENST00000334211 CUX2O14529 1486 aa18.42■□□□□ 0.54
ARAP1-201ENST00000334211 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
ARAP1-201ENST00000334211 CDCA8Q53HL2 280 aa18.41■□□□□ 0.54
ARAP1-201ENST00000334211 TOP2AP11388 1531 aaKnown RBP18.41■□□□□ 0.54
ARAP1-201ENST00000334211 CCNB3Q8WWL7 1395 aa18.4■□□□□ 0.54
ARAP1-201ENST00000334211 ERCC6Q03468 1493 aa18.39■□□□□ 0.53
ARAP1-201ENST00000334211 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
ARAP1-201ENST00000334211 TIMELESSQ9UNS1 1208 aa18.37■□□□□ 0.53
ARAP1-201ENST00000334211 PLPPR3Q6T4P5 718 aa18.36■□□□□ 0.53
ARAP1-201ENST00000334211 RGL3Q3MIN7 710 aa18.35■□□□□ 0.53
ARAP1-201ENST00000334211 HSP90AA1P07900 732 aaKnown RBP18.34■□□□□ 0.53
ARAP1-201ENST00000334211 VPS8Q8N3P4 1428 aa18.33■□□□□ 0.53
ARAP1-201ENST00000334211 PPP1R15AO75807 674 aaPredicted RBP18.32■□□□□ 0.52
ARAP1-201ENST00000334211 CARD11Q9BXL7 1154 aa18.31■□□□□ 0.52
ARAP1-201ENST00000334211 KNSTRNQ9Y448 316 aa18.27■□□□□ 0.52
ARAP1-201ENST00000334211 CFAP53Q96M91 514 aa18.27■□□□□ 0.51
ARAP1-201ENST00000334211 SIN3AQ96ST3 1273 aa18.26■□□□□ 0.51
ARAP1-201ENST00000334211 ANP32BQ92688 251 aaKnown RBP18.26■□□□□ 0.51
ARAP1-201ENST00000334211 PDS5BQ9NTI5 1447 aa18.25■□□□□ 0.51
ARAP1-201ENST00000334211 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
ARAP1-201ENST00000334211 SCAF1Q9H7N4 1312 aaKnown RBP18.24■□□□□ 0.51
ARAP1-201ENST00000334211 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
ARAP1-201ENST00000334211 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
ARAP1-201ENST00000334211 SETD5Q9C0A6 1442 aa18.19■□□□□ 0.5
ARAP1-201ENST00000334211 ARHGAP35Q9NRY4 1499 aa18.19■□□□□ 0.5
ARAP1-201ENST00000334211 IRX6P78412 446 aaPredicted RBP18.18■□□□□ 0.5
ARAP1-201ENST00000334211 FMN1Q68DA7 1419 aa18.17■□□□□ 0.5
ARAP1-201ENST00000334211 CARMIL2Q6F5E8 1435 aa18.16■□□□□ 0.5
ARAP1-201ENST00000334211 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
ARAP1-201ENST00000334211 KANK1Q14678 1352 aa18.13■□□□□ 0.49
ARAP1-201ENST00000334211 CADPSQ9ULU8 1353 aa18.12■□□□□ 0.49
ARAP1-201ENST00000334211 KANK4Q5T7N3 995 aaPredicted RBP18.11■□□□□ 0.49
ARAP1-201ENST00000334211 ARID4BQ4LE39 1312 aaPredicted RBP18.11■□□□□ 0.49
ARAP1-201ENST00000334211 NUDCQ9Y266 331 aa18.1■□□□□ 0.49
ARAP1-201ENST00000334211 TMF1P82094 1093 aa18.09■□□□□ 0.49
ARAP1-201ENST00000334211 TDRD9Q8NDG6 1382 aaKnown RBP18.09■□□□□ 0.49
ARAP1-201ENST00000334211 DCAF11Q8TEB1 546 aa18.08■□□□□ 0.48
ARAP1-201ENST00000334211 DDRGK1Q96HY6 314 aa18.07■□□□□ 0.48
ARAP1-201ENST00000334211 POGKQ9P215 609 aa18.07■□□□□ 0.48
ARAP1-201ENST00000334211 SUPT16HQ9Y5B9 1047 aaKnown RBP18.07■□□□□ 0.48
ARAP1-201ENST00000334211 C14orf37Q86TY3 774 aa18.06■□□□□ 0.48
ARAP1-201ENST00000334211 CCER2I3L3R5 266 aa18.06■□□□□ 0.48
ARAP1-201ENST00000334211 RUSC2Q8N2Y8 1516 aa18.06■□□□□ 0.48
ARAP1-201ENST00000334211 BECN1Q14457 450 aa18.04■□□□□ 0.48
ARAP1-201ENST00000334211 MAPK8IP3Q9UPT6 1336 aa18.04■□□□□ 0.48
ARAP1-201ENST00000334211 SENP3Q9H4L4 574 aaPredicted RBP18.04■□□□□ 0.48
ARAP1-201ENST00000334211 RAPGEF2Q9Y4G8 1499 aa18.04■□□□□ 0.48
ARAP1-201ENST00000334211 PPP4R2Q9NY27 417 aa18.02■□□□□ 0.48
ARAP1-201ENST00000334211 EIF5BO60841 1220 aaKnown RBP18.02■□□□□ 0.47
ARAP1-201ENST00000334211 PKD2Q13563 968 aa18.01■□□□□ 0.47
ARAP1-201ENST00000334211 RAB3GAP2Q9H2M9 1393 aa18■□□□□ 0.47
ARAP1-201ENST00000334211 HDGFP51858 240 aaKnown RBP18■□□□□ 0.47
ARAP1-201ENST00000334211 PPM1GO15355 546 aaPredicted RBP18■□□□□ 0.47
ARAP1-201ENST00000334211 EFCAB2Q5VUJ9 269 aa17.99■□□□□ 0.47
ARAP1-201ENST00000334211 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
ARAP1-201ENST00000334211 NBR1Q14596 966 aa17.98■□□□□ 0.47
ARAP1-201ENST00000334211 FTSJ3Q8IY81 847 aaKnown RBP17.98■□□□□ 0.47
ARAP1-201ENST00000334211 ZBTB7CA1YPR0 619 aa17.98■□□□□ 0.47
ARAP1-201ENST00000334211 ANKRD30AQ9BXX3 1397 aa17.98■□□□□ 0.47
ARAP1-201ENST00000334211 CHMP4BQ9H444 224 aaKnown RBP17.98■□□□□ 0.47
ARAP1-201ENST00000334211 MS4A1P11836 297 aa17.97■□□□□ 0.47
ARAP1-201ENST00000334211 HSPA5P11021 654 aaKnown RBP17.97■□□□□ 0.47
ARAP1-201ENST00000334211 MPHOSPH9Q99550 1183 aa17.96■□□□□ 0.47
ARAP1-201ENST00000334211 CC2D1BQ5T0F9 858 aaKnown RBP17.96■□□□□ 0.47
ARAP1-201ENST00000334211 ANP32EQ9BTT0 268 aa17.95■□□□□ 0.46
ARAP1-201ENST00000334211 NEUROD2Q15784 382 aa17.95■□□□□ 0.46
ARAP1-201ENST00000334211 RSPH4AQ5TD94 716 aa17.95■□□□□ 0.46
ARAP1-201ENST00000334211 NUP155O75694 1391 aa17.92■□□□□ 0.46
ARAP1-201ENST00000334211 SENP3-EIF4A1A0A087X0R7 540 aa17.89■□□□□ 0.46
ARAP1-201ENST00000334211 FHOD3Q2V2M9 1422 aa17.89■□□□□ 0.46
ARAP1-201ENST00000334211 CCDC18Q5T9S5 1454 aa17.88■□□□□ 0.45
ARAP1-201ENST00000334211 HAP1P54257 671 aaPredicted RBP17.88■□□□□ 0.45
ARAP1-201ENST00000334211 CASC1Q6TDU7 716 aa17.88■□□□□ 0.45
ARAP1-201ENST00000334211 GOLGA6L22H0YM25 854 aa17.87■□□□□ 0.45
ARAP1-201ENST00000334211 U2SURPO15042 1029 aaKnown RBP17.87■□□□□ 0.45
ARAP1-201ENST00000334211 TNNT2P45379 298 aaPredicted RBP17.87■□□□□ 0.45
ARAP1-201ENST00000334211 PLEKHG5O94827 1062 aa17.87■□□□□ 0.45
ARAP1-201ENST00000334211 GGT6Q6P531 493 aa17.87■□□□□ 0.45
ARAP1-201ENST00000334211 KTN1Q86UP2 1357 aaKnown RBP17.86■□□□□ 0.45
ARAP1-201ENST00000334211 A0A0G2JS52 829 aa17.86■□□□□ 0.45
ARAP1-201ENST00000334211 MORC1Q86VD1 984 aa17.86■□□□□ 0.45
ARAP1-201ENST00000334211 LAS1LQ9Y4W2 734 aaKnown RBP17.86■□□□□ 0.45
ARAP1-201ENST00000334211 SRPK2P78362 688 aaKnown RBP17.85■□□□□ 0.45
ARAP1-201ENST00000334211 FOXD1Q16676 465 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms